RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PLIN1O60240 522 aa31.85■■■□□ 2.69
CSNK1E-203ENST00000396832 HNRNPMP52272 730 aaKnown RBP eCLIP31.85■■■□□ 2.69
CSNK1E-203ENST00000396832 ROCK2O75116 1388 aaKnown RBP31.84■■■□□ 2.69
CSNK1E-203ENST00000396832 WASHC2CQ9Y4E1 1318 aa31.84■■■□□ 2.69
CSNK1E-203ENST00000396832 RALGAPBQ86X10 1494 aa31.84■■■□□ 2.69
CSNK1E-203ENST00000396832 GRIN2AQ12879 1464 aa31.84■■■□□ 2.69
CSNK1E-203ENST00000396832 PPM1GO15355 546 aaPredicted RBP31.84■■■□□ 2.69
CSNK1E-203ENST00000396832 RCAN3Q9UKA8 241 aa31.84■■■□□ 2.69
CSNK1E-203ENST00000396832 ITSN2Q9NZM3 1697 aa31.83■■■□□ 2.69
CSNK1E-203ENST00000396832 CC2D1BQ5T0F9 858 aaKnown RBP31.82■■■□□ 2.68
CSNK1E-203ENST00000396832 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.81■■■□□ 2.68
CSNK1E-203ENST00000396832 CROCC2H7BZ55 1655 aa31.79■■■□□ 2.68
CSNK1E-203ENST00000396832 LRPPRCP42704 1394 aaKnown RBP31.79■■■□□ 2.68
CSNK1E-203ENST00000396832 C9orf84Q5VXU9 1444 aa31.79■■■□□ 2.68
CSNK1E-203ENST00000396832 ARID4BQ4LE39 1312 aaPredicted RBP31.78■■■□□ 2.68
CSNK1E-203ENST00000396832 MS4A1P11836 297 aa31.78■■■□□ 2.68
CSNK1E-203ENST00000396832 ADGRL2O95490 1459 aa31.77■■■□□ 2.68
CSNK1E-203ENST00000396832 TSPY4P0CV99 314 aa31.77■■■□□ 2.68
CSNK1E-203ENST00000396832 TSPY10P0CW01 314 aa31.77■■■□□ 2.68
CSNK1E-203ENST00000396832 NBPF1Q3BBV0 1214 aa31.77■■■□□ 2.68
CSNK1E-203ENST00000396832 BRD4O60885 1362 aaPredicted RBP31.76■■■□□ 2.67
CSNK1E-203ENST00000396832 PLEKHD1A6NEE1 506 aa31.74■■■□□ 2.67
CSNK1E-203ENST00000396832 RALBP1Q15311 655 aa31.74■■■□□ 2.67
CSNK1E-203ENST00000396832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.74■■■□□ 2.671e-6■■■□□ 14.6
CSNK1E-203ENST00000396832 UHRF1BP1Q6BDS2 1440 aa31.74■■■□□ 2.67
CSNK1E-203ENST00000396832 KTN1Q86UP2 1357 aaKnown RBP31.68■■■□□ 2.66
CSNK1E-203ENST00000396832 NLRP13Q86W25 1043 aa31.68■■■□□ 2.66
CSNK1E-203ENST00000396832 CDC42BPAQ5VT25 1732 aa31.67■■■□□ 2.66
CSNK1E-203ENST00000396832 JPH4Q96JJ6 628 aa31.67■■■□□ 2.66
CSNK1E-203ENST00000396832 BRPF3Q9ULD4 1205 aa31.67■■■□□ 2.66
CSNK1E-203ENST00000396832 CEP170Q5SW79 1584 aa31.66■■■□□ 2.66
CSNK1E-203ENST00000396832 GSE1Q14687 1217 aa31.64■■■□□ 2.66
CSNK1E-203ENST00000396832 DDRGK1Q96HY6 314 aa31.63■■■□□ 2.65
CSNK1E-203ENST00000396832 ARHGEF12Q9NZN5 1544 aa31.61■■■□□ 2.65
CSNK1E-203ENST00000396832 CRBNQ96SW2 442 aa31.59■■■□□ 2.65
CSNK1E-203ENST00000396832 ADCY10Q96PN6 1610 aa31.59■■■□□ 2.65
CSNK1E-203ENST00000396832 E9PCH4 1651 aa31.57■■■□□ 2.64
CSNK1E-203ENST00000396832 PARD3Q8TEW0 1356 aa31.57■■■□□ 2.64
CSNK1E-203ENST00000396832 DISP3Q9P2K9 1392 aa31.57■■■□□ 2.64
CSNK1E-203ENST00000396832 PANK3Q9H999 370 aa31.56■■■□□ 2.64
CSNK1E-203ENST00000396832 NFKBIBQ15653 356 aa31.56■■■□□ 2.64
CSNK1E-203ENST00000396832 C20orf194Q5TEA3 1177 aa31.56■■■□□ 2.64
CSNK1E-203ENST00000396832 MAGI1Q96QZ7 1491 aaPredicted RBP31.55■■■□□ 2.64
CSNK1E-203ENST00000396832 CARMIL2Q6F5E8 1435 aa31.55■■■□□ 2.64
CSNK1E-203ENST00000396832 SYNJ2O15056 1496 aa31.55■■■□□ 2.64
CSNK1E-203ENST00000396832 PER1O15534 1290 aaPredicted RBP31.55■■■□□ 2.64
CSNK1E-203ENST00000396832 CCDC144AA2RUR9 1427 aa31.54■■■□□ 2.64
CSNK1E-203ENST00000396832 PDE3BQ13370 1112 aa31.54■■■□□ 2.64
CSNK1E-203ENST00000396832 ATP10BO94823 1461 aa31.52■■■□□ 2.64
CSNK1E-203ENST00000396832 KDM5DQ9BY66 1539 aa31.51■■■□□ 2.63
CSNK1E-203ENST00000396832 ABCC10Q5T3U5 1492 aa31.51■■■□□ 2.63
CSNK1E-203ENST00000396832 PRAG1Q86YV5 1406 aa31.51■■■□□ 2.63
CSNK1E-203ENST00000396832 SLC4A3P48751 1232 aa31.5■■■□□ 2.63
CSNK1E-203ENST00000396832 FAM135AQ9P2D6 1515 aa31.5■■■□□ 2.63
CSNK1E-203ENST00000396832 FRAT1Q92837 279 aaPredicted RBP31.49■■■□□ 2.63
CSNK1E-203ENST00000396832 SHANK2Q9UPX8 1470 aa31.47■■■□□ 2.63
CSNK1E-203ENST00000396832 TRPM1Q7Z4N2 1603 aa31.44■■■□□ 2.62
CSNK1E-203ENST00000396832 DAXXQ9UER7 740 aaPredicted RBP31.44■■■□□ 2.62
CSNK1E-203ENST00000396832 UBE2Q2Q8WVN8 375 aa31.43■■■□□ 2.62
CSNK1E-203ENST00000396832 TESK2Q96S53 571 aa31.43■■■□□ 2.62
CSNK1E-203ENST00000396832 ADAMTS8Q9UP79 889 aa31.42■■■□□ 2.62
CSNK1E-203ENST00000396832 PTPRGP23470 1445 aa31.42■■■□□ 2.62
CSNK1E-203ENST00000396832 A2MP01023 1474 aa31.4■■■□□ 2.62
CSNK1E-203ENST00000396832 ABCA8O94911 1581 aa31.39■■■□□ 2.62
CSNK1E-203ENST00000396832 EIF5BO60841 1220 aaKnown RBP31.38■■■□□ 2.61
CSNK1E-203ENST00000396832 COL17A1Q9UMD9 1497 aaPredicted RBP31.37■■■□□ 2.61
CSNK1E-203ENST00000396832 PLA2R1Q13018 1463 aa31.36■■■□□ 2.61
CSNK1E-203ENST00000396832 ERBINQ96RT1 1412 aa31.35■■■□□ 2.61
CSNK1E-203ENST00000396832 CCDC141Q6ZP82 1450 aa31.34■■■□□ 2.61
CSNK1E-203ENST00000396832 SAMD9LQ8IVG5 1584 aa31.34■■■□□ 2.61
CSNK1E-203ENST00000396832 TMF1P82094 1093 aa31.34■■■□□ 2.61
CSNK1E-203ENST00000396832 SYCP2Q9BX26 1530 aa31.31■■■□□ 2.6
CSNK1E-203ENST00000396832 BLMP54132 1417 aaPredicted RBP31.3■■■□□ 2.6
CSNK1E-203ENST00000396832 CCDC146Q8IYE0 955 aa31.3■■■□□ 2.6
CSNK1E-203ENST00000396832 NUP160Q12769 1436 aa31.3■■■□□ 2.6
CSNK1E-203ENST00000396832 PLEKHH1Q9ULM0 1364 aa31.28■■■□□ 2.6
CSNK1E-203ENST00000396832 RGS3P49796 1198 aa31.28■■■□□ 2.6
CSNK1E-203ENST00000396832 WDR43Q15061 677 aaKnown RBP eCLIP31.28■■■□□ 2.6
CSNK1E-203ENST00000396832 CDC42BPBQ9Y5S2 1711 aa31.27■■■□□ 2.6
CSNK1E-203ENST00000396832 KDM2BQ8NHM5 1336 aa31.27■■■□□ 2.6
CSNK1E-203ENST00000396832 PLEKHH2Q8IVE3 1493 aa31.26■■■□□ 2.59
CSNK1E-203ENST00000396832 FRAT2O75474 233 aaPredicted RBP31.26■■■□□ 2.59
CSNK1E-203ENST00000396832 MYO5CQ9NQX4 1742 aa31.25■■■□□ 2.59
CSNK1E-203ENST00000396832 FAM161AQ3B820 660 aa31.24■■■□□ 2.59
CSNK1E-203ENST00000396832 KNSTRNQ9Y448 316 aa31.24■■■□□ 2.59
CSNK1E-203ENST00000396832 ARHGEF5Q12774 1597 aa31.23■■■□□ 2.59
CSNK1E-203ENST00000396832 GPRASP1Q5JY77 1395 aa31.22■■■□□ 2.59
CSNK1E-203ENST00000396832 CENPQQ7L2Z9 268 aaPredicted RBP31.22■■■□□ 2.59
CSNK1E-203ENST00000396832 PRDM15P57071 1507 aaPredicted RBP31.22■■■□□ 2.59
CSNK1E-203ENST00000396832 C8orf34Q49A92 452 aa31.22■■■□□ 2.59
CSNK1E-203ENST00000396832 ARHGAP5Q13017 1502 aa31.22■■■□□ 2.59
CSNK1E-203ENST00000396832 PPP2R1AP30153 589 aa31.21■■■□□ 2.59
CSNK1E-203ENST00000396832 ZMYM4Q5VZL5 1548 aa31.21■■■□□ 2.59
CSNK1E-203ENST00000396832 DUSP27Q5VZP5 1158 aa31.2■■■□□ 2.58
CSNK1E-203ENST00000396832 MAGI2Q86UL8 1455 aa31.18■■■□□ 2.58
CSNK1E-203ENST00000396832 FAM43AQ8N2R8 423 aa31.16■■■□□ 2.58
CSNK1E-203ENST00000396832 PREX2Q70Z35 1606 aa31.14■■■□□ 2.58
CSNK1E-203ENST00000396832 RSPH6AQ9H0K4 717 aa31.14■■■□□ 2.58
CSNK1E-203ENST00000396832 SPINK5Q9NQ38 1064 aaPredicted RBP31.13■■■□□ 2.57
CSNK1E-203ENST00000396832 TTC37Q6PGP7 1564 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms