RNA–Protein interactions for RNA: ENST00000376581.9

FARP1-202, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2 BASIC

Gene FARP1, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-202ENST00000376581 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
FARP1-202ENST00000376581 CLTCQ00610 1675 aaKnown RBP13.8□□□□□ -0.2
FARP1-202ENST00000376581 ABCC1P33527 1531 aa13.8□□□□□ -0.2
FARP1-202ENST00000376581 ZNF142P52746 1687 aaPredicted RBP13.79□□□□□ -0.2
FARP1-202ENST00000376581 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
FARP1-202ENST00000376581 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
FARP1-202ENST00000376581 HSPA1LP34931 641 aa13.79□□□□□ -0.2
FARP1-202ENST00000376581 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
FARP1-202ENST00000376581 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
FARP1-202ENST00000376581 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
FARP1-202ENST00000376581 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
FARP1-202ENST00000376581 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
FARP1-202ENST00000376581 SPAG9O60271 1321 aaKnown RBP13.77□□□□□ -0.21
FARP1-202ENST00000376581 MED1Q15648 1581 aaPredicted RBP13.77□□□□□ -0.21
FARP1-202ENST00000376581 MYO3AQ8NEV4 1616 aa13.77□□□□□ -0.21
FARP1-202ENST00000376581 CEP170BQ9Y4F5 1589 aaPredicted RBP13.76□□□□□ -0.21
FARP1-202ENST00000376581 GGT6Q6P531 493 aa13.76□□□□□ -0.21
FARP1-202ENST00000376581 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
FARP1-202ENST00000376581 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
FARP1-202ENST00000376581 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
FARP1-202ENST00000376581 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
FARP1-202ENST00000376581 POLR1AO95602 1720 aaPredicted RBP13.73□□□□□ -0.21
FARP1-202ENST00000376581 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.217e-7■■□□□ 13
FARP1-202ENST00000376581 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
FARP1-202ENST00000376581 CPS1P31327 1500 aa13.72□□□□□ -0.21
FARP1-202ENST00000376581 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
FARP1-202ENST00000376581 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
FARP1-202ENST00000376581 PTPRKQ15262 1439 aa13.71□□□□□ -0.22
FARP1-202ENST00000376581 ATP7AQ04656 1500 aa13.69□□□□□ -0.22
FARP1-202ENST00000376581 A2MP01023 1474 aa13.69□□□□□ -0.22
FARP1-202ENST00000376581 DNMT1P26358 1616 aaKnown RBP13.69□□□□□ -0.22
FARP1-202ENST00000376581 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
FARP1-202ENST00000376581 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
FARP1-202ENST00000376581 A2ML1A8K2U0 1454 aa13.68□□□□□ -0.22
FARP1-202ENST00000376581 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
FARP1-202ENST00000376581 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
FARP1-202ENST00000376581 CFDP1Q9UEE9 299 aaPredicted RBP13.67□□□□□ -0.22
FARP1-202ENST00000376581 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
FARP1-202ENST00000376581 THEMISQ8N1K5 641 aaPredicted RBP13.66□□□□□ -0.22
FARP1-202ENST00000376581 CASKIN1Q8WXD9 1431 aa13.65□□□□□ -0.22
FARP1-202ENST00000376581 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
FARP1-202ENST00000376581 KIAA1107Q9UPP5 1409 aa13.64□□□□□ -0.23
FARP1-202ENST00000376581 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
FARP1-202ENST00000376581 INO80Q9ULG1 1556 aaPredicted RBP13.63□□□□□ -0.23
FARP1-202ENST00000376581 GPATCH8Q9UKJ3 1502 aaKnown RBP13.63□□□□□ -0.23
FARP1-202ENST00000376581 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
FARP1-202ENST00000376581 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
FARP1-202ENST00000376581 TNRQ92752 1358 aa13.61□□□□□ -0.23
FARP1-202ENST00000376581 FBXO31Q5XUX0 539 aaPredicted RBP13.6□□□□□ -0.23
FARP1-202ENST00000376581 NEURL4Q96JN8 1562 aa13.6□□□□□ -0.23
FARP1-202ENST00000376581 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
FARP1-202ENST00000376581 WASHC2CQ9Y4E1 1318 aa13.59□□□□□ -0.23
FARP1-202ENST00000376581 KIF3BO15066 747 aa13.58□□□□□ -0.24
FARP1-202ENST00000376581 FAM135AQ9P2D6 1515 aa13.58□□□□□ -0.24
FARP1-202ENST00000376581 DEPDC5O75140 1603 aa13.57□□□□□ -0.24
FARP1-202ENST00000376581 NPHP4O75161 1426 aaPredicted RBP13.57□□□□□ -0.24
FARP1-202ENST00000376581 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
FARP1-202ENST00000376581 VWDEQ8N2E2 1590 aa13.57□□□□□ -0.24
FARP1-202ENST00000376581 UGGT1Q9NYU2 1555 aa13.57□□□□□ -0.24
FARP1-202ENST00000376581 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
FARP1-202ENST00000376581 IQGAP1P46940 1657 aa13.56□□□□□ -0.24
FARP1-202ENST00000376581 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
FARP1-202ENST00000376581 MED14O60244 1454 aa13.55□□□□□ -0.24
FARP1-202ENST00000376581 PZPP20742 1482 aa13.55□□□□□ -0.24
FARP1-202ENST00000376581 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
FARP1-202ENST00000376581 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
FARP1-202ENST00000376581 NLRP1Q9C000 1473 aa13.55□□□□□ -0.24
FARP1-202ENST00000376581 MTUS2Q5JR59 1369 aa13.54□□□□□ -0.24
FARP1-202ENST00000376581 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
FARP1-202ENST00000376581 KDM5DQ9BY66 1539 aa13.53□□□□□ -0.24
FARP1-202ENST00000376581 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
FARP1-202ENST00000376581 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
FARP1-202ENST00000376581 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.25
FARP1-202ENST00000376581 SYNMO15061 1565 aa13.51□□□□□ -0.25
FARP1-202ENST00000376581 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
FARP1-202ENST00000376581 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
FARP1-202ENST00000376581 RGS17Q9UGC6 210 aaPredicted RBP13.51□□□□□ -0.25
FARP1-202ENST00000376581 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
FARP1-202ENST00000376581 TSPY4P0CV99 314 aa13.48□□□□□ -0.25
FARP1-202ENST00000376581 TSPY10P0CW01 314 aa13.48□□□□□ -0.25
FARP1-202ENST00000376581 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
FARP1-202ENST00000376581 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
FARP1-202ENST00000376581 FKBP8Q14318 412 aa13.46□□□□□ -0.25
FARP1-202ENST00000376581 PROM2Q8N271 834 aa13.45□□□□□ -0.26
FARP1-202ENST00000376581 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
FARP1-202ENST00000376581 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
FARP1-202ENST00000376581 CCDC141Q6ZP82 1450 aa13.44□□□□□ -0.26
FARP1-202ENST00000376581 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
FARP1-202ENST00000376581 TXNDC2Q86VQ3 553 aa13.44□□□□□ -0.26
FARP1-202ENST00000376581 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
FARP1-202ENST00000376581 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
FARP1-202ENST00000376581 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
FARP1-202ENST00000376581 FAM135BQ49AJ0 1406 aa13.42□□□□□ -0.26
FARP1-202ENST00000376581 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
FARP1-202ENST00000376581 SCAF11Q99590 1463 aaKnown RBP13.41□□□□□ -0.26
FARP1-202ENST00000376581 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
FARP1-202ENST00000376581 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
FARP1-202ENST00000376581 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
FARP1-202ENST00000376581 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
FARP1-202ENST00000376581 CEP152O94986 1710 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms