RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
SCARF1-202ENST00000348987 ABCC10Q5T3U5 1492 aa24.92■■□□□ 1.58
SCARF1-202ENST00000348987 KDM2AQ9Y2K7 1162 aa24.91■■□□□ 1.58
SCARF1-202ENST00000348987 WASHC2CQ9Y4E1 1318 aa24.9■■□□□ 1.58
SCARF1-202ENST00000348987 CDC42BPAQ5VT25 1732 aa24.9■■□□□ 1.58
SCARF1-202ENST00000348987 TSPY4P0CV99 314 aa24.88■■□□□ 1.57
SCARF1-202ENST00000348987 TSPY10P0CW01 314 aa24.88■■□□□ 1.57
SCARF1-202ENST00000348987 POLR1AO95602 1720 aaPredicted RBP24.88■■□□□ 1.57
SCARF1-202ENST00000348987 PDE4AP27815 886 aa24.87■■□□□ 1.57
SCARF1-202ENST00000348987 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
SCARF1-202ENST00000348987 ERCC6L2Q5T890 1561 aa24.86■■□□□ 1.57
SCARF1-202ENST00000348987 KIF15Q9NS87 1388 aa24.84■■□□□ 1.57
SCARF1-202ENST00000348987 TCERG1O14776 1098 aaKnown RBP24.84■■□□□ 1.57
SCARF1-202ENST00000348987 BRPF3Q9ULD4 1205 aa24.84■■□□□ 1.57
SCARF1-202ENST00000348987 KDM5CP41229 1560 aa24.83■■□□□ 1.57
SCARF1-202ENST00000348987 DCAF11Q8TEB1 546 aa24.82■■□□□ 1.56
SCARF1-202ENST00000348987 PPM1GO15355 546 aaPredicted RBP24.82■■□□□ 1.56
SCARF1-202ENST00000348987 ST20-MTHFSA0A0A6YYL1 179 aa24.82■■□□□ 1.56
SCARF1-202ENST00000348987 UBE2Q2Q8WVN8 375 aa24.82■■□□□ 1.56
SCARF1-202ENST00000348987 EXOC6Q8TAG9 804 aa24.81■■□□□ 1.56
SCARF1-202ENST00000348987 BACH2Q9BYV9 841 aa24.81■■□□□ 1.56
SCARF1-202ENST00000348987 SHANK2Q9UPX8 1470 aa24.81■■□□□ 1.56
SCARF1-202ENST00000348987 UHRF1BP1Q6BDS2 1440 aa24.8■■□□□ 1.56
SCARF1-202ENST00000348987 RALGAPBQ86X10 1494 aa24.78■■□□□ 1.56
SCARF1-202ENST00000348987 PNISRQ8TF01 805 aaKnown RBP24.76■■□□□ 1.55
SCARF1-202ENST00000348987 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
SCARF1-202ENST00000348987 GSE1Q14687 1217 aa24.74■■□□□ 1.55
SCARF1-202ENST00000348987 ARID4BQ4LE39 1312 aaPredicted RBP24.72■■□□□ 1.55
SCARF1-202ENST00000348987 TMC1Q8TDI8 760 aa24.72■■□□□ 1.55
SCARF1-202ENST00000348987 EIF5BO60841 1220 aaKnown RBP24.71■■□□□ 1.55
SCARF1-202ENST00000348987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.71■■□□□ 1.55
SCARF1-202ENST00000348987 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
SCARF1-202ENST00000348987 RGL3Q3MIN7 710 aa24.7■■□□□ 1.55
SCARF1-202ENST00000348987 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
SCARF1-202ENST00000348987 MS4A1P11836 297 aa24.69■■□□□ 1.54
SCARF1-202ENST00000348987 SAMD9LQ8IVG5 1584 aa24.69■■□□□ 1.54
SCARF1-202ENST00000348987 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
SCARF1-202ENST00000348987 ROCK2O75116 1388 aaKnown RBP24.67■■□□□ 1.54
SCARF1-202ENST00000348987 CCDC141Q6ZP82 1450 aa24.67■■□□□ 1.54
SCARF1-202ENST00000348987 NBPF1Q3BBV0 1214 aa24.66■■□□□ 1.54
SCARF1-202ENST00000348987 FAM135AQ9P2D6 1515 aa24.66■■□□□ 1.54
SCARF1-202ENST00000348987 ARHGEF5Q12774 1597 aa24.66■■□□□ 1.54
SCARF1-202ENST00000348987 CDC42BPBQ9Y5S2 1711 aa24.66■■□□□ 1.54
SCARF1-202ENST00000348987 NFKBIBQ15653 356 aa24.65■■□□□ 1.54
SCARF1-202ENST00000348987 RCAN3Q9UKA8 241 aa24.65■■□□□ 1.54
SCARF1-202ENST00000348987 TTC37Q6PGP7 1564 aa24.64■■□□□ 1.54
SCARF1-202ENST00000348987 SKAP1Q86WV1 359 aa24.64■■□□□ 1.54
SCARF1-202ENST00000348987 FRAT1Q92837 279 aaPredicted RBP24.63■■□□□ 1.53
SCARF1-202ENST00000348987 ARHGAP5Q13017 1502 aa24.62■■□□□ 1.53
SCARF1-202ENST00000348987 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
SCARF1-202ENST00000348987 SLC4A3P48751 1232 aa24.62■■□□□ 1.53
SCARF1-202ENST00000348987 DDRGK1Q96HY6 314 aa24.61■■□□□ 1.53
SCARF1-202ENST00000348987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.6■■□□□ 1.53
SCARF1-202ENST00000348987 PLA2R1Q13018 1463 aa24.6■■□□□ 1.53
SCARF1-202ENST00000348987 CCDC144AA2RUR9 1427 aa24.6■■□□□ 1.53
SCARF1-202ENST00000348987 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
SCARF1-202ENST00000348987 ABCC2Q92887 1545 aa24.58■■□□□ 1.53
SCARF1-202ENST00000348987 PRAG1Q86YV5 1406 aa24.57■■□□□ 1.52
SCARF1-202ENST00000348987 RSPH4AQ5TD94 716 aa24.56■■□□□ 1.52
SCARF1-202ENST00000348987 MYBBP1AQ9BQG0 1328 aaKnown RBP24.56■■□□□ 1.52
SCARF1-202ENST00000348987 LRPPRCP42704 1394 aaKnown RBP24.56■■□□□ 1.52
SCARF1-202ENST00000348987 PLEKHH2Q8IVE3 1493 aa24.54■■□□□ 1.52
SCARF1-202ENST00000348987 PLIN1O60240 522 aa24.52■■□□□ 1.52
SCARF1-202ENST00000348987 RALBP1Q15311 655 aa24.52■■□□□ 1.52
SCARF1-202ENST00000348987 BRD4O60885 1362 aaPredicted RBP24.51■■□□□ 1.51
SCARF1-202ENST00000348987 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
SCARF1-202ENST00000348987 A2MP01023 1474 aa24.51■■□□□ 1.51
SCARF1-202ENST00000348987 PER1O15534 1290 aaPredicted RBP24.49■■□□□ 1.51
SCARF1-202ENST00000348987 DAXXQ9UER7 740 aaPredicted RBP24.49■■□□□ 1.51
SCARF1-202ENST00000348987 TRPM1Q7Z4N2 1603 aa24.48■■□□□ 1.51
SCARF1-202ENST00000348987 CDCA7LQ96GN5 454 aa24.47■■□□□ 1.51
SCARF1-202ENST00000348987 TESK2Q96S53 571 aa24.47■■□□□ 1.51
SCARF1-202ENST00000348987 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
SCARF1-202ENST00000348987 ZCCHC11Q5TAX3 1644 aaKnown RBP24.47■■□□□ 1.51
SCARF1-202ENST00000348987 AFAP1Q8N556 730 aa24.47■■□□□ 1.51
SCARF1-202ENST00000348987 E9PCH4 1651 aa24.46■■□□□ 1.51
SCARF1-202ENST00000348987 CC2D1BQ5T0F9 858 aaKnown RBP24.45■■□□□ 1.5
SCARF1-202ENST00000348987 CRBNQ96SW2 442 aa24.44■■□□□ 1.5
SCARF1-202ENST00000348987 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
SCARF1-202ENST00000348987 MYO5CQ9NQX4 1742 aa24.44■■□□□ 1.5
SCARF1-202ENST00000348987 NLRP13Q86W25 1043 aa24.44■■□□□ 1.5
SCARF1-202ENST00000348987 GPRASP1Q5JY77 1395 aa24.43■■□□□ 1.5
SCARF1-202ENST00000348987 KTN1Q86UP2 1357 aaKnown RBP24.43■■□□□ 1.5
SCARF1-202ENST00000348987 UNC13BO14795 1591 aa24.43■■□□□ 1.5
SCARF1-202ENST00000348987 FRAT2O75474 233 aaPredicted RBP24.42■■□□□ 1.5
SCARF1-202ENST00000348987 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
SCARF1-202ENST00000348987 TRAPPC8Q9Y2L5 1435 aa24.42■■□□□ 1.5
SCARF1-202ENST00000348987 PDE3BQ13370 1112 aa24.41■■□□□ 1.5
SCARF1-202ENST00000348987 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
SCARF1-202ENST00000348987 MAST1Q9Y2H9 1570 aa24.4■■□□□ 1.5
SCARF1-202ENST00000348987 PANK3Q9H999 370 aa24.4■■□□□ 1.5
SCARF1-202ENST00000348987 PLCH2O75038 1416 aa24.38■■□□□ 1.49
SCARF1-202ENST00000348987 FAM43AQ8N2R8 423 aa24.38■■□□□ 1.49
SCARF1-202ENST00000348987 COL17A1Q9UMD9 1497 aaPredicted RBP24.37■■□□□ 1.49
SCARF1-202ENST00000348987 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
SCARF1-202ENST00000348987 PRDM15P57071 1507 aaPredicted RBP24.34■■□□□ 1.49
SCARF1-202ENST00000348987 PLXNC1O60486 1568 aa24.34■■□□□ 1.49
SCARF1-202ENST00000348987 ERBINQ96RT1 1412 aa24.34■■□□□ 1.49
SCARF1-202ENST00000348987 UHRF1BP1LA0JNW5 1464 aa24.33■■□□□ 1.48
SCARF1-202ENST00000348987 DUOX2Q9NRD8 1548 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms