RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 IQGAP3Q86VI3 1631 aa25.1■■□□□ 1.61
LMNA-207ENST00000368301 CCDC144AA2RUR9 1427 aa25.1■■□□□ 1.61
LMNA-207ENST00000368301 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
LMNA-207ENST00000368301 HNRNPUQ00839 825 aaKnown RBP eCLIP25.08■■□□□ 1.61
LMNA-207ENST00000368301 RGL3Q3MIN7 710 aa25.08■■□□□ 1.61
LMNA-207ENST00000368301 WDR7Q9Y4E6 1490 aa25.07■■□□□ 1.6
LMNA-207ENST00000368301 ERBINQ96RT1 1412 aa25.07■■□□□ 1.6
LMNA-207ENST00000368301 MAGI2Q86UL8 1455 aa25.06■■□□□ 1.6
LMNA-207ENST00000368301 DHX29Q7Z478 1369 aaKnown RBP25.03■■□□□ 1.6
LMNA-207ENST00000368301 SPAG9O60271 1321 aaKnown RBP25.03■■□□□ 1.6
LMNA-207ENST00000368301 CNGB1Q14028 1251 aaPredicted RBP25.03■■□□□ 1.6
LMNA-207ENST00000368301 ST20-MTHFSA0A0A6YYL1 179 aa25.02■■□□□ 1.6
LMNA-207ENST00000368301 FKBP8Q14318 412 aa25.02■■□□□ 1.6
LMNA-207ENST00000368301 A2MP01023 1474 aa25.01■■□□□ 1.59
LMNA-207ENST00000368301 ARAP3Q8WWN8 1544 aa25.01■■□□□ 1.59
LMNA-207ENST00000368301 PRAG1Q86YV5 1406 aa25.01■■□□□ 1.59
LMNA-207ENST00000368301 ZFYVE16Q7Z3T8 1539 aa25■■□□□ 1.59
LMNA-207ENST00000368301 ROCK2O75116 1388 aaKnown RBP25■■□□□ 1.59
LMNA-207ENST00000368301 BCANQ96GW7 911 aa25■■□□□ 1.59
LMNA-207ENST00000368301 MRS2Q9HD23 443 aa25■■□□□ 1.59
LMNA-207ENST00000368301 FAM9BQ8IZU0 186 aa24.97■■□□□ 1.59
LMNA-207ENST00000368301 FANCAO15360 1455 aa24.97■■□□□ 1.59
LMNA-207ENST00000368301 TRPM1Q7Z4N2 1603 aa24.97■■□□□ 1.59
LMNA-207ENST00000368301 NBPF1Q3BBV0 1214 aa24.97■■□□□ 1.59
LMNA-207ENST00000368301 ABCA9Q8IUA7 1624 aa24.96■■□□□ 1.59
LMNA-207ENST00000368301 ASXL2Q76L83 1435 aa24.95■■□□□ 1.59
LMNA-207ENST00000368301 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.58
LMNA-207ENST00000368301 ARID4BQ4LE39 1312 aaPredicted RBP24.94■■□□□ 1.58
LMNA-207ENST00000368301 ATP10AO60312 1499 aa24.93■■□□□ 1.58
LMNA-207ENST00000368301 E9PCH4 1651 aa24.9■■□□□ 1.58
LMNA-207ENST00000368301 ATP7AQ04656 1500 aa24.89■■□□□ 1.58
LMNA-207ENST00000368301 SCAPERQ9BY12 1400 aa24.89■■□□□ 1.58
LMNA-207ENST00000368301 ADGRL1O94910 1474 aa24.89■■□□□ 1.57
LMNA-207ENST00000368301 INO80Q9ULG1 1556 aaPredicted RBP24.88■■□□□ 1.57
LMNA-207ENST00000368301 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
LMNA-207ENST00000368301 NEFLP07196 543 aa24.86■■□□□ 1.57
LMNA-207ENST00000368301 MYT1LQ9UL68 1186 aa24.86■■□□□ 1.57
LMNA-207ENST00000368301 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
LMNA-207ENST00000368301 DEPDC5O75140 1603 aa24.84■■□□□ 1.57
LMNA-207ENST00000368301 KIF3BO15066 747 aa24.81■■□□□ 1.56
LMNA-207ENST00000368301 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
LMNA-207ENST00000368301 TRPM2O94759 1503 aa24.79■■□□□ 1.56
LMNA-207ENST00000368301 LAMC1P11047 1609 aa24.77■■□□□ 1.56
LMNA-207ENST00000368301 SPHKAPQ2M3C7 1700 aa24.77■■□□□ 1.56
LMNA-207ENST00000368301 CLTCL1P53675 1640 aa24.77■■□□□ 1.56
LMNA-207ENST00000368301 EIF2AK4Q9P2K8 1649 aaKnown RBP24.77■■□□□ 1.56
LMNA-207ENST00000368301 PTPRTO14522 1441 aa24.77■■□□□ 1.56
LMNA-207ENST00000368301 TESK2Q96S53 571 aa24.76■■□□□ 1.55
LMNA-207ENST00000368301 VWDEQ8N2E2 1590 aa24.76■■□□□ 1.55
LMNA-207ENST00000368301 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
LMNA-207ENST00000368301 ZBED9Q6R2W3 1325 aa24.76■■□□□ 1.55
LMNA-207ENST00000368301 TET3O43151 1660 aa24.76■■□□□ 1.55
LMNA-207ENST00000368301 DISP3Q9P2K9 1392 aa24.75■■□□□ 1.55
LMNA-207ENST00000368301 MROH1Q8NDA8 1641 aa24.75■■□□□ 1.55
LMNA-207ENST00000368301 IRX6P78412 446 aaPredicted RBP24.74■■□□□ 1.55
LMNA-207ENST00000368301 KIDINS220Q9ULH0 1771 aa24.74■■□□□ 1.55
LMNA-207ENST00000368301 KANK1Q14678 1352 aa24.73■■□□□ 1.55
LMNA-207ENST00000368301 CEP152O94986 1710 aa24.72■■□□□ 1.55
LMNA-207ENST00000368301 RNF17Q9BXT8 1623 aaKnown RBP24.72■■□□□ 1.55
LMNA-207ENST00000368301 COL17A1Q9UMD9 1497 aaPredicted RBP24.72■■□□□ 1.55
LMNA-207ENST00000368301 MADDQ8WXG6 1647 aa24.72■■□□□ 1.55
LMNA-207ENST00000368301 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
LMNA-207ENST00000368301 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
LMNA-207ENST00000368301 UGGT1Q9NYU2 1555 aa24.68■■□□□ 1.54
LMNA-207ENST00000368301 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
LMNA-207ENST00000368301 TSHZ2Q9NRE2 1034 aa24.68■■□□□ 1.54
LMNA-207ENST00000368301 ZNF518AQ6AHZ1 1483 aa24.67■■□□□ 1.54
LMNA-207ENST00000368301 TMC1Q8TDI8 760 aa24.67■■□□□ 1.54
LMNA-207ENST00000368301 PER1O15534 1290 aaPredicted RBP24.64■■□□□ 1.54
LMNA-207ENST00000368301 MYBBP1AQ9BQG0 1328 aaKnown RBP24.64■■□□□ 1.53
LMNA-207ENST00000368301 RALBP1Q15311 655 aa24.62■■□□□ 1.53
LMNA-207ENST00000368301 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
LMNA-207ENST00000368301 PPRC1Q5VV67 1664 aaKnown RBP24.61■■□□□ 1.53
LMNA-207ENST00000368301 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
LMNA-207ENST00000368301 TMF1P82094 1093 aa24.6■■□□□ 1.53
LMNA-207ENST00000368301 IQGAP1P46940 1657 aa24.6■■□□□ 1.53
LMNA-207ENST00000368301 PANK3Q9H999 370 aa24.59■■□□□ 1.53
LMNA-207ENST00000368301 BRD4O60885 1362 aaPredicted RBP24.59■■□□□ 1.53
LMNA-207ENST00000368301 PARD3Q8TEW0 1356 aa24.59■■□□□ 1.53
LMNA-207ENST00000368301 KTN1Q86UP2 1357 aaKnown RBP24.58■■□□□ 1.53
LMNA-207ENST00000368301 FRMPD1Q5SYB0 1578 aa24.58■■□□□ 1.53
LMNA-207ENST00000368301 CFAP74Q9C0B2 1584 aa24.56■■□□□ 1.52
LMNA-207ENST00000368301 CC2D1BQ5T0F9 858 aaKnown RBP24.56■■□□□ 1.52
LMNA-207ENST00000368301 LRPPRCP42704 1394 aaKnown RBP24.56■■□□□ 1.52
LMNA-207ENST00000368301 RAPGEF3O95398 923 aa24.54■■□□□ 1.52
LMNA-207ENST00000368301 SCAF11Q99590 1463 aaKnown RBP24.54■■□□□ 1.52
LMNA-207ENST00000368301 MLH3Q9UHC1 1453 aa24.54■■□□□ 1.52
LMNA-207ENST00000368301 ADGRF5Q8IZF2 1346 aa24.53■■□□□ 1.52
LMNA-207ENST00000368301 GGT6Q6P531 493 aa24.53■■□□□ 1.52
LMNA-207ENST00000368301 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
LMNA-207ENST00000368301 MROH2AA6NES4 1674 aa24.52■■□□□ 1.52
LMNA-207ENST00000368301 LMTK2Q8IWU2 1503 aa24.52■■□□□ 1.52
LMNA-207ENST00000368301 ABCA6Q8N139 1617 aa24.51■■□□□ 1.51
LMNA-207ENST00000368301 CFAP70Q5T0N1 1121 aa24.51■■□□□ 1.51
LMNA-207ENST00000368301 NLRP13Q86W25 1043 aa24.51■■□□□ 1.51
LMNA-207ENST00000368301 STAC3Q96MF2 364 aa24.51■■□□□ 1.51
LMNA-207ENST00000368301 CFAP65Q6ZU64 1925 aaKnown RBP24.51■■□□□ 1.51
LMNA-207ENST00000368301 SMG6Q86US8 1419 aaKnown RBP24.5■■□□□ 1.51
LMNA-207ENST00000368301 KIF1BO60333 1816 aa24.5■■□□□ 1.51
LMNA-207ENST00000368301 NEURL4Q96JN8 1562 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms