RNA–Protein interactions for RNA: ENST00000397023.5

PPARG-208, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 5

Gene PPARG, Length 2,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-208ENST00000397023 NLRP13Q86W25 1043 aa12.78□□□□□ -0.36
PPARG-208ENST00000397023 NEFMP07197 916 aa12.77□□□□□ -0.37
PPARG-208ENST00000397023 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
PPARG-208ENST00000397023 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
PPARG-208ENST00000397023 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
PPARG-208ENST00000397023 LAMC1P11047 1609 aa12.76□□□□□ -0.37
PPARG-208ENST00000397023 PARD3Q8TEW0 1356 aa12.76□□□□□ -0.37
PPARG-208ENST00000397023 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
PPARG-208ENST00000397023 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
PPARG-208ENST00000397023 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
PPARG-208ENST00000397023 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
PPARG-208ENST00000397023 ANKRD50Q9ULJ7 1429 aa12.75□□□□□ -0.37
PPARG-208ENST00000397023 EXOC6Q8TAG9 804 aa12.74□□□□□ -0.37
PPARG-208ENST00000397023 PKD2Q13563 968 aa12.74□□□□□ -0.37
PPARG-208ENST00000397023 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
PPARG-208ENST00000397023 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
PPARG-208ENST00000397023 NUP160Q12769 1436 aa12.73□□□□□ -0.37
PPARG-208ENST00000397023 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
PPARG-208ENST00000397023 CFDP1Q9UEE9 299 aaPredicted RBP12.72□□□□□ -0.37
PPARG-208ENST00000397023 ZNF326Q5BKZ1 582 aaKnown RBP12.71□□□□□ -0.37
PPARG-208ENST00000397023 CHMP7Q8WUX9 453 aaPredicted RBP12.71□□□□□ -0.37
PPARG-208ENST00000397023 PTPRGP23470 1445 aa12.71□□□□□ -0.37
PPARG-208ENST00000397023 TRPM1Q7Z4N2 1603 aa12.71□□□□□ -0.38
PPARG-208ENST00000397023 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.38
PPARG-208ENST00000397023 PLB1Q6P1J6 1458 aa12.7□□□□□ -0.38
PPARG-208ENST00000397023 PRG4Q92954 1404 aaPredicted RBP12.69□□□□□ -0.38
PPARG-208ENST00000397023 EIF2AK4Q9P2K8 1649 aaKnown RBP12.69□□□□□ -0.38
PPARG-208ENST00000397023 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
PPARG-208ENST00000397023 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
PPARG-208ENST00000397023 ARHGEF5Q12774 1597 aa12.68□□□□□ -0.38
PPARG-208ENST00000397023 C9orf84Q5VXU9 1444 aa12.68□□□□□ -0.38
PPARG-208ENST00000397023 CARMIL2Q6F5E8 1435 aa12.68□□□□□ -0.38
PPARG-208ENST00000397023 NUP155O75694 1391 aa12.68□□□□□ -0.38
PPARG-208ENST00000397023 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
PPARG-208ENST00000397023 GSE1Q14687 1217 aa12.67□□□□□ -0.38
PPARG-208ENST00000397023 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
PPARG-208ENST00000397023 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
PPARG-208ENST00000397023 GPRASP1Q5JY77 1395 aa12.67□□□□□ -0.38
PPARG-208ENST00000397023 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
PPARG-208ENST00000397023 CENPQQ7L2Z9 268 aaPredicted RBP12.66□□□□□ -0.38
PPARG-208ENST00000397023 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
PPARG-208ENST00000397023 ABCA8O94911 1581 aa12.65□□□□□ -0.38
PPARG-208ENST00000397023 PRDM15P57071 1507 aaPredicted RBP12.65□□□□□ -0.38
PPARG-208ENST00000397023 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
PPARG-208ENST00000397023 PIAS4Q8N2W9 510 aaPredicted RBP12.64□□□□□ -0.39
PPARG-208ENST00000397023 CNGB1Q14028 1251 aaPredicted RBP12.64□□□□□ -0.39
PPARG-208ENST00000397023 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
PPARG-208ENST00000397023 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
PPARG-208ENST00000397023 CLASP1Q7Z460 1538 aa12.63□□□□□ -0.39
PPARG-208ENST00000397023 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
PPARG-208ENST00000397023 FBLN2P98095 1184 aa12.62□□□□□ -0.39
PPARG-208ENST00000397023 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
PPARG-208ENST00000397023 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
PPARG-208ENST00000397023 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
PPARG-208ENST00000397023 PER1O15534 1290 aaPredicted RBP12.61□□□□□ -0.39
PPARG-208ENST00000397023 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
PPARG-208ENST00000397023 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
PPARG-208ENST00000397023 VIRMAQ69YN4 1812 aaKnown RBP12.61□□□□□ -0.39
PPARG-208ENST00000397023 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
PPARG-208ENST00000397023 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
PPARG-208ENST00000397023 ABCC10Q5T3U5 1492 aa12.61□□□□□ -0.39
PPARG-208ENST00000397023 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
PPARG-208ENST00000397023 ATP10BO94823 1461 aa12.6□□□□□ -0.39
PPARG-208ENST00000397023 TSPY4P0CV99 314 aa12.6□□□□□ -0.39
PPARG-208ENST00000397023 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
PPARG-208ENST00000397023 UNC13BO14795 1591 aa12.59□□□□□ -0.39
PPARG-208ENST00000397023 RSPH4AQ5TD94 716 aa12.58□□□□□ -0.4
PPARG-208ENST00000397023 CCDC141Q6ZP82 1450 aa12.58□□□□□ -0.4
PPARG-208ENST00000397023 ERBINQ96RT1 1412 aa12.57□□□□□ -0.4
PPARG-208ENST00000397023 RNF17Q9BXT8 1623 aaKnown RBP12.57□□□□□ -0.4
PPARG-208ENST00000397023 ZNF777Q9ULD5 760 aaPredicted RBP12.57□□□□□ -0.4
PPARG-208ENST00000397023 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
PPARG-208ENST00000397023 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
PPARG-208ENST00000397023 PLEKHD1A6NEE1 506 aa12.56□□□□□ -0.4
PPARG-208ENST00000397023 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
PPARG-208ENST00000397023 TMF1P82094 1093 aa12.55□□□□□ -0.4
PPARG-208ENST00000397023 KDM2AQ9Y2K7 1162 aa12.55□□□□□ -0.4
PPARG-208ENST00000397023 NINLQ9Y2I6 1382 aa12.55□□□□□ -0.4
PPARG-208ENST00000397023 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
PPARG-208ENST00000397023 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
PPARG-208ENST00000397023 ATP10AO60312 1499 aa12.54□□□□□ -0.4
PPARG-208ENST00000397023 FAM43AQ8N2R8 423 aa12.54□□□□□ -0.4
PPARG-208ENST00000397023 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
PPARG-208ENST00000397023 A2MP01023 1474 aa12.53□□□□□ -0.4
PPARG-208ENST00000397023 SYNMO15061 1565 aa12.53□□□□□ -0.4
PPARG-208ENST00000397023 PLIN1O60240 522 aa12.53□□□□□ -0.4
PPARG-208ENST00000397023 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
PPARG-208ENST00000397023 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
PPARG-208ENST00000397023 PREX2Q70Z35 1606 aa12.53□□□□□ -0.4
PPARG-208ENST00000397023 PIK3C2GO75747 1445 aa12.52□□□□□ -0.4
PPARG-208ENST00000397023 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.4
PPARG-208ENST00000397023 PLXNC1O60486 1568 aa12.52□□□□□ -0.41
PPARG-208ENST00000397023 ABCC2Q92887 1545 aa12.52□□□□□ -0.41
PPARG-208ENST00000397023 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.41
PPARG-208ENST00000397023 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPARG-208ENST00000397023 TESK2Q96S53 571 aa12.52□□□□□ -0.41
PPARG-208ENST00000397023 ZMYM3Q14202 1370 aa12.51□□□□□ -0.41
PPARG-208ENST00000397023 DISP3Q9P2K9 1392 aa12.51□□□□□ -0.41
PPARG-208ENST00000397023 NPC1L1Q9UHC9 1359 aa12.51□□□□□ -0.41
PPARG-208ENST00000397023 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms