RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 SPAG9O60271 1321 aaKnown RBP19.86■□□□□ 0.77
MKS1-203ENST00000393120 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
MKS1-203ENST00000393120 DCAF11Q8TEB1 546 aa19.84■□□□□ 0.77
MKS1-203ENST00000393120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.771e-8■■■■■ 27.4
MKS1-203ENST00000393120 FANCAO15360 1455 aa19.83■□□□□ 0.77
MKS1-203ENST00000393120 ASXL2Q76L83 1435 aa19.83■□□□□ 0.76
MKS1-203ENST00000393120 ZFYVE16Q7Z3T8 1539 aa19.82■□□□□ 0.76
MKS1-203ENST00000393120 AFAP1Q8N556 730 aa19.82■□□□□ 0.76
MKS1-203ENST00000393120 CARD11Q9BXL7 1154 aa19.8■□□□□ 0.76
MKS1-203ENST00000393120 PRKRIP1Q9H875 184 aaPredicted RBP19.8■□□□□ 0.76
MKS1-203ENST00000393120 PRAG1Q86YV5 1406 aa19.79■□□□□ 0.76
MKS1-203ENST00000393120 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
MKS1-203ENST00000393120 BCORL1Q5H9F3 1711 aa19.77■□□□□ 0.76
MKS1-203ENST00000393120 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
MKS1-203ENST00000393120 INO80Q9ULG1 1556 aaPredicted RBP19.76■□□□□ 0.75
MKS1-203ENST00000393120 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
MKS1-203ENST00000393120 ATP7AQ04656 1500 aa19.75■□□□□ 0.75
MKS1-203ENST00000393120 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
MKS1-203ENST00000393120 A2MP01023 1474 aa19.75■□□□□ 0.75
MKS1-203ENST00000393120 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
MKS1-203ENST00000393120 GPRASP1Q5JY77 1395 aa19.75■□□□□ 0.75
MKS1-203ENST00000393120 DEPDC5O75140 1603 aa19.74■□□□□ 0.75
MKS1-203ENST00000393120 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
MKS1-203ENST00000393120 SUPT16HQ9Y5B9 1047 aaKnown RBP19.74■□□□□ 0.75
MKS1-203ENST00000393120 TRPM1Q7Z4N2 1603 aa19.72■□□□□ 0.75
MKS1-203ENST00000393120 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
MKS1-203ENST00000393120 PTPRTO14522 1441 aa19.71■□□□□ 0.75
MKS1-203ENST00000393120 ST20-MTHFSA0A0A6YYL1 179 aa19.7■□□□□ 0.74
MKS1-203ENST00000393120 VWDEQ8N2E2 1590 aa19.7■□□□□ 0.74
MKS1-203ENST00000393120 LAMC1P11047 1609 aa19.7■□□□□ 0.74
MKS1-203ENST00000393120 RGL3Q3MIN7 710 aa19.69■□□□□ 0.74
MKS1-203ENST00000393120 STAC3Q96MF2 364 aa19.69■□□□□ 0.74
MKS1-203ENST00000393120 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
MKS1-203ENST00000393120 KANK1Q14678 1352 aa19.68■□□□□ 0.74
MKS1-203ENST00000393120 TRPM2O94759 1503 aa19.68■□□□□ 0.74
MKS1-203ENST00000393120 E9PCH4 1651 aa19.67■□□□□ 0.74
MKS1-203ENST00000393120 TET3O43151 1660 aa19.66■□□□□ 0.74
MKS1-203ENST00000393120 ZNF518AQ6AHZ1 1483 aa19.65■□□□□ 0.74
MKS1-203ENST00000393120 CCDC184Q52MB2 194 aa19.65■□□□□ 0.74
MKS1-203ENST00000393120 PRDM15P57071 1507 aaPredicted RBP19.64■□□□□ 0.73
MKS1-203ENST00000393120 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.73
MKS1-203ENST00000393120 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.73
MKS1-203ENST00000393120 CD109Q6YHK3 1445 aa19.63■□□□□ 0.73
MKS1-203ENST00000393120 MRS2Q9HD23 443 aa19.63■□□□□ 0.73
MKS1-203ENST00000393120 NBPF1Q3BBV0 1214 aa19.63■□□□□ 0.73
MKS1-203ENST00000393120 KIF3BO15066 747 aa19.62■□□□□ 0.73
MKS1-203ENST00000393120 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
MKS1-203ENST00000393120 KTN1Q86UP2 1357 aaKnown RBP19.6■□□□□ 0.73
MKS1-203ENST00000393120 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
MKS1-203ENST00000393120 MROH1Q8NDA8 1641 aa19.6■□□□□ 0.73
MKS1-203ENST00000393120 SPHKAPQ2M3C7 1700 aa19.6■□□□□ 0.73
MKS1-203ENST00000393120 MLH3Q9UHC1 1453 aa19.59■□□□□ 0.73
MKS1-203ENST00000393120 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
MKS1-203ENST00000393120 POLR3GLQ9BT43 218 aa19.59■□□□□ 0.73
MKS1-203ENST00000393120 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
MKS1-203ENST00000393120 LMTK2Q8IWU2 1503 aa19.58■□□□□ 0.72
MKS1-203ENST00000393120 CEP152O94986 1710 aa19.57■□□□□ 0.72
MKS1-203ENST00000393120 TESK2Q96S53 571 aa19.57■□□□□ 0.72
MKS1-203ENST00000393120 CLTCL1P53675 1640 aa19.56■□□□□ 0.72
MKS1-203ENST00000393120 RNF17Q9BXT8 1623 aaKnown RBP19.56■□□□□ 0.72
MKS1-203ENST00000393120 NEO1Q92859 1461 aa19.55■□□□□ 0.72
MKS1-203ENST00000393120 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
MKS1-203ENST00000393120 MADDQ8WXG6 1647 aa19.54■□□□□ 0.72
MKS1-203ENST00000393120 NEFLP07196 543 aa19.53■□□□□ 0.72
MKS1-203ENST00000393120 RALBP1Q15311 655 aa19.53■□□□□ 0.72
MKS1-203ENST00000393120 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
MKS1-203ENST00000393120 ZBED9Q6R2W3 1325 aa19.53■□□□□ 0.72
MKS1-203ENST00000393120 EFCAB6Q5THR3 1501 aa19.53■□□□□ 0.72
MKS1-203ENST00000393120 FKBP8Q14318 412 aa19.52■□□□□ 0.72
MKS1-203ENST00000393120 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
MKS1-203ENST00000393120 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
MKS1-203ENST00000393120 TMF1P82094 1093 aa19.49■□□□□ 0.71
MKS1-203ENST00000393120 FRMPD1Q5SYB0 1578 aa19.47■□□□□ 0.71
MKS1-203ENST00000393120 PER1O15534 1290 aaPredicted RBP19.47■□□□□ 0.71
MKS1-203ENST00000393120 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
MKS1-203ENST00000393120 DISP3Q9P2K9 1392 aa19.47■□□□□ 0.71
MKS1-203ENST00000393120 MYBBP1AQ9BQG0 1328 aaKnown RBP19.46■□□□□ 0.71
MKS1-203ENST00000393120 MYOM2P54296 1465 aa19.46■□□□□ 0.71
MKS1-203ENST00000393120 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
MKS1-203ENST00000393120 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
MKS1-203ENST00000393120 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
MKS1-203ENST00000393120 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
MKS1-203ENST00000393120 IQGAP1P46940 1657 aa19.45■□□□□ 0.7
MKS1-203ENST00000393120 PARD3Q8TEW0 1356 aa19.43■□□□□ 0.7
MKS1-203ENST00000393120 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
MKS1-203ENST00000393120 GLI2P10070 1586 aa19.42■□□□□ 0.7
MKS1-203ENST00000393120 ABCA6Q8N139 1617 aa19.4■□□□□ 0.7
MKS1-203ENST00000393120 LRPPRCP42704 1394 aaKnown RBP19.4■□□□□ 0.7
MKS1-203ENST00000393120 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
MKS1-203ENST00000393120 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
MKS1-203ENST00000393120 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
MKS1-203ENST00000393120 NRXN1Q9ULB1 1477 aa19.4■□□□□ 0.7
MKS1-203ENST00000393120 NPATQ14207 1427 aa19.39■□□□□ 0.69
MKS1-203ENST00000393120 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
MKS1-203ENST00000393120 KIF1BO60333 1816 aa19.39■□□□□ 0.69
MKS1-203ENST00000393120 UGGT1Q9NYU2 1555 aa19.39■□□□□ 0.69
MKS1-203ENST00000393120 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
MKS1-203ENST00000393120 NLRP13Q86W25 1043 aa19.38■□□□□ 0.69
MKS1-203ENST00000393120 RAPGEF3O95398 923 aa19.37■□□□□ 0.69
MKS1-203ENST00000393120 PANK3Q9H999 370 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms