RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 HNRNPUQ00839 825 aaKnown RBP eCLIP28.41■■■□□ 2.148e-7■□□□□ 10.9
VEGFA-204ENST00000372064 FKBP8Q14318 412 aa28.41■■■□□ 2.14
VEGFA-204ENST00000372064 DHX29Q7Z478 1369 aaKnown RBP28.4■■■□□ 2.14
VEGFA-204ENST00000372064 PLA2R1Q13018 1463 aa28.4■■■□□ 2.14
VEGFA-204ENST00000372064 CARD11Q9BXL7 1154 aa28.39■■■□□ 2.14
VEGFA-204ENST00000372064 ARAP3Q8WWN8 1544 aa28.39■■■□□ 2.14
VEGFA-204ENST00000372064 CCDC144AA2RUR9 1427 aa28.39■■■□□ 2.13
VEGFA-204ENST00000372064 TRAPPC8Q9Y2L5 1435 aa28.37■■■□□ 2.13
VEGFA-204ENST00000372064 POLR3GLQ9BT43 218 aa28.36■■■□□ 2.13
VEGFA-204ENST00000372064 ATP10AO60312 1499 aa28.34■■■□□ 2.13
VEGFA-204ENST00000372064 TRPM1Q7Z4N2 1603 aa28.34■■■□□ 2.13
VEGFA-204ENST00000372064 NEFLP07196 543 aa28.34■■■□□ 2.13
VEGFA-204ENST00000372064 ROCK2O75116 1388 aaKnown RBP28.33■■■□□ 2.13
VEGFA-204ENST00000372064 PRAG1Q86YV5 1406 aa28.33■■■□□ 2.13
VEGFA-204ENST00000372064 MRS2Q9HD23 443 aa28.31■■■□□ 2.12
VEGFA-204ENST00000372064 RGL3Q3MIN7 710 aa28.3■■■□□ 2.12
VEGFA-204ENST00000372064 AFAP1Q8N556 730 aa28.28■■■□□ 2.12
VEGFA-204ENST00000372064 ST20-MTHFSA0A0A6YYL1 179 aa28.27■■■□□ 2.12
VEGFA-204ENST00000372064 BCANQ96GW7 911 aa28.27■■■□□ 2.12
VEGFA-204ENST00000372064 A2MP01023 1474 aa28.27■■■□□ 2.12
VEGFA-204ENST00000372064 WDR7Q9Y4E6 1490 aa28.27■■■□□ 2.12
VEGFA-204ENST00000372064 RTEL1-TNFRSF6BF6WH68 1400 aa28.27■■■□□ 2.12
VEGFA-204ENST00000372064 SPAG9O60271 1321 aaKnown RBP28.26■■■□□ 2.11
VEGFA-204ENST00000372064 LAMC1P11047 1609 aa28.25■■■□□ 2.11
VEGFA-204ENST00000372064 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
VEGFA-204ENST00000372064 ZFYVE16Q7Z3T8 1539 aa28.24■■■□□ 2.11
VEGFA-204ENST00000372064 GPRASP1Q5JY77 1395 aa28.23■■■□□ 2.11
VEGFA-204ENST00000372064 E9PCH4 1651 aa28.22■■■□□ 2.11
VEGFA-204ENST00000372064 ABCA9Q8IUA7 1624 aa28.22■■■□□ 2.11
VEGFA-204ENST00000372064 CNGB1Q14028 1251 aaPredicted RBP28.22■■■□□ 2.11
VEGFA-204ENST00000372064 ZBED9Q6R2W3 1325 aa28.2■■■□□ 2.11
VEGFA-204ENST00000372064 EIF2AK4Q9P2K8 1649 aaKnown RBP28.19■■■□□ 2.1
VEGFA-204ENST00000372064 NBPF1Q3BBV0 1214 aa28.18■■■□□ 2.1
VEGFA-204ENST00000372064 DEPDC5O75140 1603 aa28.17■■■□□ 2.1
VEGFA-204ENST00000372064 PRDM15P57071 1507 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-204ENST00000372064 FANCAO15360 1455 aa28.17■■■□□ 2.1
VEGFA-204ENST00000372064 TSHZ2Q9NRE2 1034 aa28.15■■■□□ 2.1
VEGFA-204ENST00000372064 INO80Q9ULG1 1556 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-204ENST00000372064 ASXL2Q76L83 1435 aa28.12■■■□□ 2.09
VEGFA-204ENST00000372064 KTN1Q86UP2 1357 aaKnown RBP28.1■■■□□ 2.09
VEGFA-204ENST00000372064 ATP7AQ04656 1500 aa28.1■■■□□ 2.09
VEGFA-204ENST00000372064 TRPM2O94759 1503 aa28.09■■■□□ 2.09
VEGFA-204ENST00000372064 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
VEGFA-204ENST00000372064 SCAPERQ9BY12 1400 aa28.07■■■□□ 2.08
VEGFA-204ENST00000372064 ADGRL1O94910 1474 aa28.07■■■□□ 2.08
VEGFA-204ENST00000372064 VWDEQ8N2E2 1590 aa28.06■■■□□ 2.08
VEGFA-204ENST00000372064 PTPRTO14522 1441 aa28.06■■■□□ 2.08
VEGFA-204ENST00000372064 COL17A1Q9UMD9 1497 aaPredicted RBP28.06■■■□□ 2.08
VEGFA-204ENST00000372064 TET3O43151 1660 aa28.05■■■□□ 2.08
VEGFA-204ENST00000372064 MYT1LQ9UL68 1186 aa28.05■■■□□ 2.08
VEGFA-204ENST00000372064 SPHKAPQ2M3C7 1700 aa28.05■■■□□ 2.08
VEGFA-204ENST00000372064 OSCARQ8IYS5 282 aa28.04■■■□□ 2.08
VEGFA-204ENST00000372064 CEP152O94986 1710 aa28.03■■■□□ 2.08
VEGFA-204ENST00000372064 ERICH6BQ5W0A0 696 aa28.01■■■□□ 2.07
VEGFA-204ENST00000372064 MADDQ8WXG6 1647 aa28.01■■■□□ 2.07
VEGFA-204ENST00000372064 RALBP1Q15311 655 aa28.01■■■□□ 2.07
VEGFA-204ENST00000372064 TESK2Q96S53 571 aa28■■■□□ 2.07
VEGFA-204ENST00000372064 KIF3BO15066 747 aa28■■■□□ 2.07
VEGFA-204ENST00000372064 PNISRQ8TF01 805 aaKnown RBP28■■■□□ 2.07
VEGFA-204ENST00000372064 BRD4O60885 1362 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-204ENST00000372064 MYBBP1AQ9BQG0 1328 aaKnown RBP27.98■■■□□ 2.07
VEGFA-204ENST00000372064 CLTCL1P53675 1640 aa27.98■■■□□ 2.07
VEGFA-204ENST00000372064 NPM1P06748 294 aaKnown RBP eCLIP27.96■■■□□ 2.07
VEGFA-204ENST00000372064 KANK1Q14678 1352 aa27.96■■■□□ 2.07
VEGFA-204ENST00000372064 MROH1Q8NDA8 1641 aa27.96■■■□□ 2.07
VEGFA-204ENST00000372064 LRPPRCP42704 1394 aaKnown RBP27.95■■■□□ 2.06
VEGFA-204ENST00000372064 DISP3Q9P2K9 1392 aa27.95■■■□□ 2.06
VEGFA-204ENST00000372064 IRX6P78412 446 aaPredicted RBP27.95■■■□□ 2.06
VEGFA-204ENST00000372064 SMG6Q86US8 1419 aaKnown RBP27.95■■■□□ 2.06
VEGFA-204ENST00000372064 NEURL4Q96JN8 1562 aa27.95■■■□□ 2.06
VEGFA-204ENST00000372064 TMC1Q8TDI8 760 aa27.94■■■□□ 2.06
VEGFA-204ENST00000372064 PARD3Q8TEW0 1356 aa27.93■■■□□ 2.06
VEGFA-204ENST00000372064 STAC3Q96MF2 364 aa27.93■■■□□ 2.06
VEGFA-204ENST00000372064 IQGAP1P46940 1657 aa27.92■■■□□ 2.06
VEGFA-204ENST00000372064 PER1O15534 1290 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-204ENST00000372064 KIDINS220Q9ULH0 1771 aa27.9■■■□□ 2.06
VEGFA-204ENST00000372064 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
VEGFA-204ENST00000372064 TMF1P82094 1093 aa27.86■■■□□ 2.05
VEGFA-204ENST00000372064 ZNF518AQ6AHZ1 1483 aa27.86■■■□□ 2.05
VEGFA-204ENST00000372064 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
VEGFA-204ENST00000372064 CFAP74Q9C0B2 1584 aa27.83■■■□□ 2.05
VEGFA-204ENST00000372064 KIAA1210Q9ULL0 1709 aa27.83■■■□□ 2.05
VEGFA-204ENST00000372064 EFCAB6Q5THR3 1501 aa27.83■■■□□ 2.05
VEGFA-204ENST00000372064 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
VEGFA-204ENST00000372064 NUDCQ9Y266 331 aa27.83■■■□□ 2.05
VEGFA-204ENST00000372064 PPP4R2Q9NY27 417 aa27.82■■■□□ 2.04
VEGFA-204ENST00000372064 LMTK2Q8IWU2 1503 aa27.82■■■□□ 2.04
VEGFA-204ENST00000372064 SENP3-EIF4A1A0A087X0R7 540 aa27.81■■■□□ 2.04
VEGFA-204ENST00000372064 SCAF11Q99590 1463 aaKnown RBP27.81■■■□□ 2.04
VEGFA-204ENST00000372064 PANK3Q9H999 370 aa27.79■■■□□ 2.04
VEGFA-204ENST00000372064 UGGT1Q9NYU2 1555 aa27.78■■■□□ 2.04
VEGFA-204ENST00000372064 PPRC1Q5VV67 1664 aaKnown RBP27.78■■■□□ 2.04
VEGFA-204ENST00000372064 RNF123Q5XPI4 1314 aa27.77■■■□□ 2.04
VEGFA-204ENST00000372064 MYOM2P54296 1465 aa27.77■■■□□ 2.04
VEGFA-204ENST00000372064 POGZQ7Z3K3 1410 aa27.76■■■□□ 2.03
VEGFA-204ENST00000372064 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
VEGFA-204ENST00000372064 CC2D1BQ5T0F9 858 aaKnown RBP27.74■■■□□ 2.03
VEGFA-204ENST00000372064 IFT172Q9UG01 1749 aa27.73■■■□□ 2.03
VEGFA-204ENST00000372064 MLH3Q9UHC1 1453 aa27.73■■■□□ 2.03
VEGFA-204ENST00000372064 KIF1BO60333 1816 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms