RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
TRIM11-202ENST00000366699 ERBINQ96RT1 1412 aa23.96■■□□□ 1.43
TRIM11-202ENST00000366699 CCDC184Q52MB2 194 aa23.95■■□□□ 1.43
TRIM11-202ENST00000366699 MRS2Q9HD23 443 aa23.95■■□□□ 1.42
TRIM11-202ENST00000366699 KDM2AQ9Y2K7 1162 aa23.94■■□□□ 1.42
TRIM11-202ENST00000366699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.92■■□□□ 1.42
TRIM11-202ENST00000366699 BCORL1Q5H9F3 1711 aa23.92■■□□□ 1.42
TRIM11-202ENST00000366699 IQGAP3Q86VI3 1631 aa23.9■■□□□ 1.42
TRIM11-202ENST00000366699 ABCC1P33527 1531 aa23.9■■□□□ 1.42
TRIM11-202ENST00000366699 ARAP3Q8WWN8 1544 aa23.9■■□□□ 1.42
TRIM11-202ENST00000366699 FAM9BQ8IZU0 186 aa23.89■■□□□ 1.42
TRIM11-202ENST00000366699 MAGI2Q86UL8 1455 aa23.88■■□□□ 1.41
TRIM11-202ENST00000366699 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
TRIM11-202ENST00000366699 ZBED9Q6R2W3 1325 aa23.87■■□□□ 1.41
TRIM11-202ENST00000366699 ERICH6BQ5W0A0 696 aa23.86■■□□□ 1.41
TRIM11-202ENST00000366699 DHX29Q7Z478 1369 aaKnown RBP23.86■■□□□ 1.41
TRIM11-202ENST00000366699 RTEL1-TNFRSF6BF6WH68 1400 aa23.85■■□□□ 1.41
TRIM11-202ENST00000366699 ATP10AO60312 1499 aa23.85■■□□□ 1.41
TRIM11-202ENST00000366699 PRAG1Q86YV5 1406 aa23.84■■□□□ 1.41
TRIM11-202ENST00000366699 PLA2R1Q13018 1463 aa23.84■■□□□ 1.41
TRIM11-202ENST00000366699 SPAG9O60271 1321 aaKnown RBP23.83■■□□□ 1.41
TRIM11-202ENST00000366699 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
TRIM11-202ENST00000366699 TRAPPC8Q9Y2L5 1435 aa23.83■■□□□ 1.4
TRIM11-202ENST00000366699 WDR7Q9Y4E6 1490 aa23.82■■□□□ 1.4
TRIM11-202ENST00000366699 RGL3Q3MIN7 710 aa23.79■■□□□ 1.4
TRIM11-202ENST00000366699 GPRASP1Q5JY77 1395 aa23.77■■□□□ 1.4
TRIM11-202ENST00000366699 A2MP01023 1474 aa23.76■■□□□ 1.39
TRIM11-202ENST00000366699 KTN1Q86UP2 1357 aaKnown RBP23.76■■□□□ 1.39
TRIM11-202ENST00000366699 TRPM1Q7Z4N2 1603 aa23.76■■□□□ 1.39
TRIM11-202ENST00000366699 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
TRIM11-202ENST00000366699 IRX6P78412 446 aaPredicted RBP23.73■■□□□ 1.39
TRIM11-202ENST00000366699 AFAP1Q8N556 730 aa23.73■■□□□ 1.39
TRIM11-202ENST00000366699 ZFYVE16Q7Z3T8 1539 aa23.73■■□□□ 1.39
TRIM11-202ENST00000366699 FANCAO15360 1455 aa23.72■■□□□ 1.39
TRIM11-202ENST00000366699 RBM19Q9Y4C8 960 aaKnown RBP23.72■■□□□ 1.39
TRIM11-202ENST00000366699 LAMC1P11047 1609 aa23.71■■□□□ 1.39
TRIM11-202ENST00000366699 PPP4R2Q9NY27 417 aa23.7■■□□□ 1.38
TRIM11-202ENST00000366699 RALBP1Q15311 655 aa23.69■■□□□ 1.38
TRIM11-202ENST00000366699 ABCA9Q8IUA7 1624 aa23.69■■□□□ 1.38
TRIM11-202ENST00000366699 STAC3Q96MF2 364 aa23.69■■□□□ 1.38
TRIM11-202ENST00000366699 KANK1Q14678 1352 aa23.68■■□□□ 1.38
TRIM11-202ENST00000366699 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
TRIM11-202ENST00000366699 OSCARQ8IYS5 282 aa23.67■■□□□ 1.38
TRIM11-202ENST00000366699 TMC1Q8TDI8 760 aa23.66■■□□□ 1.38
TRIM11-202ENST00000366699 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
TRIM11-202ENST00000366699 ATP7AQ04656 1500 aa23.65■■□□□ 1.38
TRIM11-202ENST00000366699 E9PCH4 1651 aa23.65■■□□□ 1.38
TRIM11-202ENST00000366699 ADGRL1O94910 1474 aa23.64■■□□□ 1.38
TRIM11-202ENST00000366699 ASXL2Q76L83 1435 aa23.64■■□□□ 1.38
TRIM11-202ENST00000366699 CNGB1Q14028 1251 aaPredicted RBP23.64■■□□□ 1.38
TRIM11-202ENST00000366699 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.37
TRIM11-202ENST00000366699 MYBBP1AQ9BQG0 1328 aaKnown RBP23.63■■□□□ 1.37
TRIM11-202ENST00000366699 SCAPERQ9BY12 1400 aa23.63■■□□□ 1.37
TRIM11-202ENST00000366699 NPM1P06748 294 aaKnown RBP eCLIP23.63■■□□□ 1.37
TRIM11-202ENST00000366699 TRPM2O94759 1503 aa23.62■■□□□ 1.37
TRIM11-202ENST00000366699 INO80Q9ULG1 1556 aaPredicted RBP23.62■■□□□ 1.37
TRIM11-202ENST00000366699 MYT1LQ9UL68 1186 aa23.62■■□□□ 1.37
TRIM11-202ENST00000366699 BRD4O60885 1362 aaPredicted RBP23.62■■□□□ 1.37
TRIM11-202ENST00000366699 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
TRIM11-202ENST00000366699 PTPRTO14522 1441 aa23.62■■□□□ 1.37
TRIM11-202ENST00000366699 PNISRQ8TF01 805 aaKnown RBP23.61■■□□□ 1.37
TRIM11-202ENST00000366699 COL17A1Q9UMD9 1497 aaPredicted RBP23.59■■□□□ 1.37
TRIM11-202ENST00000366699 TMF1P82094 1093 aa23.59■■□□□ 1.37
TRIM11-202ENST00000366699 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
TRIM11-202ENST00000366699 ANP32EQ9BTT0 268 aa23.58■■□□□ 1.36
TRIM11-202ENST00000366699 TESK2Q96S53 571 aa23.57■■□□□ 1.36
TRIM11-202ENST00000366699 TET3O43151 1660 aa23.57■■□□□ 1.36
TRIM11-202ENST00000366699 NUDCQ9Y266 331 aa23.57■■□□□ 1.36
TRIM11-202ENST00000366699 KIF3BO15066 747 aa23.56■■□□□ 1.36
TRIM11-202ENST00000366699 VWDEQ8N2E2 1590 aa23.55■■□□□ 1.36
TRIM11-202ENST00000366699 RNF17Q9BXT8 1623 aaKnown RBP23.53■■□□□ 1.36
TRIM11-202ENST00000366699 LRPPRCP42704 1394 aaKnown RBP23.53■■□□□ 1.36
TRIM11-202ENST00000366699 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
TRIM11-202ENST00000366699 NLRP13Q86W25 1043 aa23.52■■□□□ 1.36
TRIM11-202ENST00000366699 PARD3Q8TEW0 1356 aa23.51■■□□□ 1.35
TRIM11-202ENST00000366699 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
TRIM11-202ENST00000366699 ZNF518AQ6AHZ1 1483 aa23.51■■□□□ 1.35
TRIM11-202ENST00000366699 CEP152O94986 1710 aa23.5■■□□□ 1.35
TRIM11-202ENST00000366699 PER1O15534 1290 aaPredicted RBP23.5■■□□□ 1.35
TRIM11-202ENST00000366699 NEURL4Q96JN8 1562 aa23.5■■□□□ 1.35
TRIM11-202ENST00000366699 MADDQ8WXG6 1647 aa23.49■■□□□ 1.35
TRIM11-202ENST00000366699 RNF123Q5XPI4 1314 aa23.49■■□□□ 1.35
TRIM11-202ENST00000366699 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
TRIM11-202ENST00000366699 CLTCL1P53675 1640 aa23.47■■□□□ 1.35
TRIM11-202ENST00000366699 B4GALNT3Q6L9W6 998 aa23.46■■□□□ 1.35
TRIM11-202ENST00000366699 CFAP74Q9C0B2 1584 aa23.46■■□□□ 1.35
TRIM11-202ENST00000366699 SCAF11Q99590 1463 aaKnown RBP23.45■■□□□ 1.34
TRIM11-202ENST00000366699 PANK3Q9H999 370 aa23.44■■□□□ 1.34
TRIM11-202ENST00000366699 FANCIQ9NVI1 1328 aa23.44■■□□□ 1.34
TRIM11-202ENST00000366699 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
TRIM11-202ENST00000366699 CD109Q6YHK3 1445 aa23.44■■□□□ 1.34
TRIM11-202ENST00000366699 SLC24A1O60721 1099 aa23.43■■□□□ 1.34
TRIM11-202ENST00000366699 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
TRIM11-202ENST00000366699 LMTK2Q8IWU2 1503 aa23.41■■□□□ 1.34
TRIM11-202ENST00000366699 KIDINS220Q9ULH0 1771 aa23.4■■□□□ 1.34
TRIM11-202ENST00000366699 EFCAB6Q5THR3 1501 aa23.4■■□□□ 1.34
TRIM11-202ENST00000366699 IQGAP1P46940 1657 aa23.4■■□□□ 1.34
TRIM11-202ENST00000366699 POGZQ7Z3K3 1410 aa23.39■■□□□ 1.33
TRIM11-202ENST00000366699 INSRP06213 1382 aa23.38■■□□□ 1.33
TRIM11-202ENST00000366699 MYOM2P54296 1465 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms