RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 RTEL1-TNFRSF6BF6WH68 1400 aa29.76■■■□□ 2.35
CNTFR-202ENST00000378980 DCAF11Q8TEB1 546 aa29.73■■■□□ 2.35
CNTFR-202ENST00000378980 ATP10AO60312 1499 aa29.72■■■□□ 2.35
CNTFR-202ENST00000378980 SUPT16HQ9Y5B9 1047 aaKnown RBP29.72■■■□□ 2.35
CNTFR-202ENST00000378980 SPAG9O60271 1321 aaKnown RBP29.71■■■□□ 2.35
CNTFR-202ENST00000378980 FANCAO15360 1455 aa29.71■■■□□ 2.35
CNTFR-202ENST00000378980 KDM2AQ9Y2K7 1162 aa29.7■■■□□ 2.35
CNTFR-202ENST00000378980 PRKRIP1Q9H875 184 aaPredicted RBP29.7■■■□□ 2.34
CNTFR-202ENST00000378980 CARD11Q9BXL7 1154 aa29.69■■■□□ 2.34
CNTFR-202ENST00000378980 TRPM1Q7Z4N2 1603 aa29.69■■■□□ 2.34
CNTFR-202ENST00000378980 ARID4BQ4LE39 1312 aaPredicted RBP29.69■■■□□ 2.34
CNTFR-202ENST00000378980 ASXL2Q76L83 1435 aa29.68■■■□□ 2.34
CNTFR-202ENST00000378980 INO80Q9ULG1 1556 aaPredicted RBP29.68■■■□□ 2.34
CNTFR-202ENST00000378980 PRAG1Q86YV5 1406 aa29.67■■■□□ 2.34
CNTFR-202ENST00000378980 AFAP1Q8N556 730 aa29.66■■■□□ 2.34
CNTFR-202ENST00000378980 PELP1Q8IZL8 1130 aaKnown RBP29.65■■■□□ 2.34
CNTFR-202ENST00000378980 A2MP01023 1474 aa29.65■■■□□ 2.34
CNTFR-202ENST00000378980 DEPDC5O75140 1603 aa29.65■■■□□ 2.34
CNTFR-202ENST00000378980 ATP7AQ04656 1500 aa29.64■■■□□ 2.34
CNTFR-202ENST00000378980 OSCARQ8IYS5 282 aa29.62■■■□□ 2.33
CNTFR-202ENST00000378980 E9PCH4 1651 aa29.61■■■□□ 2.33
CNTFR-202ENST00000378980 ADGRL1O94910 1474 aa29.61■■■□□ 2.33
CNTFR-202ENST00000378980 ROCK2O75116 1388 aaKnown RBP29.61■■■□□ 2.33
CNTFR-202ENST00000378980 DHX29Q7Z478 1369 aaKnown RBP29.59■■■□□ 2.33
CNTFR-202ENST00000378980 LAMC1P11047 1609 aa29.57■■■□□ 2.32
CNTFR-202ENST00000378980 RGL3Q3MIN7 710 aa29.56■■■□□ 2.32
CNTFR-202ENST00000378980 CCDC184Q52MB2 194 aa29.56■■■□□ 2.32
CNTFR-202ENST00000378980 EIF2AK4Q9P2K8 1649 aaKnown RBP29.56■■■□□ 2.32
CNTFR-202ENST00000378980 SCAPERQ9BY12 1400 aa29.56■■■□□ 2.32
CNTFR-202ENST00000378980 ST20-MTHFSA0A0A6YYL1 179 aa29.54■■■□□ 2.32
CNTFR-202ENST00000378980 GPRASP1Q5JY77 1395 aa29.54■■■□□ 2.32
CNTFR-202ENST00000378980 TET3O43151 1660 aa29.53■■■□□ 2.32
CNTFR-202ENST00000378980 HNRNPUQ00839 825 aaKnown RBP eCLIP29.53■■■□□ 2.32
CNTFR-202ENST00000378980 SPHKAPQ2M3C7 1700 aa29.52■■■□□ 2.32
CNTFR-202ENST00000378980 TRPM2O94759 1503 aa29.52■■■□□ 2.32
CNTFR-202ENST00000378980 VWDEQ8N2E2 1590 aa29.52■■■□□ 2.32
CNTFR-202ENST00000378980 POLR3GLQ9BT43 218 aa29.51■■■□□ 2.31
CNTFR-202ENST00000378980 MRS2Q9HD23 443 aa29.49■■■□□ 2.31
CNTFR-202ENST00000378980 PRDM15P57071 1507 aaPredicted RBP29.48■■■□□ 2.31
CNTFR-202ENST00000378980 CEP152O94986 1710 aa29.48■■■□□ 2.31
CNTFR-202ENST00000378980 NPM1P06748 294 aaKnown RBP eCLIP29.46■■■□□ 2.31
CNTFR-202ENST00000378980 PTPRTO14522 1441 aa29.46■■■□□ 2.31
CNTFR-202ENST00000378980 KIDINS220Q9ULH0 1771 aa29.46■■■□□ 2.31
CNTFR-202ENST00000378980 RNF17Q9BXT8 1623 aaKnown RBP29.45■■■□□ 2.3
CNTFR-202ENST00000378980 CFAP74Q9C0B2 1584 aa29.45■■■□□ 2.3
CNTFR-202ENST00000378980 MROH1Q8NDA8 1641 aa29.44■■■□□ 2.3
CNTFR-202ENST00000378980 NBPF1Q3BBV0 1214 aa29.44■■■□□ 2.3
CNTFR-202ENST00000378980 KANK1Q14678 1352 aa29.43■■■□□ 2.3
CNTFR-202ENST00000378980 CLTCL1P53675 1640 aa29.42■■■□□ 2.3
CNTFR-202ENST00000378980 ZNF518AQ6AHZ1 1483 aa29.42■■■□□ 2.3
CNTFR-202ENST00000378980 MADDQ8WXG6 1647 aa29.39■■■□□ 2.3
CNTFR-202ENST00000378980 FKBP8Q14318 412 aa29.39■■■□□ 2.3
CNTFR-202ENST00000378980 FAM9BQ8IZU0 186 aa29.38■■■□□ 2.29
CNTFR-202ENST00000378980 MYT1LQ9UL68 1186 aa29.38■■■□□ 2.29
CNTFR-202ENST00000378980 KIF3BO15066 747 aa29.37■■■□□ 2.29
CNTFR-202ENST00000378980 CD109Q6YHK3 1445 aa29.36■■■□□ 2.29
CNTFR-202ENST00000378980 NEFLP07196 543 aa29.35■■■□□ 2.29
CNTFR-202ENST00000378980 COL17A1Q9UMD9 1497 aaPredicted RBP29.35■■■□□ 2.29
CNTFR-202ENST00000378980 POGZQ7Z3K3 1410 aa29.32■■■□□ 2.28
CNTFR-202ENST00000378980 NEURL4Q96JN8 1562 aa29.32■■■□□ 2.28
CNTFR-202ENST00000378980 EFCAB6Q5THR3 1501 aa29.31■■■□□ 2.28
CNTFR-202ENST00000378980 ZBED9Q6R2W3 1325 aa29.29■■■□□ 2.28
CNTFR-202ENST00000378980 TESK2Q96S53 571 aa29.29■■■□□ 2.28
CNTFR-202ENST00000378980 IQGAP1P46940 1657 aa29.28■■■□□ 2.28
CNTFR-202ENST00000378980 KTN1Q86UP2 1357 aaKnown RBP29.28■■■□□ 2.28
CNTFR-202ENST00000378980 STAC3Q96MF2 364 aa29.28■■■□□ 2.28
CNTFR-202ENST00000378980 LMTK2Q8IWU2 1503 aa29.27■■■□□ 2.28
CNTFR-202ENST00000378980 HECW2Q9P2P5 1572 aa29.27■■■□□ 2.28
CNTFR-202ENST00000378980 MLH3Q9UHC1 1453 aa29.27■■■□□ 2.28
CNTFR-202ENST00000378980 PPRC1Q5VV67 1664 aaKnown RBP29.27■■■□□ 2.28
CNTFR-202ENST00000378980 CNGB1Q14028 1251 aaPredicted RBP29.25■■■□□ 2.27
CNTFR-202ENST00000378980 DISP3Q9P2K9 1392 aa29.25■■■□□ 2.27
CNTFR-202ENST00000378980 FRMPD1Q5SYB0 1578 aa29.23■■■□□ 2.27
CNTFR-202ENST00000378980 BCANQ96GW7 911 aa29.23■■■□□ 2.27
CNTFR-202ENST00000378980 KIF1BO60333 1816 aa29.22■■■□□ 2.27
CNTFR-202ENST00000378980 KIAA1210Q9ULL0 1709 aa29.21■■■□□ 2.27
CNTFR-202ENST00000378980 RALBP1Q15311 655 aa29.2■■■□□ 2.26
CNTFR-202ENST00000378980 NEO1Q92859 1461 aa29.2■■■□□ 2.26
CNTFR-202ENST00000378980 UGGT1Q9NYU2 1555 aa29.19■■■□□ 2.26
CNTFR-202ENST00000378980 ABCA6Q8N139 1617 aa29.18■■■□□ 2.26
CNTFR-202ENST00000378980 MYBBP1AQ9BQG0 1328 aaKnown RBP29.17■■■□□ 2.26
CNTFR-202ENST00000378980 TMF1P82094 1093 aa29.17■■■□□ 2.26
CNTFR-202ENST00000378980 IFT172Q9UG01 1749 aa29.16■■■□□ 2.26
CNTFR-202ENST00000378980 BRD4O60885 1362 aaPredicted RBP29.16■■■□□ 2.26
CNTFR-202ENST00000378980 MYOM2P54296 1465 aa29.14■■■□□ 2.26
CNTFR-202ENST00000378980 PNISRQ8TF01 805 aaKnown RBP29.14■■■□□ 2.26
CNTFR-202ENST00000378980 SCAF11Q99590 1463 aaKnown RBP29.14■■■□□ 2.26
CNTFR-202ENST00000378980 MAP3K4Q9Y6R4 1608 aa29.14■■■□□ 2.26
CNTFR-202ENST00000378980 MROH2AA6NES4 1674 aa29.13■■■□□ 2.25
CNTFR-202ENST00000378980 PARD3Q8TEW0 1356 aa29.13■■■□□ 2.25
CNTFR-202ENST00000378980 TMC1Q8TDI8 760 aa29.13■■■□□ 2.25
CNTFR-202ENST00000378980 PER1O15534 1290 aaPredicted RBP29.13■■■□□ 2.25
CNTFR-202ENST00000378980 WASHC2CQ9Y4E1 1318 aa29.08■■■□□ 2.25
CNTFR-202ENST00000378980 LRPPRCP42704 1394 aaKnown RBP29.08■■■□□ 2.25
CNTFR-202ENST00000378980 ADGRB3O60242 1522 aa29.07■■■□□ 2.24
CNTFR-202ENST00000378980 RICTORQ6R327 1708 aa29.07■■■□□ 2.24
CNTFR-202ENST00000378980 NPATQ14207 1427 aa29.06■■■□□ 2.24
CNTFR-202ENST00000378980 DIP2CQ9Y2E4 1556 aa29.05■■■□□ 2.24
CNTFR-202ENST00000378980 ABCC3O15438 1527 aa29.05■■■□□ 2.24
CNTFR-202ENST00000378980 PANK3Q9H999 370 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms