RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 MS4A1P11836 297 aa25.52■■□□□ 1.68
TMEM235-201ENST00000374946 SALL2Q9Y467 1007 aaPredicted RBP25.52■■□□□ 1.68
TMEM235-201ENST00000374946 RALGAPBQ86X10 1494 aa25.51■■□□□ 1.68
TMEM235-201ENST00000374946 ABCA8O94911 1581 aa25.51■■□□□ 1.67
TMEM235-201ENST00000374946 UHRF1BP1Q6BDS2 1440 aa25.51■■□□□ 1.67
TMEM235-201ENST00000374946 RALBP1Q15311 655 aa25.51■■□□□ 1.67
TMEM235-201ENST00000374946 KTN1Q86UP2 1357 aaKnown RBP25.5■■□□□ 1.67
TMEM235-201ENST00000374946 E9PCH4 1651 aa25.5■■□□□ 1.67
TMEM235-201ENST00000374946 CARD11Q9BXL7 1154 aa25.5■■□□□ 1.67
TMEM235-201ENST00000374946 ADCY10Q96PN6 1610 aa25.49■■□□□ 1.67
TMEM235-201ENST00000374946 ATP10BO94823 1461 aa25.49■■□□□ 1.67
TMEM235-201ENST00000374946 ITSN2Q9NZM3 1697 aa25.47■■□□□ 1.67
TMEM235-201ENST00000374946 RTN4Q9NQC3 1192 aaKnown RBP25.46■■□□□ 1.67
TMEM235-201ENST00000374946 PPM1GO15355 546 aaPredicted RBP25.45■■□□□ 1.67
TMEM235-201ENST00000374946 ST20-MTHFSA0A0A6YYL1 179 aa25.45■■□□□ 1.66
TMEM235-201ENST00000374946 PLEKHD1A6NEE1 506 aa25.45■■□□□ 1.66
TMEM235-201ENST00000374946 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
TMEM235-201ENST00000374946 PDE3BQ13370 1112 aa25.44■■□□□ 1.66
TMEM235-201ENST00000374946 WASHC2CQ9Y4E1 1318 aa25.43■■□□□ 1.66
TMEM235-201ENST00000374946 ADGRL2O95490 1459 aa25.41■■□□□ 1.66
TMEM235-201ENST00000374946 ABCC10Q5T3U5 1492 aa25.4■■□□□ 1.66
TMEM235-201ENST00000374946 CDC42BPAQ5VT25 1732 aa25.39■■□□□ 1.66
TMEM235-201ENST00000374946 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.66
TMEM235-201ENST00000374946 NLRP13Q86W25 1043 aa25.39■■□□□ 1.66
TMEM235-201ENST00000374946 CHD1O14646 1710 aa25.38■■□□□ 1.65
TMEM235-201ENST00000374946 PTPRGP23470 1445 aa25.38■■□□□ 1.65
TMEM235-201ENST00000374946 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
TMEM235-201ENST00000374946 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
TMEM235-201ENST00000374946 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
TMEM235-201ENST00000374946 SKAP1Q86WV1 359 aa25.35■■□□□ 1.65
TMEM235-201ENST00000374946 PARD3Q8TEW0 1356 aa25.35■■□□□ 1.65
TMEM235-201ENST00000374946 PLIN1O60240 522 aa25.35■■□□□ 1.65
TMEM235-201ENST00000374946 ANKRD50Q9ULJ7 1429 aa25.35■■□□□ 1.65
TMEM235-201ENST00000374946 DDRGK1Q96HY6 314 aa25.34■■□□□ 1.65
TMEM235-201ENST00000374946 NUP155O75694 1391 aa25.31■■□□□ 1.64
TMEM235-201ENST00000374946 CRBNQ96SW2 442 aa25.3■■□□□ 1.64
TMEM235-201ENST00000374946 DCAF11Q8TEB1 546 aa25.29■■□□□ 1.64
TMEM235-201ENST00000374946 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.64
TMEM235-201ENST00000374946 ERCC6L2Q5T890 1561 aa25.26■■□□□ 1.63
TMEM235-201ENST00000374946 GSE1Q14687 1217 aa25.26■■□□□ 1.63
TMEM235-201ENST00000374946 C9orf84Q5VXU9 1444 aa25.25■■□□□ 1.63
TMEM235-201ENST00000374946 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
TMEM235-201ENST00000374946 NFKBIBQ15653 356 aa25.24■■□□□ 1.63
TMEM235-201ENST00000374946 BRPF3Q9ULD4 1205 aa25.23■■□□□ 1.63
TMEM235-201ENST00000374946 BLMP54132 1417 aaPredicted RBP25.22■■□□□ 1.63
TMEM235-201ENST00000374946 KDM5DQ9BY66 1539 aa25.21■■□□□ 1.63
TMEM235-201ENST00000374946 SHROOM2Q13796 1616 aa25.21■■□□□ 1.63
TMEM235-201ENST00000374946 TRPM1Q7Z4N2 1603 aa25.2■■□□□ 1.62
TMEM235-201ENST00000374946 SLC4A3P48751 1232 aa25.2■■□□□ 1.62
TMEM235-201ENST00000374946 INSRP06213 1382 aa25.2■■□□□ 1.62
TMEM235-201ENST00000374946 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.19■■□□□ 1.62
TMEM235-201ENST00000374946 SHANK2Q9UPX8 1470 aa25.18■■□□□ 1.62
TMEM235-201ENST00000374946 C20orf194Q5TEA3 1177 aa25.18■■□□□ 1.62
TMEM235-201ENST00000374946 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
TMEM235-201ENST00000374946 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
TMEM235-201ENST00000374946 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
TMEM235-201ENST00000374946 TSPY4P0CV99 314 aa25.17■■□□□ 1.62
TMEM235-201ENST00000374946 TSPY10P0CW01 314 aa25.17■■□□□ 1.62
TMEM235-201ENST00000374946 CC2D1BQ5T0F9 858 aaKnown RBP25.17■■□□□ 1.62
TMEM235-201ENST00000374946 SAMD9LQ8IVG5 1584 aa25.16■■□□□ 1.62
TMEM235-201ENST00000374946 PLEKHH2Q8IVE3 1493 aa25.14■■□□□ 1.61
TMEM235-201ENST00000374946 FRAT1Q92837 279 aaPredicted RBP25.14■■□□□ 1.61
TMEM235-201ENST00000374946 DAXXQ9UER7 740 aaPredicted RBP25.14■■□□□ 1.61
TMEM235-201ENST00000374946 PRAG1Q86YV5 1406 aa25.13■■□□□ 1.61
TMEM235-201ENST00000374946 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
TMEM235-201ENST00000374946 TTC37Q6PGP7 1564 aa25.12■■□□□ 1.61
TMEM235-201ENST00000374946 CENPQQ7L2Z9 268 aaPredicted RBP25.11■■□□□ 1.61
TMEM235-201ENST00000374946 ARHGEF5Q12774 1597 aa25.11■■□□□ 1.61
TMEM235-201ENST00000374946 NBPF1Q3BBV0 1214 aa25.11■■□□□ 1.61
TMEM235-201ENST00000374946 COL17A1Q9UMD9 1497 aaPredicted RBP25.1■■□□□ 1.61
TMEM235-201ENST00000374946 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
TMEM235-201ENST00000374946 C8orf34Q49A92 452 aa25.08■■□□□ 1.61
TMEM235-201ENST00000374946 PANK3Q9H999 370 aa25.08■■□□□ 1.61
TMEM235-201ENST00000374946 DISP3Q9P2K9 1392 aa25.07■■□□□ 1.6
TMEM235-201ENST00000374946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.07■■□□□ 1.6
TMEM235-201ENST00000374946 CCDC141Q6ZP82 1450 aa25.07■■□□□ 1.6
TMEM235-201ENST00000374946 ABCC2Q92887 1545 aa25.06■■□□□ 1.6
TMEM235-201ENST00000374946 SYCP2Q9BX26 1530 aa25.05■■□□□ 1.6
TMEM235-201ENST00000374946 GPRASP1Q5JY77 1395 aa25.05■■□□□ 1.6
TMEM235-201ENST00000374946 TESK2Q96S53 571 aa25.05■■□□□ 1.6
TMEM235-201ENST00000374946 ARHGAP5Q13017 1502 aa25.04■■□□□ 1.6
TMEM235-201ENST00000374946 ADAMTS8Q9UP79 889 aa25.04■■□□□ 1.6
TMEM235-201ENST00000374946 RGL3Q3MIN7 710 aa25.02■■□□□ 1.6
TMEM235-201ENST00000374946 PRDM15P57071 1507 aaPredicted RBP25.02■■□□□ 1.6
TMEM235-201ENST00000374946 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
TMEM235-201ENST00000374946 FAM135AQ9P2D6 1515 aa25.02■■□□□ 1.6
TMEM235-201ENST00000374946 LAMC1P11047 1609 aa25.02■■□□□ 1.6
TMEM235-201ENST00000374946 CLASP1Q7Z460 1538 aa25.01■■□□□ 1.59
TMEM235-201ENST00000374946 DUSP27Q5VZP5 1158 aa25.01■■□□□ 1.59
TMEM235-201ENST00000374946 FRAT2O75474 233 aaPredicted RBP25■■□□□ 1.59
TMEM235-201ENST00000374946 PLEKHH1Q9ULM0 1364 aa25■■□□□ 1.59
TMEM235-201ENST00000374946 ERBINQ96RT1 1412 aa24.99■■□□□ 1.59
TMEM235-201ENST00000374946 MYO5CQ9NQX4 1742 aa24.98■■□□□ 1.59
TMEM235-201ENST00000374946 A2MP01023 1474 aa24.97■■□□□ 1.59
TMEM235-201ENST00000374946 RGS3P49796 1198 aa24.96■■□□□ 1.59
TMEM235-201ENST00000374946 RSPH4AQ5TD94 716 aa24.95■■□□□ 1.59
TMEM235-201ENST00000374946 TMF1P82094 1093 aa24.95■■□□□ 1.58
TMEM235-201ENST00000374946 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.94■■□□□ 1.58
TMEM235-201ENST00000374946 ZNF521Q96K83 1311 aa24.94■■□□□ 1.58
TMEM235-201ENST00000374946 ZCCHC11Q5TAX3 1644 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms