RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
GBF1-201ENST00000369983 RALBP1Q15311 655 aa16.48■□□□□ 0.23
GBF1-201ENST00000369983 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
GBF1-201ENST00000369983 RAD21O60216 631 aa16.47■□□□□ 0.23
GBF1-201ENST00000369983 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
GBF1-201ENST00000369983 FOXD1Q16676 465 aa16.47■□□□□ 0.23
GBF1-201ENST00000369983 CREBRFQ8IUR6 639 aa16.47■□□□□ 0.23
GBF1-201ENST00000369983 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
GBF1-201ENST00000369983 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
GBF1-201ENST00000369983 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
GBF1-201ENST00000369983 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
GBF1-201ENST00000369983 SYTL4Q96C24 671 aaPredicted RBP16.45■□□□□ 0.22
GBF1-201ENST00000369983 AKAP17AQ02040 695 aaKnown RBP16.45■□□□□ 0.22
GBF1-201ENST00000369983 SYAP1Q96A49 352 aaPredicted RBP16.45■□□□□ 0.22
GBF1-201ENST00000369983 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
GBF1-201ENST00000369983 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
GBF1-201ENST00000369983 SMC4Q9NTJ3 1288 aa16.44■□□□□ 0.22
GBF1-201ENST00000369983 GBP4Q96PP9 640 aa16.43■□□□□ 0.22
GBF1-201ENST00000369983 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.227e-7■■■■□ 21.7
GBF1-201ENST00000369983 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
GBF1-201ENST00000369983 WASHC2AQ641Q2 1341 aa16.42■□□□□ 0.22
GBF1-201ENST00000369983 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
GBF1-201ENST00000369983 VPS37DQ86XT2 251 aa16.42■□□□□ 0.22
GBF1-201ENST00000369983 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
GBF1-201ENST00000369983 COG3Q96JB2 828 aa16.41■□□□□ 0.22
GBF1-201ENST00000369983 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
GBF1-201ENST00000369983 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
GBF1-201ENST00000369983 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
GBF1-201ENST00000369983 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
GBF1-201ENST00000369983 ATF3P18847 181 aa16.4■□□□□ 0.22
GBF1-201ENST00000369983 PSME1Q06323 249 aa16.4■□□□□ 0.22
GBF1-201ENST00000369983 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
GBF1-201ENST00000369983 TEFQ10587 303 aa16.39■□□□□ 0.21
GBF1-201ENST00000369983 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
GBF1-201ENST00000369983 NEXNQ0ZGT2 675 aa16.39■□□□□ 0.21
GBF1-201ENST00000369983 TPM2P07951 284 aa16.39■□□□□ 0.21
GBF1-201ENST00000369983 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
GBF1-201ENST00000369983 TPM3P06753 285 aa16.38■□□□□ 0.21
GBF1-201ENST00000369983 TPD52L1Q16890 204 aaPredicted RBP16.38■□□□□ 0.21
GBF1-201ENST00000369983 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
GBF1-201ENST00000369983 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
GBF1-201ENST00000369983 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
GBF1-201ENST00000369983 USP35Q9P2H5 1018 aa16.37■□□□□ 0.21
GBF1-201ENST00000369983 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
GBF1-201ENST00000369983 WWC1Q8IX03 1113 aa16.36■□□□□ 0.21
GBF1-201ENST00000369983 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
GBF1-201ENST00000369983 ANO8Q9HCE9 1232 aaPredicted RBP16.36■□□□□ 0.21
GBF1-201ENST00000369983 NGEFQ8N5V2 710 aa16.35■□□□□ 0.21
GBF1-201ENST00000369983 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
GBF1-201ENST00000369983 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
GBF1-201ENST00000369983 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
GBF1-201ENST00000369983 PES1O00541 588 aaKnown RBP16.35■□□□□ 0.21
GBF1-201ENST00000369983 CCDC43Q96MW1 224 aaKnown RBP16.34■□□□□ 0.21
GBF1-201ENST00000369983 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
GBF1-201ENST00000369983 GOLGA6L1Q8N7Z2 621 aa16.34■□□□□ 0.21
GBF1-201ENST00000369983 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
GBF1-201ENST00000369983 PTPRGP23470 1445 aa16.33■□□□□ 0.2
GBF1-201ENST00000369983 TSR1Q2NL82 804 aaKnown RBP16.33■□□□□ 0.2
GBF1-201ENST00000369983 EVC2Q86UK5 1308 aa16.32■□□□□ 0.2
GBF1-201ENST00000369983 H3BQV1 296 aa16.32■□□□□ 0.2
GBF1-201ENST00000369983 IFFO2Q5TF58 517 aa16.32■□□□□ 0.2
GBF1-201ENST00000369983 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
GBF1-201ENST00000369983 CCDC47Q96A33 483 aaKnown RBP16.3■□□□□ 0.2
GBF1-201ENST00000369983 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
GBF1-201ENST00000369983 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
GBF1-201ENST00000369983 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
GBF1-201ENST00000369983 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
GBF1-201ENST00000369983 FAM184AQ8NB25 1140 aa16.3■□□□□ 0.2
GBF1-201ENST00000369983 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
GBF1-201ENST00000369983 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
GBF1-201ENST00000369983 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
GBF1-201ENST00000369983 TRIM29Q14134 588 aa16.28■□□□□ 0.2
GBF1-201ENST00000369983 CPLX2Q6PUV4 134 aaKnown RBP16.28■□□□□ 0.2
GBF1-201ENST00000369983 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
GBF1-201ENST00000369983 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
GBF1-201ENST00000369983 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
GBF1-201ENST00000369983 FAM69CQ0P6D2 419 aa16.27■□□□□ 0.2
GBF1-201ENST00000369983 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
GBF1-201ENST00000369983 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
GBF1-201ENST00000369983 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
GBF1-201ENST00000369983 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.19
GBF1-201ENST00000369983 APPP05067 770 aa16.27■□□□□ 0.19
GBF1-201ENST00000369983 ST18O60284 1047 aa16.26■□□□□ 0.19
GBF1-201ENST00000369983 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
GBF1-201ENST00000369983 RILPL2Q969X0 211 aa16.26■□□□□ 0.19
GBF1-201ENST00000369983 TPM1P09493 284 aa16.25■□□□□ 0.19
GBF1-201ENST00000369983 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
GBF1-201ENST00000369983 ERICH2A1L162 156 aa16.24■□□□□ 0.19
GBF1-201ENST00000369983 RAPGEF4Q8WZA2 1011 aa16.24■□□□□ 0.19
GBF1-201ENST00000369983 PPP1R1BQ9UD71 204 aaPredicted RBP16.24■□□□□ 0.19
GBF1-201ENST00000369983 PHF14O94880 888 aa16.24■□□□□ 0.19
GBF1-201ENST00000369983 WWC2Q6AWC2 1192 aa16.22■□□□□ 0.19
GBF1-201ENST00000369983 MINK1Q8N4C8 1332 aaPredicted RBP16.22■□□□□ 0.19
GBF1-201ENST00000369983 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
GBF1-201ENST00000369983 CLUAP1Q96AJ1 413 aa16.22■□□□□ 0.19
GBF1-201ENST00000369983 TRDNQ13061 729 aa16.21■□□□□ 0.19
GBF1-201ENST00000369983 RUFY2Q8WXA3 655 aa16.21■□□□□ 0.19
GBF1-201ENST00000369983 PCMTD1Q96MG8 357 aaPredicted RBP16.21■□□□□ 0.19
GBF1-201ENST00000369983 NLRP13Q86W25 1043 aa16.2■□□□□ 0.18
GBF1-201ENST00000369983 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms