RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 FAM135AQ9P2D6 1515 aa31.23■■■□□ 2.59
HCFC1R1-202ENST00000354679 NPATQ14207 1427 aa31.23■■■□□ 2.59
HCFC1R1-202ENST00000354679 PPARGC1BQ86YN6 1023 aaKnown RBP31.22■■■□□ 2.59
HCFC1R1-202ENST00000354679 EIF2AK4Q9P2K8 1649 aaKnown RBP31.22■■■□□ 2.59
HCFC1R1-202ENST00000354679 KDM5DQ9BY66 1539 aa31.21■■■□□ 2.59
HCFC1R1-202ENST00000354679 RNF17Q9BXT8 1623 aaKnown RBP31.2■■■□□ 2.58
HCFC1R1-202ENST00000354679 RRP7BPQ9NSQ0 103 aa31.19■■■□□ 2.58
HCFC1R1-202ENST00000354679 CHIC2Q9UKJ5 165 aa31.19■■■□□ 2.58
HCFC1R1-202ENST00000354679 PTPRKQ15262 1439 aa31.17■■■□□ 2.58
HCFC1R1-202ENST00000354679 WASHC2CQ9Y4E1 1318 aa31.17■■■□□ 2.58
HCFC1R1-202ENST00000354679 ANKRD30AQ9BXX3 1397 aa31.17■■■□□ 2.58
HCFC1R1-202ENST00000354679 ERBINQ96RT1 1412 aa31.15■■■□□ 2.58
HCFC1R1-202ENST00000354679 ADGRL2O95490 1459 aa31.11■■■□□ 2.57
HCFC1R1-202ENST00000354679 NCOA1Q15788 1441 aa31.11■■■□□ 2.57
HCFC1R1-202ENST00000354679 MROH1Q8NDA8 1641 aa31.1■■■□□ 2.57
HCFC1R1-202ENST00000354679 PZPP20742 1482 aa31.08■■■□□ 2.57
HCFC1R1-202ENST00000354679 ABCC3O15438 1527 aa31.08■■■□□ 2.57
HCFC1R1-202ENST00000354679 ZC3H13Q5T200 1668 aaKnown RBP31.07■■■□□ 2.56
HCFC1R1-202ENST00000354679 MYO3AQ8NEV4 1616 aa31.06■■■□□ 2.56
HCFC1R1-202ENST00000354679 FBXO31Q5XUX0 539 aaPredicted RBP31.03■■■□□ 2.56
HCFC1R1-202ENST00000354679 PRDM15P57071 1507 aaPredicted RBP31.03■■■□□ 2.56
HCFC1R1-202ENST00000354679 ZNF142P52746 1687 aaPredicted RBP31■■■□□ 2.55
HCFC1R1-202ENST00000354679 TNRQ92752 1358 aa31■■■□□ 2.55
HCFC1R1-202ENST00000354679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31■■■□□ 2.55
HCFC1R1-202ENST00000354679 DEPDC5O75140 1603 aa30.99■■■□□ 2.55
HCFC1R1-202ENST00000354679 CEP152O94986 1710 aa30.99■■■□□ 2.55
HCFC1R1-202ENST00000354679 CEP170BQ9Y4F5 1589 aaPredicted RBP30.99■■■□□ 2.55
HCFC1R1-202ENST00000354679 STRCQ7RTU9 1775 aa30.97■■■□□ 2.55
HCFC1R1-202ENST00000354679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.97■■■□□ 2.55
HCFC1R1-202ENST00000354679 CAMSAP1Q5T5Y3 1602 aa30.95■■■□□ 2.55
HCFC1R1-202ENST00000354679 KANK1Q14678 1352 aa30.94■■■□□ 2.54
HCFC1R1-202ENST00000354679 ANKRD50Q9ULJ7 1429 aa30.94■■■□□ 2.54
HCFC1R1-202ENST00000354679 A2ML1A8K2U0 1454 aa30.94■■■□□ 2.54
HCFC1R1-202ENST00000354679 ROCK1Q13464 1354 aa30.92■■■□□ 2.54
HCFC1R1-202ENST00000354679 RRBP1Q9P2E9 1410 aaKnown RBP30.92■■■□□ 2.54
HCFC1R1-202ENST00000354679 ITGAEP38570 1179 aa30.92■■■□□ 2.54
HCFC1R1-202ENST00000354679 DMRT2Q9Y5R5 561 aa30.92■■■□□ 2.54
HCFC1R1-202ENST00000354679 SPATA31D1Q6ZQQ2 1576 aa30.89■■■□□ 2.54
HCFC1R1-202ENST00000354679 ERVK-7P63135 1459 aa30.89■■■□□ 2.53
HCFC1R1-202ENST00000354679 ARHGAP31Q2M1Z3 1444 aa30.88■■■□□ 2.53
HCFC1R1-202ENST00000354679 VWDEQ8N2E2 1590 aa30.88■■■□□ 2.53
HCFC1R1-202ENST00000354679 NLRP1Q9C000 1473 aa30.87■■■□□ 2.53
HCFC1R1-202ENST00000354679 PLA2R1Q13018 1463 aa30.86■■■□□ 2.53
HCFC1R1-202ENST00000354679 LMTK2Q8IWU2 1503 aa30.86■■■□□ 2.53
HCFC1R1-202ENST00000354679 PTPRTO14522 1441 aa30.84■■■□□ 2.53
HCFC1R1-202ENST00000354679 CFAP65Q6ZU64 1925 aaKnown RBP30.81■■■□□ 2.52
HCFC1R1-202ENST00000354679 NCKAP5LQ9HCH0 1330 aa30.8■■■□□ 2.52
HCFC1R1-202ENST00000354679 PKD2Q13563 968 aa30.78■■■□□ 2.52
HCFC1R1-202ENST00000354679 UGGT1Q9NYU2 1555 aa30.78■■■□□ 2.52
HCFC1R1-202ENST00000354679 UNC13BO14795 1591 aa30.76■■■□□ 2.52
HCFC1R1-202ENST00000354679 EFCAB6Q5THR3 1501 aa30.76■■■□□ 2.51
HCFC1R1-202ENST00000354679 THEMISQ8N1K5 641 aaPredicted RBP30.74■■■□□ 2.51
HCFC1R1-202ENST00000354679 ILDR1Q86SU0 546 aaPredicted RBP30.69■■■□□ 2.5
HCFC1R1-202ENST00000354679 TET3O43151 1660 aa30.68■■■□□ 2.5
HCFC1R1-202ENST00000354679 POLR1AO95602 1720 aaPredicted RBP30.66■■■□□ 2.5
HCFC1R1-202ENST00000354679 NOS1P29475 1434 aa30.65■■■□□ 2.5
HCFC1R1-202ENST00000354679 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
HCFC1R1-202ENST00000354679 ANKLE2Q86XL3 938 aa30.65■■■□□ 2.5
HCFC1R1-202ENST00000354679 UBR1Q8IWV7 1749 aa30.64■■■□□ 2.5
HCFC1R1-202ENST00000354679 CERKQ8TCT0 537 aa30.64■■■□□ 2.5
HCFC1R1-202ENST00000354679 SYNMO15061 1565 aa30.63■■■□□ 2.49
HCFC1R1-202ENST00000354679 NEURL4Q96JN8 1562 aa30.63■■■□□ 2.49
HCFC1R1-202ENST00000354679 IQGAP3Q86VI3 1631 aa30.63■■■□□ 2.49
HCFC1R1-202ENST00000354679 GCC2Q8IWJ2 1684 aa30.63■■■□□ 2.49
HCFC1R1-202ENST00000354679 NUP155O75694 1391 aa30.63■■■□□ 2.49
HCFC1R1-202ENST00000354679 PIK3C2BO00750 1634 aa30.6■■■□□ 2.49
HCFC1R1-202ENST00000354679 NAIPQ13075 1403 aa30.6■■■□□ 2.49
HCFC1R1-202ENST00000354679 FBXO41Q8TF61 875 aa30.6■■■□□ 2.49
HCFC1R1-202ENST00000354679 IDI1Q13907 227 aa30.57■■■□□ 2.48
HCFC1R1-202ENST00000354679 LTBP4Q8N2S1 1624 aa30.57■■■□□ 2.48
HCFC1R1-202ENST00000354679 STAG3Q9UJ98 1225 aa30.55■■■□□ 2.48
HCFC1R1-202ENST00000354679 MED14O60244 1454 aa30.55■■■□□ 2.48
HCFC1R1-202ENST00000354679 E9PCH4 1651 aa30.55■■■□□ 2.48
HCFC1R1-202ENST00000354679 HFM1A2PYH4 1435 aa30.55■■■□□ 2.48
HCFC1R1-202ENST00000354679 NPHP4O75161 1426 aaPredicted RBP30.55■■■□□ 2.48
HCFC1R1-202ENST00000354679 ZNF335Q9H4Z2 1342 aaPredicted RBP30.54■■■□□ 2.48
HCFC1R1-202ENST00000354679 SLC52A1Q9NWF4 448 aa30.54■■■□□ 2.48
HCFC1R1-202ENST00000354679 SLIT1O75093 1534 aa30.53■■■□□ 2.48
HCFC1R1-202ENST00000354679 ARHGAP23Q9P227 1491 aa30.52■■■□□ 2.48
HCFC1R1-202ENST00000354679 KDM5AP29375 1690 aaKnown RBP30.52■■■□□ 2.48
HCFC1R1-202ENST00000354679 SCAF11Q99590 1463 aaKnown RBP30.5■■■□□ 2.47
HCFC1R1-202ENST00000354679 ADGRB3O60242 1522 aa30.49■■■□□ 2.47
HCFC1R1-202ENST00000354679 TMEM2Q9UHN6 1383 aa30.48■■■□□ 2.47
HCFC1R1-202ENST00000354679 IQGAP1P46940 1657 aa30.48■■■□□ 2.47
HCFC1R1-202ENST00000354679 LTKP29376 864 aa30.46■■■□□ 2.47
HCFC1R1-202ENST00000354679 TXNDC2Q86VQ3 553 aa30.46■■■□□ 2.47
HCFC1R1-202ENST00000354679 EID1Q9Y6B2 187 aa30.45■■■□□ 2.47
HCFC1R1-202ENST00000354679 IQSEC2Q5JU85 1478 aa30.4■■■□□ 2.46
HCFC1R1-202ENST00000354679 TRIM52Q96A61 297 aa30.39■■■□□ 2.46
HCFC1R1-202ENST00000354679 TMEM131LA2VDJ0 1609 aa30.36■■■□□ 2.45
HCFC1R1-202ENST00000354679 SPHKAPQ2M3C7 1700 aa30.34■■■□□ 2.45
HCFC1R1-202ENST00000354679 CPS1P31327 1500 aa30.34■■■□□ 2.45
HCFC1R1-202ENST00000354679 CHGAP10645 457 aaKnown RBP30.34■■■□□ 2.45
HCFC1R1-202ENST00000354679 MYO5BQ9ULV0 1848 aa30.33■■■□□ 2.45
HCFC1R1-202ENST00000354679 ZFYVE9O95405 1425 aa30.3■■■□□ 2.44
HCFC1R1-202ENST00000354679 RIMS2Q9UQ26 1411 aa30.3■■■□□ 2.44
HCFC1R1-202ENST00000354679 SLC4A1APQ9BWU0 796 aaKnown RBP30.27■■■□□ 2.44
HCFC1R1-202ENST00000354679 HDGFP51858 240 aaKnown RBP30.25■■■□□ 2.43
HCFC1R1-202ENST00000354679 TRPM2O94759 1503 aa30.25■■■□□ 2.43
HCFC1R1-202ENST00000354679 STRCP1A6NGW2 1772 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms