RNA–Protein interactions for RNA: ENST00000366985.5

ATF3-205, Transcript of activating transcription factor 3, humanhuman

TSL 5

Gene ATF3, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-205ENST00000366985 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
ATF3-205ENST00000366985 SYNMO15061 1565 aa12.54□□□□□ -0.4
ATF3-205ENST00000366985 SYCP2Q9BX26 1530 aa12.53□□□□□ -0.4
ATF3-205ENST00000366985 FAM135AQ9P2D6 1515 aa12.53□□□□□ -0.4
ATF3-205ENST00000366985 TNRQ92752 1358 aa12.53□□□□□ -0.4
ATF3-205ENST00000366985 NPHP4O75161 1426 aaPredicted RBP12.52□□□□□ -0.41
ATF3-205ENST00000366985 PLXNC1O60486 1568 aa12.52□□□□□ -0.41
ATF3-205ENST00000366985 NEURL4Q96JN8 1562 aa12.52□□□□□ -0.41
ATF3-205ENST00000366985 DEPDC5O75140 1603 aa12.51□□□□□ -0.41
ATF3-205ENST00000366985 INO80Q9ULG1 1556 aaPredicted RBP12.51□□□□□ -0.41
ATF3-205ENST00000366985 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
ATF3-205ENST00000366985 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATF3-205ENST00000366985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.5□□□□□ -0.416e-7■□□□□ 11.3
ATF3-205ENST00000366985 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
ATF3-205ENST00000366985 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
ATF3-205ENST00000366985 LRRIQ1Q96JM4 1722 aa12.49□□□□□ -0.41
ATF3-205ENST00000366985 NLRP1Q9C000 1473 aa12.49□□□□□ -0.41
ATF3-205ENST00000366985 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
ATF3-205ENST00000366985 MED14O60244 1454 aa12.47□□□□□ -0.41
ATF3-205ENST00000366985 ARHGAP35Q9NRY4 1499 aa12.47□□□□□ -0.41
ATF3-205ENST00000366985 KIAA1107Q9UPP5 1409 aa12.47□□□□□ -0.41
ATF3-205ENST00000366985 WASHC2CQ9Y4E1 1318 aa12.46□□□□□ -0.41
ATF3-205ENST00000366985 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.41
ATF3-205ENST00000366985 LRRC7Q96NW7 1537 aa12.46□□□□□ -0.42
ATF3-205ENST00000366985 KDM5DQ9BY66 1539 aa12.46□□□□□ -0.42
ATF3-205ENST00000366985 PZPP20742 1482 aa12.46□□□□□ -0.42
ATF3-205ENST00000366985 CCNB3Q8WWL7 1395 aa12.45□□□□□ -0.42
ATF3-205ENST00000366985 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
ATF3-205ENST00000366985 CASKIN1Q8WXD9 1431 aa12.44□□□□□ -0.42
ATF3-205ENST00000366985 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
ATF3-205ENST00000366985 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
ATF3-205ENST00000366985 KIF3BO15066 747 aa12.42□□□□□ -0.42
ATF3-205ENST00000366985 FBXO31Q5XUX0 539 aaPredicted RBP12.42□□□□□ -0.42
ATF3-205ENST00000366985 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
ATF3-205ENST00000366985 DHX29Q7Z478 1369 aaKnown RBP12.41□□□□□ -0.42
ATF3-205ENST00000366985 RTEL1-TNFRSF6BF6WH68 1400 aa12.4□□□□□ -0.42
ATF3-205ENST00000366985 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.43
ATF3-205ENST00000366985 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
ATF3-205ENST00000366985 STRCP1A6NGW2 1772 aa12.39□□□□□ -0.43
ATF3-205ENST00000366985 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
ATF3-205ENST00000366985 EID1Q9Y6B2 187 aa12.39□□□□□ -0.43
ATF3-205ENST00000366985 MEX3CQ5U5Q3 659 aaKnown RBP12.37□□□□□ -0.43
ATF3-205ENST00000366985 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
ATF3-205ENST00000366985 LRRC9Q6ZRR7 1453 aa12.37□□□□□ -0.43
ATF3-205ENST00000366985 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
ATF3-205ENST00000366985 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
ATF3-205ENST00000366985 ZC3H13Q5T200 1668 aaKnown RBP12.35□□□□□ -0.43
ATF3-205ENST00000366985 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
ATF3-205ENST00000366985 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
ATF3-205ENST00000366985 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
ATF3-205ENST00000366985 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
ATF3-205ENST00000366985 SETBP1Q9Y6X0 1596 aa12.33□□□□□ -0.44
ATF3-205ENST00000366985 PHLPP1O60346 1717 aa12.33□□□□□ -0.44
ATF3-205ENST00000366985 JCADQ9P266 1359 aa12.32□□□□□ -0.44
ATF3-205ENST00000366985 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
ATF3-205ENST00000366985 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
ATF3-205ENST00000366985 TSPY4P0CV99 314 aa12.31□□□□□ -0.44
ATF3-205ENST00000366985 TSPY10P0CW01 314 aa12.31□□□□□ -0.44
ATF3-205ENST00000366985 XIRP1Q702N8 1843 aaKnown RBP12.31□□□□□ -0.44
ATF3-205ENST00000366985 CCDC141Q6ZP82 1450 aa12.31□□□□□ -0.44
ATF3-205ENST00000366985 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
ATF3-205ENST00000366985 PROSER2Q86WR7 435 aaPredicted RBP12.3□□□□□ -0.44
ATF3-205ENST00000366985 MSH6P52701 1360 aa12.3□□□□□ -0.44
ATF3-205ENST00000366985 RXRBP28702 533 aa12.28□□□□□ -0.44
ATF3-205ENST00000366985 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
ATF3-205ENST00000366985 TMEM94Q12767 1356 aa12.28□□□□□ -0.44
ATF3-205ENST00000366985 ERVK-7P63135 1459 aa12.27□□□□□ -0.45
ATF3-205ENST00000366985 MBD5Q9P267 1494 aa12.27□□□□□ -0.45
ATF3-205ENST00000366985 SENP3-EIF4A1A0A087X0R7 540 aa12.26□□□□□ -0.45
ATF3-205ENST00000366985 YY1P25490 414 aa12.26□□□□□ -0.45
ATF3-205ENST00000366985 BCANQ96GW7 911 aa12.26□□□□□ -0.45
ATF3-205ENST00000366985 SLIT1O75093 1534 aa12.26□□□□□ -0.45
ATF3-205ENST00000366985 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
ATF3-205ENST00000366985 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
ATF3-205ENST00000366985 KCNA6P17658 529 aa12.25□□□□□ -0.45
ATF3-205ENST00000366985 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
ATF3-205ENST00000366985 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
ATF3-205ENST00000366985 ABCC3O15438 1527 aa12.24□□□□□ -0.45
ATF3-205ENST00000366985 SLAIN2Q9P270 581 aa12.24□□□□□ -0.45
ATF3-205ENST00000366985 EIF2AK4Q9P2K8 1649 aaKnown RBP12.24□□□□□ -0.45
ATF3-205ENST00000366985 NKTRP30414 1462 aaKnown RBP12.23□□□□□ -0.45
ATF3-205ENST00000366985 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
ATF3-205ENST00000366985 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
ATF3-205ENST00000366985 CDK12Q9NYV4 1490 aaPredicted RBP12.22□□□□□ -0.45
ATF3-205ENST00000366985 LTKP29376 864 aa12.22□□□□□ -0.45
ATF3-205ENST00000366985 C14orf37Q86TY3 774 aa12.22□□□□□ -0.45
ATF3-205ENST00000366985 CEP152O94986 1710 aa12.22□□□□□ -0.45
ATF3-205ENST00000366985 CAMSAP2Q08AD1 1489 aa12.21□□□□□ -0.45
ATF3-205ENST00000366985 PRDM15P57071 1507 aaPredicted RBP12.21□□□□□ -0.46
ATF3-205ENST00000366985 ARHGEF5Q12774 1597 aa12.2□□□□□ -0.46
ATF3-205ENST00000366985 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
ATF3-205ENST00000366985 TMEM2Q9UHN6 1383 aa12.19□□□□□ -0.46
ATF3-205ENST00000366985 NUTM2BA6NNL0 878 aaPredicted RBP12.19□□□□□ -0.46
ATF3-205ENST00000366985 NUTM2EB1AL46 878 aaPredicted RBP12.19□□□□□ -0.46
ATF3-205ENST00000366985 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
ATF3-205ENST00000366985 NUTM2AQ8IVF1 878 aaPredicted RBP12.19□□□□□ -0.46
ATF3-205ENST00000366985 NCOA2Q15596 1464 aa12.19□□□□□ -0.46
ATF3-205ENST00000366985 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
ATF3-205ENST00000366985 MAP3K1Q13233 1512 aa12.18□□□□□ -0.46
ATF3-205ENST00000366985 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms