RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 MRS2Q9HD23 443 aa39.84■■■■□ 3.97
SSBP3-204ENST00000371320 CCDC144AA2RUR9 1427 aa39.84■■■■□ 3.97
SSBP3-204ENST00000371320 DUOX2Q9NRD8 1548 aa39.82■■■■□ 3.96
SSBP3-204ENST00000371320 POLR3GLQ9BT43 218 aa39.82■■■■□ 3.96
SSBP3-204ENST00000371320 DHX29Q7Z478 1369 aaKnown RBP39.77■■■■□ 3.96
SSBP3-204ENST00000371320 IQGAP3Q86VI3 1631 aa39.76■■■■□ 3.96
SSBP3-204ENST00000371320 FAM9BQ8IZU0 186 aa39.76■■■■□ 3.95
SSBP3-204ENST00000371320 ERBINQ96RT1 1412 aa39.75■■■■□ 3.95
SSBP3-204ENST00000371320 PLA2R1Q13018 1463 aa39.74■■■■□ 3.95
SSBP3-204ENST00000371320 ABCC1P33527 1531 aa39.74■■■■□ 3.95
SSBP3-204ENST00000371320 ROCK2O75116 1388 aaKnown RBP39.72■■■■□ 3.95
SSBP3-204ENST00000371320 ST20-MTHFSA0A0A6YYL1 179 aa39.69■■■■□ 3.94
SSBP3-204ENST00000371320 TRAPPC8Q9Y2L5 1435 aa39.68■■■■□ 3.94
SSBP3-204ENST00000371320 MAGI2Q86UL8 1455 aa39.68■■■■□ 3.94
SSBP3-204ENST00000371320 PRAG1Q86YV5 1406 aa39.67■■■■□ 3.94
SSBP3-204ENST00000371320 RGL3Q3MIN7 710 aa39.66■■■■□ 3.94
SSBP3-204ENST00000371320 ARAP3Q8WWN8 1544 aa39.61■■■■□ 3.93
SSBP3-204ENST00000371320 ATP10AO60312 1499 aa39.59■■■■□ 3.93
SSBP3-204ENST00000371320 TRPM1Q7Z4N2 1603 aa39.59■■■■□ 3.93
SSBP3-204ENST00000371320 SPAG9O60271 1321 aaKnown RBP39.59■■■■□ 3.93
SSBP3-204ENST00000371320 A2MP01023 1474 aa39.58■■■■□ 3.93
SSBP3-204ENST00000371320 ZBED9Q6R2W3 1325 aa39.56■■■■□ 3.92
SSBP3-204ENST00000371320 CNGB1Q14028 1251 aaPredicted RBP39.56■■■■□ 3.92
SSBP3-204ENST00000371320 WDR7Q9Y4E6 1490 aa39.55■■■■□ 3.92
SSBP3-204ENST00000371320 RTEL1-TNFRSF6BF6WH68 1400 aa39.55■■■■□ 3.92
SSBP3-204ENST00000371320 TSHZ2Q9NRE2 1034 aa39.54■■■■□ 3.92
SSBP3-204ENST00000371320 OSCARQ8IYS5 282 aa39.53■■■■□ 3.92
SSBP3-204ENST00000371320 AFAP1Q8N556 730 aa39.53■■■■□ 3.92
SSBP3-204ENST00000371320 GPRASP1Q5JY77 1395 aa39.5■■■■□ 3.91
SSBP3-204ENST00000371320 NBPF1Q3BBV0 1214 aa39.49■■■■□ 3.91
SSBP3-204ENST00000371320 ZFYVE16Q7Z3T8 1539 aa39.46■■■■□ 3.91
SSBP3-204ENST00000371320 FANCAO15360 1455 aa39.42■■■■□ 3.9
SSBP3-204ENST00000371320 EIF2AK4Q9P2K8 1649 aaKnown RBP39.41■■■■□ 3.9
SSBP3-204ENST00000371320 LAMC1P11047 1609 aa39.4■■■■□ 3.9
SSBP3-204ENST00000371320 ABCA9Q8IUA7 1624 aa39.38■■■■□ 3.89
SSBP3-204ENST00000371320 PRDM15P57071 1507 aaPredicted RBP39.36■■■■□ 3.89
SSBP3-204ENST00000371320 KTN1Q86UP2 1357 aaKnown RBP39.36■■■■□ 3.89
SSBP3-204ENST00000371320 E9PCH4 1651 aa39.36■■■■□ 3.89
SSBP3-204ENST00000371320 TMC1Q8TDI8 760 aa39.34■■■■□ 3.89
SSBP3-204ENST00000371320 IRX6P78412 446 aaPredicted RBP39.33■■■■□ 3.89
SSBP3-204ENST00000371320 RALBP1Q15311 655 aa39.33■■■■□ 3.89
SSBP3-204ENST00000371320 ATP7AQ04656 1500 aa39.32■■■■□ 3.89
SSBP3-204ENST00000371320 PNISRQ8TF01 805 aaKnown RBP39.3■■■■□ 3.88
SSBP3-204ENST00000371320 ASXL2Q76L83 1435 aa39.3■■■■□ 3.88
SSBP3-204ENST00000371320 INO80Q9ULG1 1556 aaPredicted RBP39.29■■■■□ 3.88
SSBP3-204ENST00000371320 ADGRL1O94910 1474 aa39.28■■■■□ 3.88
SSBP3-204ENST00000371320 DEPDC5O75140 1603 aa39.28■■■■□ 3.88
SSBP3-204ENST00000371320 MYBBP1AQ9BQG0 1328 aaKnown RBP39.28■■■■□ 3.88
SSBP3-204ENST00000371320 ERICH6BQ5W0A0 696 aa39.28■■■■□ 3.88
SSBP3-204ENST00000371320 SCAPERQ9BY12 1400 aa39.28■■■■□ 3.88
SSBP3-204ENST00000371320 TRPM2O94759 1503 aa39.26■■■■□ 3.88
SSBP3-204ENST00000371320 TESK2Q96S53 571 aa39.26■■■■□ 3.88
SSBP3-204ENST00000371320 COL17A1Q9UMD9 1497 aaPredicted RBP39.26■■■■□ 3.88
SSBP3-204ENST00000371320 MYT1LQ9UL68 1186 aa39.26■■■■□ 3.88
SSBP3-204ENST00000371320 KANK1Q14678 1352 aa39.25■■■■□ 3.87
SSBP3-204ENST00000371320 BRD4O60885 1362 aaPredicted RBP39.24■■■■□ 3.87
SSBP3-204ENST00000371320 PTPRTO14522 1441 aa39.24■■■■□ 3.87
SSBP3-204ENST00000371320 DISP3Q9P2K9 1392 aa39.2■■■■□ 3.87
SSBP3-204ENST00000371320 TET3O43151 1660 aa39.19■■■■□ 3.86
SSBP3-204ENST00000371320 KIF3BO15066 747 aa39.19■■■■□ 3.86
SSBP3-204ENST00000371320 SPHKAPQ2M3C7 1700 aa39.19■■■■□ 3.86
SSBP3-204ENST00000371320 RNF17Q9BXT8 1623 aaKnown RBP39.18■■■■□ 3.86
SSBP3-204ENST00000371320 SMG6Q86US8 1419 aaKnown RBP39.17■■■■□ 3.86
SSBP3-204ENST00000371320 TMF1P82094 1093 aa39.17■■■■□ 3.86
SSBP3-204ENST00000371320 VWDEQ8N2E2 1590 aa39.16■■■■□ 3.86
SSBP3-204ENST00000371320 STAC3Q96MF2 364 aa39.15■■■■□ 3.86
SSBP3-204ENST00000371320 PER1O15534 1290 aaPredicted RBP39.14■■■■□ 3.86
SSBP3-204ENST00000371320 CEP152O94986 1710 aa39.14■■■■□ 3.86
SSBP3-204ENST00000371320 MADDQ8WXG6 1647 aa39.13■■■■□ 3.86
SSBP3-204ENST00000371320 CLTCL1P53675 1640 aa39.13■■■■□ 3.85
SSBP3-204ENST00000371320 LRPPRCP42704 1394 aaKnown RBP39.13■■■■□ 3.85
SSBP3-204ENST00000371320 PARD3Q8TEW0 1356 aa39.13■■■■□ 3.85
SSBP3-204ENST00000371320 NPM1P06748 294 aaKnown RBP eCLIP39.12■■■■□ 3.85
SSBP3-204ENST00000371320 PPP4R2Q9NY27 417 aa39.1■■■■□ 3.85
SSBP3-204ENST00000371320 NLRP13Q86W25 1043 aa39.09■■■■□ 3.85
SSBP3-204ENST00000371320 NUDCQ9Y266 331 aa39.09■■■■□ 3.85
SSBP3-204ENST00000371320 WASHC2CQ9Y4E1 1318 aa39.08■■■■□ 3.85
SSBP3-204ENST00000371320 PANK3Q9H999 370 aa39.04■■■■□ 3.84
SSBP3-204ENST00000371320 MROH1Q8NDA8 1641 aa39.02■■■■□ 3.84
SSBP3-204ENST00000371320 ZNF518AQ6AHZ1 1483 aa39.01■■■■□ 3.83
SSBP3-204ENST00000371320 KIDINS220Q9ULH0 1771 aa38.99■■■■□ 3.83
SSBP3-204ENST00000371320 IQGAP1P46940 1657 aa38.98■■■■□ 3.83
SSBP3-204ENST00000371320 SENP3-EIF4A1A0A087X0R7 540 aa38.96■■■■□ 3.83
SSBP3-204ENST00000371320 SCAF11Q99590 1463 aaKnown RBP38.96■■■■□ 3.83
SSBP3-204ENST00000371320 CC2D1BQ5T0F9 858 aaKnown RBP38.96■■■■□ 3.83
SSBP3-204ENST00000371320 NEURL4Q96JN8 1562 aa38.95■■■■□ 3.83
SSBP3-204ENST00000371320 CD109Q6YHK3 1445 aa38.93■■■■□ 3.82
SSBP3-204ENST00000371320 EFCAB6Q5THR3 1501 aa38.91■■■■□ 3.82
SSBP3-204ENST00000371320 RBM19Q9Y4C8 960 aaKnown RBP38.9■■■■□ 3.82
SSBP3-204ENST00000371320 CDCA8Q53HL2 280 aa38.88■■■■□ 3.81
SSBP3-204ENST00000371320 CFAP74Q9C0B2 1584 aa38.87■■■■□ 3.81
SSBP3-204ENST00000371320 RNF123Q5XPI4 1314 aa38.87■■■■□ 3.81
SSBP3-204ENST00000371320 UGGT1Q9NYU2 1555 aa38.86■■■■□ 3.81
SSBP3-204ENST00000371320 POGZQ7Z3K3 1410 aa38.85■■■■□ 3.81
SSBP3-204ENST00000371320 LMTK2Q8IWU2 1503 aa38.84■■■■□ 3.81
SSBP3-204ENST00000371320 EIF3AQ14152 1382 aaKnown RBP38.84■■■■□ 3.81
SSBP3-204ENST00000371320 KIAA1210Q9ULL0 1709 aa38.83■■■■□ 3.81
SSBP3-204ENST00000371320 PPRC1Q5VV67 1664 aaKnown RBP38.82■■■■□ 3.81
SSBP3-204ENST00000371320 MYOM2P54296 1465 aa38.81■■■■□ 3.8
SSBP3-204ENST00000371320 B4GALNT3Q6L9W6 998 aa38.81■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms