RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ZFYVE16Q7Z3T8 1539 aa14.59□□□□□ -0.07
SMC3-201ENST00000361804 CDK11AQ9UQ88 783 aaPredicted RBP14.58□□□□□ -0.08
SMC3-201ENST00000361804 KIF7Q2M1P5 1343 aa14.58□□□□□ -0.08
SMC3-201ENST00000361804 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
SMC3-201ENST00000361804 RNF17Q9BXT8 1623 aaKnown RBP14.56□□□□□ -0.08
SMC3-201ENST00000361804 TRAPPC8Q9Y2L5 1435 aa14.56□□□□□ -0.08
SMC3-201ENST00000361804 VWDEQ8N2E2 1590 aa14.56□□□□□ -0.08
SMC3-201ENST00000361804 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
SMC3-201ENST00000361804 KIF15Q9NS87 1388 aa14.55□□□□□ -0.08
SMC3-201ENST00000361804 BCL11AQ9H165 835 aa14.55□□□□□ -0.08
SMC3-201ENST00000361804 DHX29Q7Z478 1369 aaKnown RBP14.55□□□□□ -0.08
SMC3-201ENST00000361804 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
SMC3-201ENST00000361804 PLCH2O75038 1416 aa14.54□□□□□ -0.08
SMC3-201ENST00000361804 ANKRD30AQ9BXX3 1397 aa14.54□□□□□ -0.08
SMC3-201ENST00000361804 RALGAPBQ86X10 1494 aa14.53□□□□□ -0.08
SMC3-201ENST00000361804 KIDINS220Q9ULH0 1771 aa14.53□□□□□ -0.08
SMC3-201ENST00000361804 ARAP3Q8WWN8 1544 aa14.53□□□□□ -0.08
SMC3-201ENST00000361804 CEP152O94986 1710 aa14.52□□□□□ -0.09
SMC3-201ENST00000361804 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
SMC3-201ENST00000361804 IFT172Q9UG01 1749 aa14.51□□□□□ -0.09
SMC3-201ENST00000361804 ATP10AO60312 1499 aa14.51□□□□□ -0.09
SMC3-201ENST00000361804 A2MP01023 1474 aa14.51□□□□□ -0.09
SMC3-201ENST00000361804 PPP4R2Q9NY27 417 aa14.5□□□□□ -0.09
SMC3-201ENST00000361804 LAMC1P11047 1609 aa14.5□□□□□ -0.09
SMC3-201ENST00000361804 PKD2Q13563 968 aa14.5□□□□□ -0.09
SMC3-201ENST00000361804 SPHKAPQ2M3C7 1700 aa14.49□□□□□ -0.09
SMC3-201ENST00000361804 CLTCL1P53675 1640 aa14.48□□□□□ -0.09
SMC3-201ENST00000361804 MROH2AA6NES4 1674 aa14.48□□□□□ -0.09
SMC3-201ENST00000361804 FRMPD1Q5SYB0 1578 aa14.48□□□□□ -0.09
SMC3-201ENST00000361804 DUOX2Q9NRD8 1548 aa14.47□□□□□ -0.09
SMC3-201ENST00000361804 MADDQ8WXG6 1647 aa14.47□□□□□ -0.09
SMC3-201ENST00000361804 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
SMC3-201ENST00000361804 ZBED9Q6R2W3 1325 aa14.46□□□□□ -0.09
SMC3-201ENST00000361804 PRDM15P57071 1507 aaPredicted RBP14.46□□□□□ -0.09
SMC3-201ENST00000361804 IQGAP1P46940 1657 aa14.46□□□□□ -0.09
SMC3-201ENST00000361804 NUP155O75694 1391 aa14.46□□□□□ -0.09
SMC3-201ENST00000361804 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.1
SMC3-201ENST00000361804 SALL2Q9Y467 1007 aaPredicted RBP14.46□□□□□ -0.1
SMC3-201ENST00000361804 SIGLEC1Q9BZZ2 1709 aa14.45□□□□□ -0.1
SMC3-201ENST00000361804 PRAG1Q86YV5 1406 aa14.44□□□□□ -0.1
SMC3-201ENST00000361804 MYOM1P52179 1685 aa14.44□□□□□ -0.1
SMC3-201ENST00000361804 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
SMC3-201ENST00000361804 FANCIQ9NVI1 1328 aa14.43□□□□□ -0.1
SMC3-201ENST00000361804 ERBINQ96RT1 1412 aa14.43□□□□□ -0.1
SMC3-201ENST00000361804 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
SMC3-201ENST00000361804 USP47Q96K76 1375 aa14.41□□□□□ -0.1
SMC3-201ENST00000361804 TET3O43151 1660 aa14.41□□□□□ -0.1
SMC3-201ENST00000361804 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
SMC3-201ENST00000361804 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
SMC3-201ENST00000361804 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
SMC3-201ENST00000361804 TRPM2O94759 1503 aa14.39□□□□□ -0.11
SMC3-201ENST00000361804 ATP7AQ04656 1500 aa14.39□□□□□ -0.11
SMC3-201ENST00000361804 NBR1Q14596 966 aa14.38□□□□□ -0.11
SMC3-201ENST00000361804 GPRASP1Q5JY77 1395 aa14.38□□□□□ -0.11
SMC3-201ENST00000361804 PTPRTO14522 1441 aa14.37□□□□□ -0.11
SMC3-201ENST00000361804 ABCA6Q8N139 1617 aa14.36□□□□□ -0.11
SMC3-201ENST00000361804 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
SMC3-201ENST00000361804 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
SMC3-201ENST00000361804 ST20-MTHFSA0A0A6YYL1 179 aa14.35□□□□□ -0.11
SMC3-201ENST00000361804 RTEL1-TNFRSF6BF6WH68 1400 aa14.34□□□□□ -0.11
SMC3-201ENST00000361804 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
SMC3-201ENST00000361804 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
SMC3-201ENST00000361804 RICTORQ6R327 1708 aa14.34□□□□□ -0.11
SMC3-201ENST00000361804 FANCAO15360 1455 aa14.34□□□□□ -0.11
SMC3-201ENST00000361804 NUDCQ9Y266 331 aa14.34□□□□□ -0.11
SMC3-201ENST00000361804 AFAP1Q8N556 730 aa14.33□□□□□ -0.12
SMC3-201ENST00000361804 NEURL4Q96JN8 1562 aa14.33□□□□□ -0.12
SMC3-201ENST00000361804 NBPF1Q3BBV0 1214 aa14.33□□□□□ -0.12
SMC3-201ENST00000361804 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.12
SMC3-201ENST00000361804 PNISRQ8TF01 805 aaKnown RBP14.32□□□□□ -0.12
SMC3-201ENST00000361804 ZC3H13Q5T200 1668 aaKnown RBP14.32□□□□□ -0.12
SMC3-201ENST00000361804 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
SMC3-201ENST00000361804 ERICH6BQ5W0A0 696 aa14.31□□□□□ -0.12
SMC3-201ENST00000361804 RGL3Q3MIN7 710 aa14.31□□□□□ -0.12
SMC3-201ENST00000361804 EFCAB6Q5THR3 1501 aa14.31□□□□□ -0.12
SMC3-201ENST00000361804 TESK2Q96S53 571 aa14.3□□□□□ -0.12
SMC3-201ENST00000361804 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
SMC3-201ENST00000361804 KIAA1210Q9ULL0 1709 aa14.3□□□□□ -0.12
SMC3-201ENST00000361804 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
SMC3-201ENST00000361804 COL17A1Q9UMD9 1497 aaPredicted RBP14.29□□□□□ -0.12
SMC3-201ENST00000361804 DISP3Q9P2K9 1392 aa14.29□□□□□ -0.12
SMC3-201ENST00000361804 PPLO60437 1756 aa14.29□□□□□ -0.12
SMC3-201ENST00000361804 PIK3C2BO00750 1634 aa14.28□□□□□ -0.12
SMC3-201ENST00000361804 TSPY4P0CV99 314 aa14.27□□□□□ -0.12
SMC3-201ENST00000361804 TSPY10P0CW01 314 aa14.27□□□□□ -0.12
SMC3-201ENST00000361804 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.12
SMC3-201ENST00000361804 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.13
SMC3-201ENST00000361804 ZNF518AQ6AHZ1 1483 aa14.27□□□□□ -0.13
SMC3-201ENST00000361804 LMTK2Q8IWU2 1503 aa14.27□□□□□ -0.13
SMC3-201ENST00000361804 MYO5BQ9ULV0 1848 aa14.27□□□□□ -0.13
SMC3-201ENST00000361804 NRXN1Q9ULB1 1477 aa14.26□□□□□ -0.13
SMC3-201ENST00000361804 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
SMC3-201ENST00000361804 NOP58Q9Y2X3 529 aaKnown RBP14.26□□□□□ -0.13
SMC3-201ENST00000361804 PER1O15534 1290 aaPredicted RBP14.26□□□□□ -0.13
SMC3-201ENST00000361804 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
SMC3-201ENST00000361804 MYO3AQ8NEV4 1616 aa14.25□□□□□ -0.13
SMC3-201ENST00000361804 HECW2Q9P2P5 1572 aa14.25□□□□□ -0.13
SMC3-201ENST00000361804 CFAP65Q6ZU64 1925 aaKnown RBP14.25□□□□□ -0.13
SMC3-201ENST00000361804 DEKP35659 375 aaKnown RBP14.25□□□□□ -0.13
SMC3-201ENST00000361804 CDCA7LQ96GN5 454 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms