RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
MRPL55-216ENST00000366744 ABCC5O15440 1437 aa14.35□□□□□ -0.11
MRPL55-216ENST00000366744 ERBINQ96RT1 1412 aa14.35□□□□□ -0.11
MRPL55-216ENST00000366744 KIF3BO15066 747 aa14.35□□□□□ -0.11
MRPL55-216ENST00000366744 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
MRPL55-216ENST00000366744 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
MRPL55-216ENST00000366744 ANKRD30AQ9BXX3 1397 aa14.34□□□□□ -0.11
MRPL55-216ENST00000366744 NPATQ14207 1427 aa14.34□□□□□ -0.11
MRPL55-216ENST00000366744 DEPDC5O75140 1603 aa14.33□□□□□ -0.11
MRPL55-216ENST00000366744 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.11
MRPL55-216ENST00000366744 PRDM15P57071 1507 aaPredicted RBP14.33□□□□□ -0.12
MRPL55-216ENST00000366744 CEBPAP49715 358 aaPredicted RBP14.32□□□□□ -0.12
MRPL55-216ENST00000366744 MROH1Q8NDA8 1641 aa14.31□□□□□ -0.12
MRPL55-216ENST00000366744 ZMYM3Q14202 1370 aa14.31□□□□□ -0.12
MRPL55-216ENST00000366744 ADGRL2O95490 1459 aa14.31□□□□□ -0.12
MRPL55-216ENST00000366744 ABCC3O15438 1527 aa14.3□□□□□ -0.12
MRPL55-216ENST00000366744 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-216ENST00000366744 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
MRPL55-216ENST00000366744 PZPP20742 1482 aa14.29□□□□□ -0.12
MRPL55-216ENST00000366744 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
MRPL55-216ENST00000366744 KANK1Q14678 1352 aa14.27□□□□□ -0.12
MRPL55-216ENST00000366744 POLR1AO95602 1720 aaPredicted RBP14.27□□□□□ -0.13
MRPL55-216ENST00000366744 PTPRKQ15262 1439 aa14.26□□□□□ -0.13
MRPL55-216ENST00000366744 RRP7BPQ9NSQ0 103 aa14.26□□□□□ -0.13
MRPL55-216ENST00000366744 CHIC2Q9UKJ5 165 aa14.26□□□□□ -0.13
MRPL55-216ENST00000366744 HSPA2P54652 639 aa14.25□□□□□ -0.13
MRPL55-216ENST00000366744 PPARGC1BQ86YN6 1023 aaKnown RBP14.25□□□□□ -0.13
MRPL55-216ENST00000366744 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
MRPL55-216ENST00000366744 STRCQ7RTU9 1775 aa14.24□□□□□ -0.13
MRPL55-216ENST00000366744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.23□□□□□ -0.13
MRPL55-216ENST00000366744 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
MRPL55-216ENST00000366744 TNRQ92752 1358 aa14.22□□□□□ -0.13
MRPL55-216ENST00000366744 UNC13BO14795 1591 aa14.22□□□□□ -0.13
MRPL55-216ENST00000366744 ANKRD50Q9ULJ7 1429 aa14.22□□□□□ -0.13
MRPL55-216ENST00000366744 SPATA31D1Q6ZQQ2 1576 aa14.22□□□□□ -0.13
MRPL55-216ENST00000366744 A2ML1A8K2U0 1454 aa14.21□□□□□ -0.13
MRPL55-216ENST00000366744 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
MRPL55-216ENST00000366744 ROCK1Q13464 1354 aa14.21□□□□□ -0.14
MRPL55-216ENST00000366744 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
MRPL55-216ENST00000366744 TET3O43151 1660 aa14.2□□□□□ -0.14
MRPL55-216ENST00000366744 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
MRPL55-216ENST00000366744 ERVK-7P63135 1459 aa14.19□□□□□ -0.14
MRPL55-216ENST00000366744 ITGAEP38570 1179 aa14.19□□□□□ -0.14
MRPL55-216ENST00000366744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
MRPL55-216ENST00000366744 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
MRPL55-216ENST00000366744 VWDEQ8N2E2 1590 aa14.18□□□□□ -0.14
MRPL55-216ENST00000366744 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
MRPL55-216ENST00000366744 LMTK2Q8IWU2 1503 aa14.18□□□□□ -0.14
MRPL55-216ENST00000366744 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
MRPL55-216ENST00000366744 IQGAP3Q86VI3 1631 aa14.17□□□□□ -0.14
MRPL55-216ENST00000366744 ARHGAP31Q2M1Z3 1444 aa14.16□□□□□ -0.14
MRPL55-216ENST00000366744 UBR1Q8IWV7 1749 aa14.16□□□□□ -0.14
MRPL55-216ENST00000366744 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
MRPL55-216ENST00000366744 RPRD2Q5VT52 1461 aaKnown RBP14.13□□□□□ -0.15
MRPL55-216ENST00000366744 FBXO31Q5XUX0 539 aaPredicted RBP14.13□□□□□ -0.15
MRPL55-216ENST00000366744 PTPRTO14522 1441 aa14.13□□□□□ -0.15
MRPL55-216ENST00000366744 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
MRPL55-216ENST00000366744 E9PCH4 1651 aa14.11□□□□□ -0.15
MRPL55-216ENST00000366744 IQGAP1P46940 1657 aa14.11□□□□□ -0.15
MRPL55-216ENST00000366744 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
MRPL55-216ENST00000366744 SYNMO15061 1565 aa14.09□□□□□ -0.15
MRPL55-216ENST00000366744 PKD2Q13563 968 aa14.09□□□□□ -0.15
MRPL55-216ENST00000366744 NEURL4Q96JN8 1562 aa14.09□□□□□ -0.15
MRPL55-216ENST00000366744 ADGRB3O60242 1522 aa14.08□□□□□ -0.16
MRPL55-216ENST00000366744 MYO5BQ9ULV0 1848 aa14.08□□□□□ -0.16
MRPL55-216ENST00000366744 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
MRPL55-216ENST00000366744 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
MRPL55-216ENST00000366744 HFM1A2PYH4 1435 aa14.06□□□□□ -0.16
MRPL55-216ENST00000366744 NUP155O75694 1391 aa14.05□□□□□ -0.16
MRPL55-216ENST00000366744 NCKAP5LQ9HCH0 1330 aa14.04□□□□□ -0.16
MRPL55-216ENST00000366744 NAIPQ13075 1403 aa14.04□□□□□ -0.16
MRPL55-216ENST00000366744 ANKLE2Q86XL3 938 aa14.03□□□□□ -0.16
MRPL55-216ENST00000366744 NOS1P29475 1434 aa14.03□□□□□ -0.16
MRPL55-216ENST00000366744 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
MRPL55-216ENST00000366744 SLIT1O75093 1534 aa14.03□□□□□ -0.16
MRPL55-216ENST00000366744 NPHP4O75161 1426 aaPredicted RBP14.02□□□□□ -0.16
MRPL55-216ENST00000366744 KIF1BO60333 1816 aa14.01□□□□□ -0.17
MRPL55-216ENST00000366744 MED14O60244 1454 aa14□□□□□ -0.17
MRPL55-216ENST00000366744 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
MRPL55-216ENST00000366744 EID1Q9Y6B2 187 aa13.99□□□□□ -0.17
MRPL55-216ENST00000366744 TMEM131LA2VDJ0 1609 aa13.99□□□□□ -0.17
MRPL55-216ENST00000366744 LTBP4Q8N2S1 1624 aa13.99□□□□□ -0.17
MRPL55-216ENST00000366744 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
MRPL55-216ENST00000366744 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
MRPL55-216ENST00000366744 SLC52A1Q9NWF4 448 aa13.98□□□□□ -0.17
MRPL55-216ENST00000366744 CPS1P31327 1500 aa13.98□□□□□ -0.17
MRPL55-216ENST00000366744 TRPM2O94759 1503 aa13.96□□□□□ -0.17
MRPL55-216ENST00000366744 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
MRPL55-216ENST00000366744 TMEM2Q9UHN6 1383 aa13.96□□□□□ -0.18
MRPL55-216ENST00000366744 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
MRPL55-216ENST00000366744 ZNF335Q9H4Z2 1342 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-216ENST00000366744 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
MRPL55-216ENST00000366744 CLTCL1P53675 1640 aa13.93□□□□□ -0.18
MRPL55-216ENST00000366744 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
MRPL55-216ENST00000366744 IDI1Q13907 227 aa13.93□□□□□ -0.18
MRPL55-216ENST00000366744 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
MRPL55-216ENST00000366744 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-216ENST00000366744 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
MRPL55-216ENST00000366744 STRCP1A6NGW2 1772 aa13.91□□□□□ -0.18
MRPL55-216ENST00000366744 HDGFP51858 240 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms