RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ZNF644Q9H582 1327 aaPredicted RBP9.06□□□□□ -0.96
CHD6-202ENST00000373222 EIF5BO60841 1220 aaKnown RBP9.06□□□□□ -0.96
CHD6-202ENST00000373222 ARHGEF11O15085 1522 aa9.05□□□□□ -0.96
CHD6-202ENST00000373222 KDM5BQ9UGL1 1544 aa9.05□□□□□ -0.96
CHD6-202ENST00000373222 MRC2Q9UBG0 1479 aa9.05□□□□□ -0.96
CHD6-202ENST00000373222 HECW1Q76N89 1606 aa9.04□□□□□ -0.96
CHD6-202ENST00000373222 WDR62O43379 1518 aa9.04□□□□□ -0.96
CHD6-202ENST00000373222 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
CHD6-202ENST00000373222 DISP1Q96F81 1524 aa9.01□□□□□ -0.97
CHD6-202ENST00000373222 EIF4G3O43432 1585 aaKnown RBP9.01□□□□□ -0.97
CHD6-202ENST00000373222 GCC2Q8IWJ2 1684 aa9.01□□□□□ -0.97
CHD6-202ENST00000373222 MMRN1Q13201 1228 aa9□□□□□ -0.97
CHD6-202ENST00000373222 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
CHD6-202ENST00000373222 KIAA0556O60303 1618 aa8.99□□□□□ -0.97
CHD6-202ENST00000373222 NUP153P49790 1475 aaKnown RBP8.99□□□□□ -0.97
CHD6-202ENST00000373222 TCOF1Q13428 1488 aaKnown RBP8.99□□□□□ -0.97
CHD6-202ENST00000373222 MPHOSPH9Q99550 1183 aa8.97□□□□□ -0.97
CHD6-202ENST00000373222 PRG4Q92954 1404 aaPredicted RBP8.97□□□□□ -0.97
CHD6-202ENST00000373222 PHF12Q96QT6 1004 aa8.97□□□□□ -0.97
CHD6-202ENST00000373222 GRIN2AQ12879 1464 aa8.97□□□□□ -0.97
CHD6-202ENST00000373222 PLB1Q6P1J6 1458 aa8.97□□□□□ -0.97
CHD6-202ENST00000373222 IFT140Q96RY7 1462 aa8.96□□□□□ -0.97
CHD6-202ENST00000373222 HSPA5P11021 654 aaKnown RBP8.96□□□□□ -0.97
CHD6-202ENST00000373222 L3MBTL2Q969R5 705 aa8.96□□□□□ -0.97
CHD6-202ENST00000373222 C11orf95C9JLR9 678 aaPredicted RBP8.96□□□□□ -0.98
CHD6-202ENST00000373222 ANP32CO43423 234 aa8.96□□□□□ -0.98
CHD6-202ENST00000373222 ZNF777Q9ULD5 760 aaPredicted RBP8.96□□□□□ -0.98
CHD6-202ENST00000373222 CEP170Q5SW79 1584 aa8.96□□□□□ -0.98
CHD6-202ENST00000373222 WASHC2AQ641Q2 1341 aa8.96□□□□□ -0.98
CHD6-202ENST00000373222 RAPGEF6Q8TEU7 1601 aa8.96□□□□□ -0.98
CHD6-202ENST00000373222 KIAA0586Q9BVV6 1533 aa8.95□□□□□ -0.98
CHD6-202ENST00000373222 BRPF1P55201 1214 aaPredicted RBP8.95□□□□□ -0.98
CHD6-202ENST00000373222 KIF14Q15058 1648 aa8.95□□□□□ -0.98
CHD6-202ENST00000373222 DAPK1P53355 1430 aa8.95□□□□□ -0.98
CHD6-202ENST00000373222 ABCC5O15440 1437 aa8.95□□□□□ -0.98
CHD6-202ENST00000373222 ERCC6Q03468 1493 aa8.95□□□□□ -0.98
CHD6-202ENST00000373222 NBPF8Q3BBV2 869 aa8.94□□□□□ -0.98
CHD6-202ENST00000373222 CCDC184Q52MB2 194 aa8.94□□□□□ -0.98
CHD6-202ENST00000373222 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
CHD6-202ENST00000373222 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
CHD6-202ENST00000373222 CHMP7Q8WUX9 453 aaPredicted RBP8.93□□□□□ -0.98
CHD6-202ENST00000373222 DNMT1P26358 1616 aaKnown RBP8.93□□□□□ -0.98
CHD6-202ENST00000373222 MIA2Q96PC5 1412 aa8.93□□□□□ -0.98
CHD6-202ENST00000373222 ECM2O94769 699 aaPredicted RBP8.93□□□□□ -0.98
CHD6-202ENST00000373222 CNGB1Q14028 1251 aaPredicted RBP8.93□□□□□ -0.98
CHD6-202ENST00000373222 RGL2O15211 777 aa8.9□□□□□ -0.98
CHD6-202ENST00000373222 STAG3Q9UJ98 1225 aa8.9□□□□□ -0.98
CHD6-202ENST00000373222 CAMSAP2Q08AD1 1489 aa8.9□□□□□ -0.98
CHD6-202ENST00000373222 ANKRD30BQ9BXX2 1392 aa8.9□□□□□ -0.98
CHD6-202ENST00000373222 IRX6P78412 446 aaPredicted RBP8.9□□□□□ -0.99
CHD6-202ENST00000373222 CFDP1Q9UEE9 299 aaPredicted RBP8.9□□□□□ -0.99
CHD6-202ENST00000373222 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
CHD6-202ENST00000373222 CCER2I3L3R5 266 aa8.89□□□□□ -0.99
CHD6-202ENST00000373222 AKNAQ7Z591 1439 aa8.89□□□□□ -0.99
CHD6-202ENST00000373222 ZNF326Q5BKZ1 582 aaKnown RBP8.89□□□□□ -0.99
CHD6-202ENST00000373222 JPH4Q96JJ6 628 aa8.89□□□□□ -0.99
CHD6-202ENST00000373222 TEX14Q8IWB6 1497 aa8.88□□□□□ -0.99
CHD6-202ENST00000373222 EIF4G2P78344 907 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD6-202ENST00000373222 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
CHD6-202ENST00000373222 HNRNPUQ00839 825 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD6-202ENST00000373222 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
CHD6-202ENST00000373222 PZPP20742 1482 aa8.87□□□□□ -0.99
CHD6-202ENST00000373222 TROQ12816 1431 aaPredicted RBP8.87□□□□□ -0.99
CHD6-202ENST00000373222 RPRD2Q5VT52 1461 aaKnown RBP8.87□□□□□ -0.99
CHD6-202ENST00000373222 CCDC9Q9Y3X0 531 aaKnown RBP8.87□□□□□ -0.99
CHD6-202ENST00000373222 CDC42BPAQ5VT25 1732 aa8.86□□□□□ -0.99
CHD6-202ENST00000373222 MS4A3Q96HJ5 214 aa8.86□□□□□ -0.99
CHD6-202ENST00000373222 NCOA1Q15788 1441 aa8.86□□□□□ -0.99
CHD6-202ENST00000373222 MAGI1Q96QZ7 1491 aaPredicted RBP8.86□□□□□ -0.99
CHD6-202ENST00000373222 ROCK1Q13464 1354 aa8.86□□□□□ -0.99
CHD6-202ENST00000373222 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
CHD6-202ENST00000373222 POLR3GLQ9BT43 218 aa8.85□□□□□ -0.99
CHD6-202ENST00000373222 CROCC2H7BZ55 1655 aa8.85□□□□□ -0.99
CHD6-202ENST00000373222 ARID3AQ99856 593 aa8.85□□□□□ -0.99
CHD6-202ENST00000373222 CCDC7Q96M83 1385 aa8.84□□□□□ -0.99
CHD6-202ENST00000373222 PROM2Q8N271 834 aa8.84□□□□□ -0.99
CHD6-202ENST00000373222 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
CHD6-202ENST00000373222 ITSN2Q9NZM3 1697 aa8.84□□□□□ -0.99
CHD6-202ENST00000373222 CNTLNQ9NXG0 1405 aa8.84□□□□□ -0.99
CHD6-202ENST00000373222 FAM9BQ8IZU0 186 aa8.83□□□□□ -1
CHD6-202ENST00000373222 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
CHD6-202ENST00000373222 NUP160Q12769 1436 aa8.83□□□□□ -1
CHD6-202ENST00000373222 BCORL1Q5H9F3 1711 aa8.83□□□□□ -1
CHD6-202ENST00000373222 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -16e-8■■■■■ 31.3
CHD6-202ENST00000373222 ATP10BO94823 1461 aa8.83□□□□□ -1
CHD6-202ENST00000373222 ADCY10Q96PN6 1610 aa8.82□□□□□ -1
CHD6-202ENST00000373222 SPATA31E1Q6ZUB1 1445 aa8.82□□□□□ -1
CHD6-202ENST00000373222 PRKRIP1Q9H875 184 aaPredicted RBP8.81□□□□□ -1
CHD6-202ENST00000373222 ABCA8O94911 1581 aa8.81□□□□□ -1
CHD6-202ENST00000373222 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
CHD6-202ENST00000373222 IGSF3O75054 1194 aa8.8□□□□□ -1
CHD6-202ENST00000373222 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
CHD6-202ENST00000373222 ABCC10Q5T3U5 1492 aa8.8□□□□□ -1
CHD6-202ENST00000373222 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
CHD6-202ENST00000373222 PLEKHD1A6NEE1 506 aa8.8□□□□□ -1
CHD6-202ENST00000373222 CHGAP10645 457 aaKnown RBP8.8□□□□□ -1
CHD6-202ENST00000373222 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
CHD6-202ENST00000373222 NECTIN2Q92692 538 aa8.8□□□□□ -1
CHD6-202ENST00000373222 C1orf115Q9H7X2 142 aa8.8□□□□□ -1
CHD6-202ENST00000373222 ST18O60284 1047 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms