RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 ZNF644Q9H582 1327 aaPredicted RBP20.9■□□□□ 0.94
CD74-202ENST00000353334 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.93
CD74-202ENST00000353334 TIAM1Q13009 1591 aa20.88■□□□□ 0.93
CD74-202ENST00000353334 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
CD74-202ENST00000353334 TNRQ92752 1358 aa20.87■□□□□ 0.93
CD74-202ENST00000353334 VWDEQ8N2E2 1590 aa20.86■□□□□ 0.93
CD74-202ENST00000353334 MBD5Q9P267 1494 aa20.86■□□□□ 0.93
CD74-202ENST00000353334 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
CD74-202ENST00000353334 TOM1O60784 492 aa20.86■□□□□ 0.93
CD74-202ENST00000353334 MTUS2Q5JR59 1369 aa20.84■□□□□ 0.93
CD74-202ENST00000353334 PZPP20742 1482 aa20.84■□□□□ 0.93
CD74-202ENST00000353334 KDM5DQ9BY66 1539 aa20.83■□□□□ 0.92
CD74-202ENST00000353334 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
CD74-202ENST00000353334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.82■□□□□ 0.92
CD74-202ENST00000353334 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
CD74-202ENST00000353334 KIF3BO15066 747 aa20.79■□□□□ 0.92
CD74-202ENST00000353334 ANKLE2Q86XL3 938 aa20.78■□□□□ 0.92
CD74-202ENST00000353334 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
CD74-202ENST00000353334 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
CD74-202ENST00000353334 NPHP4O75161 1426 aaPredicted RBP20.77■□□□□ 0.92
CD74-202ENST00000353334 EHBP1L1Q8N3D4 1523 aa20.77■□□□□ 0.92
CD74-202ENST00000353334 DEPDC5O75140 1603 aa20.77■□□□□ 0.92
CD74-202ENST00000353334 STRCP1A6NGW2 1772 aa20.77■□□□□ 0.92
CD74-202ENST00000353334 UGGT1Q9NYU2 1555 aa20.77■□□□□ 0.91
CD74-202ENST00000353334 IQGAP1P46940 1657 aa20.76■□□□□ 0.91
CD74-202ENST00000353334 FAM135AQ9P2D6 1515 aa20.76■□□□□ 0.91
CD74-202ENST00000353334 MED14O60244 1454 aa20.74■□□□□ 0.91
CD74-202ENST00000353334 NLRP1Q9C000 1473 aa20.74■□□□□ 0.91
CD74-202ENST00000353334 MIA2Q96PC5 1412 aa20.74■□□□□ 0.91
CD74-202ENST00000353334 CCDC141Q6ZP82 1450 aa20.74■□□□□ 0.91
CD74-202ENST00000353334 WASHC2CQ9Y4E1 1318 aa20.73■□□□□ 0.91
CD74-202ENST00000353334 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
CD74-202ENST00000353334 CAMSAP2Q08AD1 1489 aa20.72■□□□□ 0.91
CD74-202ENST00000353334 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
CD74-202ENST00000353334 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
CD74-202ENST00000353334 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
CD74-202ENST00000353334 SYNMO15061 1565 aa20.69■□□□□ 0.9
CD74-202ENST00000353334 NCOA2Q15596 1464 aa20.65■□□□□ 0.9
CD74-202ENST00000353334 ZC3H13Q5T200 1668 aaKnown RBP20.65■□□□□ 0.9
CD74-202ENST00000353334 ABCC3O15438 1527 aa20.65■□□□□ 0.9
CD74-202ENST00000353334 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
CD74-202ENST00000353334 ERVK-7P63135 1459 aa20.62■□□□□ 0.89
CD74-202ENST00000353334 UBR1Q8IWV7 1749 aa20.61■□□□□ 0.89
CD74-202ENST00000353334 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
CD74-202ENST00000353334 CEP152O94986 1710 aa20.59■□□□□ 0.89
CD74-202ENST00000353334 XIRP1Q702N8 1843 aaKnown RBP20.59■□□□□ 0.89
CD74-202ENST00000353334 MROH1Q8NDA8 1641 aa20.59■□□□□ 0.89
CD74-202ENST00000353334 CFAP65Q6ZU64 1925 aaKnown RBP20.57■□□□□ 0.88
CD74-202ENST00000353334 SCAF11Q99590 1463 aaKnown RBP20.57■□□□□ 0.88
CD74-202ENST00000353334 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
CD74-202ENST00000353334 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
CD74-202ENST00000353334 TSPY4P0CV99 314 aa20.53■□□□□ 0.88
CD74-202ENST00000353334 TSPY10P0CW01 314 aa20.53■□□□□ 0.88
CD74-202ENST00000353334 MAST1Q9Y2H9 1570 aa20.53■□□□□ 0.88
CD74-202ENST00000353334 LTKP29376 864 aa20.52■□□□□ 0.87
CD74-202ENST00000353334 ARHGAP23Q9P227 1491 aa20.51■□□□□ 0.87
CD74-202ENST00000353334 SLIT1O75093 1534 aa20.5■□□□□ 0.87
CD74-202ENST00000353334 HRCP23327 699 aa20.47■□□□□ 0.87
CD74-202ENST00000353334 TXNDC2Q86VQ3 553 aa20.47■□□□□ 0.87
CD74-202ENST00000353334 PIK3C2BO00750 1634 aa20.46■□□□□ 0.87
CD74-202ENST00000353334 POTEAQ6S8J7 498 aa20.45■□□□□ 0.86
CD74-202ENST00000353334 ROBO1Q9Y6N7 1651 aa20.43■□□□□ 0.86
CD74-202ENST00000353334 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
CD74-202ENST00000353334 PRDM15P57071 1507 aaPredicted RBP20.43■□□□□ 0.86
CD74-202ENST00000353334 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
CD74-202ENST00000353334 SETD1AO15047 1707 aaKnown RBP20.42■□□□□ 0.86
CD74-202ENST00000353334 LRRC9Q6ZRR7 1453 aa20.42■□□□□ 0.86
CD74-202ENST00000353334 TMEM94Q12767 1356 aa20.41■□□□□ 0.86
CD74-202ENST00000353334 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
CD74-202ENST00000353334 EID1Q9Y6B2 187 aa20.4■□□□□ 0.86
CD74-202ENST00000353334 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
CD74-202ENST00000353334 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
CD74-202ENST00000353334 RBM33Q96EV2 1170 aaKnown RBP20.38■□□□□ 0.85
CD74-202ENST00000353334 KIF15Q9NS87 1388 aa20.36■□□□□ 0.85
CD74-202ENST00000353334 CROCC2H7BZ55 1655 aa20.36■□□□□ 0.85
CD74-202ENST00000353334 EFCAB6Q5THR3 1501 aa20.35■□□□□ 0.85
CD74-202ENST00000353334 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
CD74-202ENST00000353334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.857e-12■■■■□ 20.4
CD74-202ENST00000353334 TET3O43151 1660 aa20.34■□□□□ 0.85
CD74-202ENST00000353334 KDM5AP29375 1690 aaKnown RBP20.33■□□□□ 0.85
CD74-202ENST00000353334 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.84
CD74-202ENST00000353334 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.84
CD74-202ENST00000353334 ERBINQ96RT1 1412 aa20.33■□□□□ 0.84
CD74-202ENST00000353334 KCNA6P17658 529 aa20.32■□□□□ 0.84
CD74-202ENST00000353334 PROSER2Q86WR7 435 aaPredicted RBP20.32■□□□□ 0.84
CD74-202ENST00000353334 STAG3Q9UJ98 1225 aa20.32■□□□□ 0.84
CD74-202ENST00000353334 PHLPP1O60346 1717 aa20.32■□□□□ 0.84
CD74-202ENST00000353334 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
CD74-202ENST00000353334 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
CD74-202ENST00000353334 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
CD74-202ENST00000353334 NKTRP30414 1462 aaKnown RBP20.29■□□□□ 0.84
CD74-202ENST00000353334 IDI1Q13907 227 aa20.28■□□□□ 0.84
CD74-202ENST00000353334 ABCC5O15440 1437 aa20.28■□□□□ 0.84
CD74-202ENST00000353334 ADGRB3O60242 1522 aa20.27■□□□□ 0.84
CD74-202ENST00000353334 KANK1Q14678 1352 aa20.25■□□□□ 0.83
CD74-202ENST00000353334 MSH6P52701 1360 aa20.24■□□□□ 0.83
CD74-202ENST00000353334 LMTK2Q8IWU2 1503 aa20.24■□□□□ 0.83
CD74-202ENST00000353334 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
CD74-202ENST00000353334 PTPN23Q9H3S7 1636 aa20.24■□□□□ 0.83
CD74-202ENST00000353334 JCADQ9P266 1359 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms