RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 KIF3BO15066 747 aa36.68■■■■□ 3.46
SDHAF1-201ENST00000378887 ZMYM3Q14202 1370 aa36.67■■■■□ 3.46
SDHAF1-201ENST00000378887 DEPDC5O75140 1603 aa36.67■■■■□ 3.46
SDHAF1-201ENST00000378887 GGT6Q6P531 493 aa36.67■■■■□ 3.46
SDHAF1-201ENST00000378887 PPP6R1Q9UPN7 881 aa36.67■■■■□ 3.46
SDHAF1-201ENST00000378887 ERBINQ96RT1 1412 aa36.67■■■■□ 3.46
SDHAF1-201ENST00000378887 KDM5DQ9BY66 1539 aa36.66■■■■□ 3.46
SDHAF1-201ENST00000378887 PRDM15P57071 1507 aaPredicted RBP36.64■■■■□ 3.46
SDHAF1-201ENST00000378887 SETD1BQ9UPS6 1966 aaKnown RBP36.64■■■■□ 3.46
SDHAF1-201ENST00000378887 FAM50AQ14320 339 aaKnown RBP36.62■■■■□ 3.45
SDHAF1-201ENST00000378887 NPATQ14207 1427 aa36.61■■■■□ 3.45
SDHAF1-201ENST00000378887 ABCC3O15438 1527 aa36.61■■■■□ 3.45
SDHAF1-201ENST00000378887 RRP7BPQ9NSQ0 103 aa36.6■■■■□ 3.45
SDHAF1-201ENST00000378887 ANKRD30AQ9BXX3 1397 aa36.59■■■■□ 3.45
SDHAF1-201ENST00000378887 PLPPR3Q6T4P5 718 aa36.58■■■■□ 3.45
SDHAF1-201ENST00000378887 CHIC2Q9UKJ5 165 aa36.58■■■■□ 3.45
SDHAF1-201ENST00000378887 ZC3H13Q5T200 1668 aaKnown RBP36.57■■■■□ 3.44
SDHAF1-201ENST00000378887 VWDEQ8N2E2 1590 aa36.57■■■■□ 3.44
SDHAF1-201ENST00000378887 CEP152O94986 1710 aa36.53■■■■□ 3.44
SDHAF1-201ENST00000378887 PZPP20742 1482 aa36.52■■■■□ 3.44
SDHAF1-201ENST00000378887 ROCK1Q13464 1354 aa36.52■■■■□ 3.44
SDHAF1-201ENST00000378887 MYO3AQ8NEV4 1616 aa36.48■■■■□ 3.43
SDHAF1-201ENST00000378887 ESF1Q9H501 851 aaKnown RBP36.48■■■■□ 3.43
SDHAF1-201ENST00000378887 CAMSAP1Q5T5Y3 1602 aa36.47■■■■□ 3.43
SDHAF1-201ENST00000378887 ZNF142P52746 1687 aaPredicted RBP36.47■■■■□ 3.43
SDHAF1-201ENST00000378887 UHRF1BP1Q6BDS2 1440 aa36.45■■■■□ 3.43
SDHAF1-201ENST00000378887 HSPA2P54652 639 aa36.45■■■■□ 3.43
SDHAF1-201ENST00000378887 LMTK2Q8IWU2 1503 aa36.43■■■■□ 3.42
SDHAF1-201ENST00000378887 ANKRD50Q9ULJ7 1429 aa36.42■■■■□ 3.42
SDHAF1-201ENST00000378887 WASHC2CQ9Y4E1 1318 aa36.41■■■■□ 3.42
SDHAF1-201ENST00000378887 STRCQ7RTU9 1775 aa36.41■■■■□ 3.42
SDHAF1-201ENST00000378887 SPATA31D1Q6ZQQ2 1576 aa36.4■■■■□ 3.42
SDHAF1-201ENST00000378887 FBXO31Q5XUX0 539 aaPredicted RBP36.39■■■■□ 3.42
SDHAF1-201ENST00000378887 UNC13BO14795 1591 aa36.39■■■■□ 3.42
SDHAF1-201ENST00000378887 ARHGAP31Q2M1Z3 1444 aa36.36■■■■□ 3.41
SDHAF1-201ENST00000378887 CEP170BQ9Y4F5 1589 aaPredicted RBP36.36■■■■□ 3.41
SDHAF1-201ENST00000378887 ERVK-7P63135 1459 aa36.32■■■■□ 3.41
SDHAF1-201ENST00000378887 TNRQ92752 1358 aa36.28■■■■□ 3.4
SDHAF1-201ENST00000378887 EFCAB6Q5THR3 1501 aa36.28■■■■□ 3.4
SDHAF1-201ENST00000378887 A2ML1A8K2U0 1454 aa36.27■■■■□ 3.4
SDHAF1-201ENST00000378887 GCC2Q8IWJ2 1684 aa36.25■■■■□ 3.39
SDHAF1-201ENST00000378887 ITGAEP38570 1179 aa36.24■■■■□ 3.39
SDHAF1-201ENST00000378887 NAIPQ13075 1403 aa36.23■■■■□ 3.39
SDHAF1-201ENST00000378887 IQGAP3Q86VI3 1631 aa36.21■■■■□ 3.39
SDHAF1-201ENST00000378887 CFAP65Q6ZU64 1925 aaKnown RBP36.2■■■■□ 3.39
SDHAF1-201ENST00000378887 TET3O43151 1660 aa36.19■■■■□ 3.38
SDHAF1-201ENST00000378887 NLRP1Q9C000 1473 aa36.19■■■■□ 3.38
SDHAF1-201ENST00000378887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.18■■■■□ 3.38
SDHAF1-201ENST00000378887 PLA2R1Q13018 1463 aa36.18■■■■□ 3.38
SDHAF1-201ENST00000378887 SYNMO15061 1565 aa36.17■■■■□ 3.38
SDHAF1-201ENST00000378887 NOS1P29475 1434 aa36.16■■■■□ 3.38
SDHAF1-201ENST00000378887 HFM1A2PYH4 1435 aa36.15■■■■□ 3.38
SDHAF1-201ENST00000378887 KANK1Q14678 1352 aa36.15■■■■□ 3.38
SDHAF1-201ENST00000378887 E9PCH4 1651 aa36.1■■■■□ 3.37
SDHAF1-201ENST00000378887 UBR1Q8IWV7 1749 aa36.09■■■■□ 3.37
SDHAF1-201ENST00000378887 RPRD2Q5VT52 1461 aaKnown RBP36.08■■■■□ 3.37
SDHAF1-201ENST00000378887 NEURL4Q96JN8 1562 aa36.07■■■■□ 3.37
SDHAF1-201ENST00000378887 UGGT1Q9NYU2 1555 aa36.06■■■■□ 3.36
SDHAF1-201ENST00000378887 PTPRTO14522 1441 aa36.05■■■■□ 3.36
SDHAF1-201ENST00000378887 PIK3C2BO00750 1634 aa36.03■■■■□ 3.36
SDHAF1-201ENST00000378887 POLR1AO95602 1720 aaPredicted RBP35.99■■■■□ 3.35
SDHAF1-201ENST00000378887 KDM5AP29375 1690 aaKnown RBP35.98■■■■□ 3.35
SDHAF1-201ENST00000378887 NUP155O75694 1391 aa35.97■■■■□ 3.35
SDHAF1-201ENST00000378887 NCKAP5LQ9HCH0 1330 aa35.96■■■■□ 3.35
SDHAF1-201ENST00000378887 ARHGAP23Q9P227 1491 aa35.96■■■■□ 3.35
SDHAF1-201ENST00000378887 SLIT1O75093 1534 aa35.93■■■■□ 3.34
SDHAF1-201ENST00000378887 MED14O60244 1454 aa35.9■■■■□ 3.34
SDHAF1-201ENST00000378887 IDI1Q13907 227 aa35.89■■■■□ 3.34
SDHAF1-201ENST00000378887 LTBP4Q8N2S1 1624 aa35.88■■■■□ 3.33
SDHAF1-201ENST00000378887 PKD2Q13563 968 aa35.88■■■■□ 3.33
SDHAF1-201ENST00000378887 ADGRB3O60242 1522 aa35.88■■■■□ 3.33
SDHAF1-201ENST00000378887 THEMISQ8N1K5 641 aaPredicted RBP35.84■■■■□ 3.33
SDHAF1-201ENST00000378887 DMRT2Q9Y5R5 561 aa35.83■■■■□ 3.33
SDHAF1-201ENST00000378887 MYO5BQ9ULV0 1848 aa35.83■■■■□ 3.33
SDHAF1-201ENST00000378887 TMEM131LA2VDJ0 1609 aa35.83■■■■□ 3.33
SDHAF1-201ENST00000378887 SPHKAPQ2M3C7 1700 aa35.81■■■■□ 3.32
SDHAF1-201ENST00000378887 SLC52A1Q9NWF4 448 aa35.77■■■■□ 3.32
SDHAF1-201ENST00000378887 TMEM2Q9UHN6 1383 aa35.76■■■■□ 3.32
SDHAF1-201ENST00000378887 IQGAP1P46940 1657 aa35.76■■■■□ 3.32
SDHAF1-201ENST00000378887 LTKP29376 864 aa35.75■■■■□ 3.31
SDHAF1-201ENST00000378887 SCAF11Q99590 1463 aaKnown RBP35.74■■■■□ 3.31
SDHAF1-201ENST00000378887 NPHP4O75161 1426 aaPredicted RBP35.73■■■■□ 3.31
SDHAF1-201ENST00000378887 ZFYVE9O95405 1425 aa35.73■■■■□ 3.31
SDHAF1-201ENST00000378887 TRPM2O94759 1503 aa35.72■■■■□ 3.31
SDHAF1-201ENST00000378887 ANKLE2Q86XL3 938 aa35.71■■■■□ 3.31
SDHAF1-201ENST00000378887 SETD5Q9C0A6 1442 aa35.69■■■■□ 3.3
SDHAF1-201ENST00000378887 CLTCL1P53675 1640 aa35.68■■■■□ 3.3
SDHAF1-201ENST00000378887 ZNF335Q9H4Z2 1342 aaPredicted RBP35.65■■■■□ 3.3
SDHAF1-201ENST00000378887 STRCP1A6NGW2 1772 aa35.64■■■■□ 3.3
SDHAF1-201ENST00000378887 RAB3GAP2Q9H2M9 1393 aa35.61■■■■□ 3.29
SDHAF1-201ENST00000378887 CERKQ8TCT0 537 aa35.59■■■■□ 3.29
SDHAF1-201ENST00000378887 TXNDC2Q86VQ3 553 aa35.56■■■■□ 3.28
SDHAF1-201ENST00000378887 TRIM52Q96A61 297 aa35.55■■■■□ 3.28
SDHAF1-201ENST00000378887 RIMS2Q9UQ26 1411 aa35.54■■■■□ 3.28
SDHAF1-201ENST00000378887 SLC4A1APQ9BWU0 796 aaKnown RBP35.52■■■■□ 3.28
SDHAF1-201ENST00000378887 IQSEC2Q5JU85 1478 aa35.5■■■■□ 3.27
SDHAF1-201ENST00000378887 ILDR1Q86SU0 546 aaPredicted RBP35.5■■■■□ 3.27
SDHAF1-201ENST00000378887 MPHOSPH9Q99550 1183 aa35.48■■■■□ 3.27
SDHAF1-201ENST00000378887 STAG3Q9UJ98 1225 aa35.48■■■■□ 3.27
SDHAF1-201ENST00000378887 FOXD1Q16676 465 aa35.47■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms