RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 ESF1Q9H501 851 aaKnown RBP39.73■■■■□ 3.95
H2AFV-204ENST00000350771 PTPRKQ15262 1439 aa39.72■■■■□ 3.95
H2AFV-204ENST00000350771 FAM135AQ9P2D6 1515 aa39.71■■■■□ 3.95
H2AFV-204ENST00000350771 HSPA2P54652 639 aa39.71■■■■□ 3.95
H2AFV-204ENST00000350771 ERBINQ96RT1 1412 aa39.71■■■■□ 3.95
H2AFV-204ENST00000350771 KIF3BO15066 747 aa39.7■■■■□ 3.95
H2AFV-204ENST00000350771 CEBPAP49715 358 aaPredicted RBP39.7■■■■□ 3.95
H2AFV-204ENST00000350771 GGT6Q6P531 493 aa39.67■■■■□ 3.94
H2AFV-204ENST00000350771 CHIC2Q9UKJ5 165 aa39.67■■■■□ 3.94
H2AFV-204ENST00000350771 C3P01024 1663 aa39.67■■■■□ 3.94
H2AFV-204ENST00000350771 RRP7BPQ9NSQ0 103 aa39.66■■■■□ 3.94
H2AFV-204ENST00000350771 CLTCQ00610 1675 aaKnown RBP39.65■■■■□ 3.94
H2AFV-204ENST00000350771 ROCK1Q13464 1354 aa39.62■■■■□ 3.93
H2AFV-204ENST00000350771 MROH1Q8NDA8 1641 aa39.62■■■■□ 3.93
H2AFV-204ENST00000350771 KDM5DQ9BY66 1539 aa39.59■■■■□ 3.93
H2AFV-204ENST00000350771 DEPDC5O75140 1603 aa39.57■■■■□ 3.92
H2AFV-204ENST00000350771 ZMYM3Q14202 1370 aa39.56■■■■□ 3.92
H2AFV-204ENST00000350771 UHRF1BP1Q6BDS2 1440 aa39.56■■■■□ 3.92
H2AFV-204ENST00000350771 PRDM15P57071 1507 aaPredicted RBP39.55■■■■□ 3.92
H2AFV-204ENST00000350771 ZC3H13Q5T200 1668 aaKnown RBP39.52■■■■□ 3.92
H2AFV-204ENST00000350771 ABCC3O15438 1527 aa39.49■■■■□ 3.91
H2AFV-204ENST00000350771 NPATQ14207 1427 aa39.48■■■■□ 3.91
H2AFV-204ENST00000350771 ANKRD50Q9ULJ7 1429 aa39.48■■■■□ 3.91
H2AFV-204ENST00000350771 FBXO41Q8TF61 875 aa39.47■■■■□ 3.91
H2AFV-204ENST00000350771 WASHC2CQ9Y4E1 1318 aa39.45■■■■□ 3.91
H2AFV-204ENST00000350771 ITGAEP38570 1179 aa39.42■■■■□ 3.9
H2AFV-204ENST00000350771 VWDEQ8N2E2 1590 aa39.42■■■■□ 3.9
H2AFV-204ENST00000350771 PZPP20742 1482 aa39.4■■■■□ 3.9
H2AFV-204ENST00000350771 DMRT2Q9Y5R5 561 aa39.39■■■■□ 3.9
H2AFV-204ENST00000350771 CEP152O94986 1710 aa39.38■■■■□ 3.89
H2AFV-204ENST00000350771 STRCQ7RTU9 1775 aa39.37■■■■□ 3.89
H2AFV-204ENST00000350771 CAMSAP1Q5T5Y3 1602 aa39.35■■■■□ 3.89
H2AFV-204ENST00000350771 LMTK2Q8IWU2 1503 aa39.34■■■■□ 3.89
H2AFV-204ENST00000350771 UNC13BO14795 1591 aa39.33■■■■□ 3.89
H2AFV-204ENST00000350771 KANK1Q14678 1352 aa39.3■■■■□ 3.88
H2AFV-204ENST00000350771 ARHGAP31Q2M1Z3 1444 aa39.29■■■■□ 3.88
H2AFV-204ENST00000350771 GCC2Q8IWJ2 1684 aa39.28■■■■□ 3.88
H2AFV-204ENST00000350771 NAIPQ13075 1403 aa39.25■■■■□ 3.87
H2AFV-204ENST00000350771 MYO3AQ8NEV4 1616 aa39.25■■■■□ 3.87
H2AFV-204ENST00000350771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.24■■■■□ 3.873e-6■□□□□ 11.3
H2AFV-204ENST00000350771 HFM1A2PYH4 1435 aa39.23■■■■□ 3.87
H2AFV-204ENST00000350771 ZNF142P52746 1687 aaPredicted RBP39.22■■■■□ 3.87
H2AFV-204ENST00000350771 SPATA31D1Q6ZQQ2 1576 aa39.22■■■■□ 3.87
H2AFV-204ENST00000350771 CERKQ8TCT0 537 aa39.21■■■■□ 3.87
H2AFV-204ENST00000350771 FBXO31Q5XUX0 539 aaPredicted RBP39.2■■■■□ 3.87
H2AFV-204ENST00000350771 PTPRTO14522 1441 aa39.18■■■■□ 3.86
H2AFV-204ENST00000350771 EFCAB6Q5THR3 1501 aa39.18■■■■□ 3.86
H2AFV-204ENST00000350771 ERVK-7P63135 1459 aa39.17■■■■□ 3.86
H2AFV-204ENST00000350771 TNRQ92752 1358 aa39.17■■■■□ 3.86
H2AFV-204ENST00000350771 IQGAP3Q86VI3 1631 aa39.15■■■■□ 3.86
H2AFV-204ENST00000350771 TET3O43151 1660 aa39.14■■■■□ 3.86
H2AFV-204ENST00000350771 CEP170BQ9Y4F5 1589 aaPredicted RBP39.14■■■■□ 3.86
H2AFV-204ENST00000350771 A2ML1A8K2U0 1454 aa39.1■■■■□ 3.85
H2AFV-204ENST00000350771 NLRP1Q9C000 1473 aa39.09■■■■□ 3.85
H2AFV-204ENST00000350771 CFAP65Q6ZU64 1925 aaKnown RBP39.08■■■■□ 3.85
H2AFV-204ENST00000350771 RPRD2Q5VT52 1461 aaKnown RBP39.08■■■■□ 3.85
H2AFV-204ENST00000350771 NUP155O75694 1391 aa39.04■■■■□ 3.84
H2AFV-204ENST00000350771 PLA2R1Q13018 1463 aa39■■■■□ 3.83
H2AFV-204ENST00000350771 NOS1P29475 1434 aa39■■■■□ 3.83
H2AFV-204ENST00000350771 E9PCH4 1651 aa38.97■■■■□ 3.83
H2AFV-204ENST00000350771 SYNMO15061 1565 aa38.95■■■■□ 3.83
H2AFV-204ENST00000350771 PKD2Q13563 968 aa38.95■■■■□ 3.83
H2AFV-204ENST00000350771 NCKAP5LQ9HCH0 1330 aa38.91■■■■□ 3.82
H2AFV-204ENST00000350771 UGGT1Q9NYU2 1555 aa38.91■■■■□ 3.82
H2AFV-204ENST00000350771 UBR1Q8IWV7 1749 aa38.86■■■■□ 3.81
H2AFV-204ENST00000350771 LTBP4Q8N2S1 1624 aa38.85■■■■□ 3.81
H2AFV-204ENST00000350771 KDM5AP29375 1690 aaKnown RBP38.85■■■■□ 3.81
H2AFV-204ENST00000350771 SETD5Q9C0A6 1442 aa38.83■■■■□ 3.81
H2AFV-204ENST00000350771 PIK3C2BO00750 1634 aa38.83■■■■□ 3.81
H2AFV-204ENST00000350771 THEMISQ8N1K5 641 aaPredicted RBP38.8■■■■□ 3.8
H2AFV-204ENST00000350771 SLC52A1Q9NWF4 448 aa38.79■■■■□ 3.8
H2AFV-204ENST00000350771 IQSEC2Q5JU85 1478 aa38.79■■■■□ 3.8
H2AFV-204ENST00000350771 POLR1AO95602 1720 aaPredicted RBP38.77■■■■□ 3.8
H2AFV-204ENST00000350771 IDI1Q13907 227 aa38.76■■■■□ 3.8
H2AFV-204ENST00000350771 ACIN1Q9UKV3 1341 aaKnown RBP38.76■■■■□ 3.8
H2AFV-204ENST00000350771 SPHKAPQ2M3C7 1700 aa38.74■■■■□ 3.79
H2AFV-204ENST00000350771 TRIM52Q96A61 297 aa38.73■■■■□ 3.79
H2AFV-204ENST00000350771 ADGRB3O60242 1522 aa38.72■■■■□ 3.79
H2AFV-204ENST00000350771 ARHGAP23Q9P227 1491 aa38.72■■■■□ 3.79
H2AFV-204ENST00000350771 SLIT1O75093 1534 aa38.71■■■■□ 3.79
H2AFV-204ENST00000350771 NEURL4Q96JN8 1562 aa38.7■■■■□ 3.79
H2AFV-204ENST00000350771 RAB3GAP2Q9H2M9 1393 aa38.69■■■■□ 3.78
H2AFV-204ENST00000350771 ZNF335Q9H4Z2 1342 aaPredicted RBP38.68■■■■□ 3.78
H2AFV-204ENST00000350771 ANKLE2Q86XL3 938 aa38.65■■■■□ 3.78
H2AFV-204ENST00000350771 MED14O60244 1454 aa38.65■■■■□ 3.78
H2AFV-204ENST00000350771 SLC4A1APQ9BWU0 796 aaKnown RBP38.64■■■■□ 3.78
H2AFV-204ENST00000350771 TRPM2O94759 1503 aa38.63■■■■□ 3.78
H2AFV-204ENST00000350771 TMEM131LA2VDJ0 1609 aa38.63■■■■□ 3.78
H2AFV-204ENST00000350771 TMEM2Q9UHN6 1383 aa38.61■■■■□ 3.77
H2AFV-204ENST00000350771 HRCP23327 699 aa38.6■■■■□ 3.77
H2AFV-204ENST00000350771 MYO5BQ9ULV0 1848 aa38.59■■■■□ 3.77
H2AFV-204ENST00000350771 SCAF11Q99590 1463 aaKnown RBP38.56■■■■□ 3.76
H2AFV-204ENST00000350771 STAG3Q9UJ98 1225 aa38.56■■■■□ 3.76
H2AFV-204ENST00000350771 MPHOSPH9Q99550 1183 aa38.55■■■■□ 3.76
H2AFV-204ENST00000350771 CLTCL1P53675 1640 aa38.53■■■■□ 3.76
H2AFV-204ENST00000350771 NPHP4O75161 1426 aaPredicted RBP38.52■■■■□ 3.76
H2AFV-204ENST00000350771 IQGAP1P46940 1657 aa38.52■■■■□ 3.76
H2AFV-204ENST00000350771 LTKP29376 864 aa38.5■■■■□ 3.75
H2AFV-204ENST00000350771 ZFYVE9O95405 1425 aa38.49■■■■□ 3.75
H2AFV-204ENST00000350771 TXNDC2Q86VQ3 553 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms