RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 MROH2AA6NES4 1674 aa34.55■■■■□ 3.12
YIF1A-202ENST00000376899 PPP6R1Q9UPN7 881 aa34.54■■■■□ 3.12
YIF1A-202ENST00000376899 GGT6Q6P531 493 aa34.53■■■■□ 3.12
YIF1A-202ENST00000376899 MROH1Q8NDA8 1641 aa34.52■■■■□ 3.12
YIF1A-202ENST00000376899 CLTCQ00610 1675 aaKnown RBP34.5■■■■□ 3.11
YIF1A-202ENST00000376899 DEPDC5O75140 1603 aa34.49■■■■□ 3.11
YIF1A-202ENST00000376899 C3P01024 1663 aa34.48■■■■□ 3.11
YIF1A-202ENST00000376899 ITGAEP38570 1179 aa34.47■■■■□ 3.11
YIF1A-202ENST00000376899 KDM5DQ9BY66 1539 aa34.46■■■■□ 3.11
YIF1A-202ENST00000376899 ESF1Q9H501 851 aaKnown RBP34.46■■■■□ 3.11
YIF1A-202ENST00000376899 PRDM15P57071 1507 aaPredicted RBP34.45■■■■□ 3.11
YIF1A-202ENST00000376899 ANKRD50Q9ULJ7 1429 aa34.45■■■■□ 3.11
YIF1A-202ENST00000376899 ZC3H13Q5T200 1668 aaKnown RBP34.44■■■■□ 3.1
YIF1A-202ENST00000376899 ABCC3O15438 1527 aa34.38■■■■□ 3.09
YIF1A-202ENST00000376899 ZMYM3Q14202 1370 aa34.37■■■■□ 3.09
YIF1A-202ENST00000376899 GCC2Q8IWJ2 1684 aa34.36■■■■□ 3.09
YIF1A-202ENST00000376899 VWDEQ8N2E2 1590 aa34.35■■■■□ 3.09
YIF1A-202ENST00000376899 CEP152O94986 1710 aa34.34■■■■□ 3.09
YIF1A-202ENST00000376899 CEBPAP49715 358 aaPredicted RBP34.34■■■■□ 3.09
YIF1A-202ENST00000376899 WASHC2CQ9Y4E1 1318 aa34.33■■■■□ 3.09
YIF1A-202ENST00000376899 UNC13BO14795 1591 aa34.32■■■■□ 3.09
YIF1A-202ENST00000376899 NAIPQ13075 1403 aa34.3■■■■□ 3.08
YIF1A-202ENST00000376899 SETD1BQ9UPS6 1966 aaKnown RBP34.29■■■■□ 3.08
YIF1A-202ENST00000376899 PLPPR3Q6T4P5 718 aa34.29■■■■□ 3.08
YIF1A-202ENST00000376899 HFM1A2PYH4 1435 aa34.29■■■■□ 3.08
YIF1A-202ENST00000376899 NPATQ14207 1427 aa34.29■■■■□ 3.08
YIF1A-202ENST00000376899 CAMSAP1Q5T5Y3 1602 aa34.28■■■■□ 3.08
YIF1A-202ENST00000376899 LMTK2Q8IWU2 1503 aa34.27■■■■□ 3.08
YIF1A-202ENST00000376899 PZPP20742 1482 aa34.27■■■■□ 3.08
YIF1A-202ENST00000376899 PREX1Q8TCU6 1659 aa34.25■■■■□ 3.07
YIF1A-202ENST00000376899 KANK1Q14678 1352 aa34.25■■■■□ 3.07
YIF1A-202ENST00000376899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.21■■■■□ 3.07
YIF1A-202ENST00000376899 LMTK3Q96Q04 1460 aa34.2■■■■□ 3.07
YIF1A-202ENST00000376899 ARHGAP31Q2M1Z3 1444 aa34.19■■■■□ 3.06
YIF1A-202ENST00000376899 IQGAP3Q86VI3 1631 aa34.17■■■■□ 3.06
YIF1A-202ENST00000376899 EFCAB6Q5THR3 1501 aa34.14■■■■□ 3.06
YIF1A-202ENST00000376899 TET3O43151 1660 aa34.14■■■■□ 3.06
YIF1A-202ENST00000376899 SPATA31D1Q6ZQQ2 1576 aa34.13■■■■□ 3.05
YIF1A-202ENST00000376899 UHRF1BP1Q6BDS2 1440 aa34.13■■■■□ 3.05
YIF1A-202ENST00000376899 MYO3AQ8NEV4 1616 aa34.12■■■■□ 3.05
YIF1A-202ENST00000376899 ERVK-7P63135 1459 aa34.1■■■■□ 3.05
YIF1A-202ENST00000376899 FBXO31Q5XUX0 539 aaPredicted RBP34.09■■■■□ 3.05
YIF1A-202ENST00000376899 ZNF142P52746 1687 aaPredicted RBP34.09■■■■□ 3.05
YIF1A-202ENST00000376899 TNRQ92752 1358 aa34.07■■■■□ 3.04
YIF1A-202ENST00000376899 NUP155O75694 1391 aa34.06■■■■□ 3.04
YIF1A-202ENST00000376899 CFAP65Q6ZU64 1925 aaKnown RBP34.06■■■■□ 3.04
YIF1A-202ENST00000376899 RPRD2Q5VT52 1461 aaKnown RBP34.04■■■■□ 3.04
YIF1A-202ENST00000376899 CEP170BQ9Y4F5 1589 aaPredicted RBP34.02■■■■□ 3.04
YIF1A-202ENST00000376899 E9PCH4 1651 aa34■■■■□ 3.03
YIF1A-202ENST00000376899 NLRP1Q9C000 1473 aa33.99■■■■□ 3.03
YIF1A-202ENST00000376899 A2ML1A8K2U0 1454 aa33.98■■■■□ 3.03
YIF1A-202ENST00000376899 SETD5Q9C0A6 1442 aa33.97■■■■□ 3.03
YIF1A-202ENST00000376899 NOS1P29475 1434 aa33.96■■■■□ 3.03
YIF1A-202ENST00000376899 SYNMO15061 1565 aa33.93■■■■□ 3.02
YIF1A-202ENST00000376899 HSPA2P54652 639 aa33.92■■■■□ 3.02
YIF1A-202ENST00000376899 ACIN1Q9UKV3 1341 aaKnown RBP33.87■■■■□ 3.01
YIF1A-202ENST00000376899 RAB3GAP2Q9H2M9 1393 aa33.86■■■■□ 3.01
YIF1A-202ENST00000376899 TRIM52Q96A61 297 aa33.85■■■■□ 3.01
YIF1A-202ENST00000376899 UGGT1Q9NYU2 1555 aa33.84■■■■□ 3.01
YIF1A-202ENST00000376899 STRCQ7RTU9 1775 aa33.83■■■■□ 3.01
YIF1A-202ENST00000376899 PLA2R1Q13018 1463 aa33.82■■■■□ 3.01
YIF1A-202ENST00000376899 UBR1Q8IWV7 1749 aa33.82■■■■□ 3
YIF1A-202ENST00000376899 PIK3C2BO00750 1634 aa33.82■■■■□ 3
YIF1A-202ENST00000376899 SPHKAPQ2M3C7 1700 aa33.82■■■■□ 3
YIF1A-202ENST00000376899 KDM5AP29375 1690 aaKnown RBP33.81■■■■□ 3
YIF1A-202ENST00000376899 PTPRTO14522 1441 aa33.78■■■■□ 3
YIF1A-202ENST00000376899 SLC52A1Q9NWF4 448 aa33.76■■■□□ 2.99
YIF1A-202ENST00000376899 HRCP23327 699 aa33.75■■■□□ 2.99
YIF1A-202ENST00000376899 SLC4A1APQ9BWU0 796 aaKnown RBP33.75■■■□□ 2.99
YIF1A-202ENST00000376899 IDI1Q13907 227 aa33.74■■■□□ 2.99
YIF1A-202ENST00000376899 ADGRB3O60242 1522 aa33.73■■■□□ 2.99
YIF1A-202ENST00000376899 TRPM2O94759 1503 aa33.71■■■□□ 2.99
YIF1A-202ENST00000376899 PKD2Q13563 968 aa33.71■■■□□ 2.99
YIF1A-202ENST00000376899 THEMISQ8N1K5 641 aaPredicted RBP33.71■■■□□ 2.99
YIF1A-202ENST00000376899 TRIM26Q12899 539 aaPredicted RBP33.69■■■□□ 2.98
YIF1A-202ENST00000376899 POLR1AO95602 1720 aaPredicted RBP33.69■■■□□ 2.98
YIF1A-202ENST00000376899 MPHOSPH9Q99550 1183 aa33.68■■■□□ 2.98
YIF1A-202ENST00000376899 TMEM131LA2VDJ0 1609 aa33.66■■■□□ 2.98
YIF1A-202ENST00000376899 SLIT1O75093 1534 aa33.66■■■□□ 2.98
YIF1A-202ENST00000376899 ARHGAP23Q9P227 1491 aa33.65■■■□□ 2.98
YIF1A-202ENST00000376899 MYO5BQ9ULV0 1848 aa33.64■■■□□ 2.98
YIF1A-202ENST00000376899 CLTCL1P53675 1640 aa33.63■■■□□ 2.97
YIF1A-202ENST00000376899 NEURL4Q96JN8 1562 aa33.62■■■□□ 2.97
YIF1A-202ENST00000376899 NCKAP5LQ9HCH0 1330 aa33.59■■■□□ 2.97
YIF1A-202ENST00000376899 STAG3Q9UJ98 1225 aa33.58■■■□□ 2.97
YIF1A-202ENST00000376899 DMRT2Q9Y5R5 561 aa33.58■■■□□ 2.97
YIF1A-202ENST00000376899 TMEM2Q9UHN6 1383 aa33.58■■■□□ 2.97
YIF1A-202ENST00000376899 MED14O60244 1454 aa33.56■■■□□ 2.96
YIF1A-202ENST00000376899 ANKLE2Q86XL3 938 aa33.55■■■□□ 2.96
YIF1A-202ENST00000376899 FOXD1Q16676 465 aa33.54■■■□□ 2.96
YIF1A-202ENST00000376899 SCAF11Q99590 1463 aaKnown RBP33.53■■■□□ 2.96
YIF1A-202ENST00000376899 KIF1BO60333 1816 aa33.53■■■□□ 2.96
YIF1A-202ENST00000376899 ZFYVE9O95405 1425 aa33.49■■■□□ 2.95
YIF1A-202ENST00000376899 IQGAP1P46940 1657 aa33.48■■■□□ 2.95
YIF1A-202ENST00000376899 NPHP4O75161 1426 aaPredicted RBP33.47■■■□□ 2.95
YIF1A-202ENST00000376899 LTKP29376 864 aa33.46■■■□□ 2.95
YIF1A-202ENST00000376899 CHGAP10645 457 aaKnown RBP33.45■■■□□ 2.95
YIF1A-202ENST00000376899 TXNDC2Q86VQ3 553 aa33.44■■■□□ 2.94
YIF1A-202ENST00000376899 EID1Q9Y6B2 187 aa33.44■■■□□ 2.94
YIF1A-202ENST00000376899 CCDC144AA2RUR9 1427 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms