RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 PTPN23Q9H3S7 1636 aa8.55□□□□□ -1.04
CX3CR1-201ENST00000358309 NCOA1Q15788 1441 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 PANK3Q9H999 370 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 CABP2Q9NPB3 220 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 ADGRF5Q8IZF2 1346 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 WAPLQ7Z5K2 1190 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 POGKQ9P215 609 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 NUP160Q12769 1436 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 ASXL2Q76L83 1435 aa8.54□□□□□ -1.04
CX3CR1-201ENST00000358309 HFM1A2PYH4 1435 aa8.53□□□□□ -1.04
CX3CR1-201ENST00000358309 NEFLP07196 543 aa8.53□□□□□ -1.04
CX3CR1-201ENST00000358309 XPCQ01831 940 aaPredicted RBP8.52□□□□□ -1.05
CX3CR1-201ENST00000358309 UGGT2Q9NYU1 1516 aa8.52□□□□□ -1.05
CX3CR1-201ENST00000358309 SKAP1Q86WV1 359 aa8.52□□□□□ -1.05
CX3CR1-201ENST00000358309 SLC12A5Q9H2X9 1139 aa8.52□□□□□ -1.05
CX3CR1-201ENST00000358309 USP47Q96K76 1375 aa8.52□□□□□ -1.05
CX3CR1-201ENST00000358309 CD109Q6YHK3 1445 aa8.52□□□□□ -1.05
CX3CR1-201ENST00000358309 SYCP2Q9BX26 1530 aa8.51□□□□□ -1.05
CX3CR1-201ENST00000358309 TXNDC2Q86VQ3 553 aa8.51□□□□□ -1.05
CX3CR1-201ENST00000358309 CCDC144AA2RUR9 1427 aa8.51□□□□□ -1.05
CX3CR1-201ENST00000358309 HECW1Q76N89 1606 aa8.51□□□□□ -1.05
CX3CR1-201ENST00000358309 IDI1Q13907 227 aa8.51□□□□□ -1.05
CX3CR1-201ENST00000358309 CHD1O14646 1710 aa8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 PLIN1O60240 522 aa8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 MIA2Q96PC5 1412 aa8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 EHBP1L1Q8N3D4 1523 aa8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 TCERG1O14776 1098 aaKnown RBP8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 B4GALNT3Q6L9W6 998 aa8.5□□□□□ -1.05
CX3CR1-201ENST00000358309 A0A0G2JS52 829 aa8.49□□□□□ -1.05
CX3CR1-201ENST00000358309 ANKRD30BQ9BXX2 1392 aa8.49□□□□□ -1.05
CX3CR1-201ENST00000358309 SUPT6HQ7KZ85 1726 aaKnown RBP8.49□□□□□ -1.05
CX3CR1-201ENST00000358309 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
CX3CR1-201ENST00000358309 LAS1LQ9Y4W2 734 aaKnown RBP8.49□□□□□ -1.05
CX3CR1-201ENST00000358309 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
CX3CR1-201ENST00000358309 PAK3O75914 559 aaPredicted RBP8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 LTV1Q96GA3 475 aaPredicted RBP8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 FANCAO15360 1455 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 BCL2L13Q9BXK5 485 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 ARHGEF12Q9NZN5 1544 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 HSPA2P54652 639 aa8.47□□□□□ -1.05
CX3CR1-201ENST00000358309 ADGRL1O94910 1474 aa8.46□□□□□ -1.05
CX3CR1-201ENST00000358309 PRKRIP1Q9H875 184 aaPredicted RBP8.46□□□□□ -1.05
CX3CR1-201ENST00000358309 ELL2O00472 640 aaPredicted RBP8.45□□□□□ -1.06
CX3CR1-201ENST00000358309 ZRANB1Q9UGI0 708 aa8.45□□□□□ -1.06
CX3CR1-201ENST00000358309 UTRNP46939 3433 aa8.44□□□□□ -1.06
CX3CR1-201ENST00000358309 YEATS2Q9ULM3 1422 aa8.44□□□□□ -1.06
CX3CR1-201ENST00000358309 AKNAQ7Z591 1439 aa8.44□□□□□ -1.06
CX3CR1-201ENST00000358309 UGGT1Q9NYU2 1555 aa8.44□□□□□ -1.06
CX3CR1-201ENST00000358309 PRAM1Q96QH2 718 aa8.44□□□□□ -1.06
CX3CR1-201ENST00000358309 KANK1Q14678 1352 aa8.43□□□□□ -1.06
CX3CR1-201ENST00000358309 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
CX3CR1-201ENST00000358309 DENND4BO75064 1496 aaPredicted RBP8.42□□□□□ -1.06
CX3CR1-201ENST00000358309 SHROOM2Q13796 1616 aa8.42□□□□□ -1.06
CX3CR1-201ENST00000358309 TMF1P82094 1093 aa8.42□□□□□ -1.06
CX3CR1-201ENST00000358309 NPM2Q86SE8 214 aaKnown RBP8.42□□□□□ -1.06
CX3CR1-201ENST00000358309 TTC37Q6PGP7 1564 aa8.42□□□□□ -1.06
CX3CR1-201ENST00000358309 CCDC7Q96M83 1385 aa8.42□□□□□ -1.06
CX3CR1-201ENST00000358309 KIAA1107Q9UPP5 1409 aa8.41□□□□□ -1.06
CX3CR1-201ENST00000358309 TSPOAP1O95153 1857 aa8.41□□□□□ -1.06
CX3CR1-201ENST00000358309 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 HMOX1P09601 288 aa8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 FRAT1Q92837 279 aaPredicted RBP8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 DISP3Q9P2K9 1392 aa8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 CCDC141Q6ZP82 1450 aa8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.4□□□□□ -1.06
CX3CR1-201ENST00000358309 CLUAP1Q96AJ1 413 aa8.4□□□□□ -1.07
CX3CR1-201ENST00000358309 ADCY10Q96PN6 1610 aa8.39□□□□□ -1.07
CX3CR1-201ENST00000358309 ABCC2Q92887 1545 aa8.39□□□□□ -1.07
CX3CR1-201ENST00000358309 PZPP20742 1482 aa8.39□□□□□ -1.07
CX3CR1-201ENST00000358309 PLCH2O75038 1416 aa8.39□□□□□ -1.07
CX3CR1-201ENST00000358309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.39□□□□□ -1.07
CX3CR1-201ENST00000358309 MORC1Q86VD1 984 aa8.39□□□□□ -1.07
CX3CR1-201ENST00000358309 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 RRS1Q15050 365 aaKnown RBP8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 U2AF1L5P0DN76 240 aaPredicted RBP8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 U2AF1Q01081 240 aaKnown RBP eCLIP8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 WDR7Q9Y4E6 1490 aa8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 ERBINQ96RT1 1412 aa8.38□□□□□ -1.07
CX3CR1-201ENST00000358309 THUMPD2Q9BTF0 503 aaKnown RBP8.37□□□□□ -1.07
CX3CR1-201ENST00000358309 APAF1O14727 1248 aa8.37□□□□□ -1.07
CX3CR1-201ENST00000358309 NECTIN2Q92692 538 aa8.37□□□□□ -1.07
CX3CR1-201ENST00000358309 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
CX3CR1-201ENST00000358309 ABCC10Q5T3U5 1492 aa8.36□□□□□ -1.07
CX3CR1-201ENST00000358309 NOS1P29475 1434 aa8.36□□□□□ -1.07
CX3CR1-201ENST00000358309 USP35Q9P2H5 1018 aa8.35□□□□□ -1.07
CX3CR1-201ENST00000358309 ABCA8O94911 1581 aa8.35□□□□□ -1.07
CX3CR1-201ENST00000358309 A2MP01023 1474 aa8.34□□□□□ -1.07
CX3CR1-201ENST00000358309 TCOF1Q13428 1488 aaKnown RBP8.34□□□□□ -1.07
CX3CR1-201ENST00000358309 SAMD9LQ8IVG5 1584 aa8.33□□□□□ -1.08
CX3CR1-201ENST00000358309 CLASP1Q7Z460 1538 aa8.33□□□□□ -1.08
CX3CR1-201ENST00000358309 GCC2Q8IWJ2 1684 aa8.33□□□□□ -1.08
CX3CR1-201ENST00000358309 MTHFSP49914 203 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms