RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 ZNF142P52746 1687 aaPredicted RBP20.82■□□□□ 0.92
CLCC1-202ENST00000348264 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
CLCC1-202ENST00000348264 EIF2AK4Q9P2K8 1649 aaKnown RBP20.81■□□□□ 0.92
CLCC1-202ENST00000348264 SHANK2Q9UPX8 1470 aa20.81■□□□□ 0.92
CLCC1-202ENST00000348264 DNMT1P26358 1616 aaKnown RBP20.8■□□□□ 0.92
CLCC1-202ENST00000348264 ABCC5O15440 1437 aa20.79■□□□□ 0.92
CLCC1-202ENST00000348264 CEP170BQ9Y4F5 1589 aaPredicted RBP20.77■□□□□ 0.92
CLCC1-202ENST00000348264 MROH1Q8NDA8 1641 aa20.77■□□□□ 0.92
CLCC1-202ENST00000348264 DAPK1P53355 1430 aa20.77■□□□□ 0.91
CLCC1-202ENST00000348264 CAMSAP1Q5T5Y3 1602 aa20.76■□□□□ 0.91
CLCC1-202ENST00000348264 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
CLCC1-202ENST00000348264 NCOA1Q15788 1441 aa20.76■□□□□ 0.91
CLCC1-202ENST00000348264 PZPP20742 1482 aa20.75■□□□□ 0.91
CLCC1-202ENST00000348264 ZC3H13Q5T200 1668 aaKnown RBP20.74■□□□□ 0.91
CLCC1-202ENST00000348264 ABCC3O15438 1527 aa20.73■□□□□ 0.91
CLCC1-202ENST00000348264 KIF15Q9NS87 1388 aa20.72■□□□□ 0.91
CLCC1-202ENST00000348264 CEP152O94986 1710 aa20.72■□□□□ 0.91
CLCC1-202ENST00000348264 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
CLCC1-202ENST00000348264 PTPRTO14522 1441 aa20.7■□□□□ 0.9
CLCC1-202ENST00000348264 A2ML1A8K2U0 1454 aa20.69■□□□□ 0.9
CLCC1-202ENST00000348264 FBXO31Q5XUX0 539 aaPredicted RBP20.69■□□□□ 0.9
CLCC1-202ENST00000348264 TNRQ92752 1358 aa20.69■□□□□ 0.9
CLCC1-202ENST00000348264 ERBINQ96RT1 1412 aa20.69■□□□□ 0.9
CLCC1-202ENST00000348264 PRDM15P57071 1507 aaPredicted RBP20.68■□□□□ 0.9
CLCC1-202ENST00000348264 FBXO41Q8TF61 875 aa20.68■□□□□ 0.9
CLCC1-202ENST00000348264 DMRT2Q9Y5R5 561 aa20.68■□□□□ 0.9
CLCC1-202ENST00000348264 PLA2R1Q13018 1463 aa20.68■□□□□ 0.9
CLCC1-202ENST00000348264 RRP7BPQ9NSQ0 103 aa20.66■□□□□ 0.9
CLCC1-202ENST00000348264 DEPDC5O75140 1603 aa20.66■□□□□ 0.9
CLCC1-202ENST00000348264 CHIC2Q9UKJ5 165 aa20.64■□□□□ 0.89
CLCC1-202ENST00000348264 CFAP65Q6ZU64 1925 aaKnown RBP20.64■□□□□ 0.89
CLCC1-202ENST00000348264 SPATA31D1Q6ZQQ2 1576 aa20.63■□□□□ 0.89
CLCC1-202ENST00000348264 ANKRD30AQ9BXX3 1397 aa20.63■□□□□ 0.89
CLCC1-202ENST00000348264 ADGRL2O95490 1459 aa20.62■□□□□ 0.89
CLCC1-202ENST00000348264 NCKAP5LQ9HCH0 1330 aa20.62■□□□□ 0.89
CLCC1-202ENST00000348264 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
CLCC1-202ENST00000348264 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
CLCC1-202ENST00000348264 ERVK-7P63135 1459 aa20.62■□□□□ 0.89
CLCC1-202ENST00000348264 POLR1AO95602 1720 aaPredicted RBP20.61■□□□□ 0.89
CLCC1-202ENST00000348264 NLRP1Q9C000 1473 aa20.6■□□□□ 0.89
CLCC1-202ENST00000348264 LTBP4Q8N2S1 1624 aa20.59■□□□□ 0.89
CLCC1-202ENST00000348264 PKD2Q13563 968 aa20.57■□□□□ 0.88
CLCC1-202ENST00000348264 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
CLCC1-202ENST00000348264 VWDEQ8N2E2 1590 aa20.56■□□□□ 0.88
CLCC1-202ENST00000348264 UGGT1Q9NYU2 1555 aa20.56■□□□□ 0.88
CLCC1-202ENST00000348264 ARHGAP31Q2M1Z3 1444 aa20.54■□□□□ 0.88
CLCC1-202ENST00000348264 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
CLCC1-202ENST00000348264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
CLCC1-202ENST00000348264 LMTK2Q8IWU2 1503 aa20.53■□□□□ 0.88
CLCC1-202ENST00000348264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.88
CLCC1-202ENST00000348264 KANK1Q14678 1352 aa20.51■□□□□ 0.87
CLCC1-202ENST00000348264 UBR1Q8IWV7 1749 aa20.51■□□□□ 0.87
CLCC1-202ENST00000348264 ANKRD50Q9ULJ7 1429 aa20.5■□□□□ 0.87
CLCC1-202ENST00000348264 ZNF335Q9H4Z2 1342 aaPredicted RBP20.5■□□□□ 0.87
CLCC1-202ENST00000348264 EFCAB6Q5THR3 1501 aa20.49■□□□□ 0.87
CLCC1-202ENST00000348264 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
CLCC1-202ENST00000348264 UNC13BO14795 1591 aa20.46■□□□□ 0.87
CLCC1-202ENST00000348264 IQSEC2Q5JU85 1478 aa20.45■□□□□ 0.86
CLCC1-202ENST00000348264 SYNMO15061 1565 aa20.45■□□□□ 0.86
CLCC1-202ENST00000348264 PIK3C2BO00750 1634 aa20.45■□□□□ 0.86
CLCC1-202ENST00000348264 ROCK1Q13464 1354 aa20.45■□□□□ 0.86
CLCC1-202ENST00000348264 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
CLCC1-202ENST00000348264 MED14O60244 1454 aa20.44■□□□□ 0.86
CLCC1-202ENST00000348264 ANKLE2Q86XL3 938 aa20.44■□□□□ 0.86
CLCC1-202ENST00000348264 NPHP4O75161 1426 aaPredicted RBP20.43■□□□□ 0.86
CLCC1-202ENST00000348264 TET3O43151 1660 aa20.42■□□□□ 0.86
CLCC1-202ENST00000348264 SLIT1O75093 1534 aa20.4■□□□□ 0.86
CLCC1-202ENST00000348264 NOS1P29475 1434 aa20.4■□□□□ 0.86
CLCC1-202ENST00000348264 GCC2Q8IWJ2 1684 aa20.4■□□□□ 0.86
CLCC1-202ENST00000348264 ARHGAP23Q9P227 1491 aa20.39■□□□□ 0.85
CLCC1-202ENST00000348264 ITGAEP38570 1179 aa20.39■□□□□ 0.85
CLCC1-202ENST00000348264 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
CLCC1-202ENST00000348264 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
CLCC1-202ENST00000348264 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
CLCC1-202ENST00000348264 SCAF11Q99590 1463 aaKnown RBP20.37■□□□□ 0.85
CLCC1-202ENST00000348264 IQGAP3Q86VI3 1631 aa20.36■□□□□ 0.85
CLCC1-202ENST00000348264 ADGRB3O60242 1522 aa20.35■□□□□ 0.85
CLCC1-202ENST00000348264 CPS1P31327 1500 aa20.35■□□□□ 0.85
CLCC1-202ENST00000348264 E9PCH4 1651 aa20.35■□□□□ 0.85
CLCC1-202ENST00000348264 STRCP1A6NGW2 1772 aa20.34■□□□□ 0.85
CLCC1-202ENST00000348264 IDI1Q13907 227 aa20.33■□□□□ 0.85
CLCC1-202ENST00000348264 LTKP29376 864 aa20.32■□□□□ 0.84
CLCC1-202ENST00000348264 TMEM2Q9UHN6 1383 aa20.32■□□□□ 0.84
CLCC1-202ENST00000348264 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
CLCC1-202ENST00000348264 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
CLCC1-202ENST00000348264 TXNDC2Q86VQ3 553 aa20.28■□□□□ 0.84
CLCC1-202ENST00000348264 NUP155O75694 1391 aa20.27■□□□□ 0.84
CLCC1-202ENST00000348264 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
CLCC1-202ENST00000348264 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
CLCC1-202ENST00000348264 UBAP1LF5GYI3 381 aa20.25■□□□□ 0.83
CLCC1-202ENST00000348264 EID1Q9Y6B2 187 aa20.25■□□□□ 0.83
CLCC1-202ENST00000348264 NAIPQ13075 1403 aa20.23■□□□□ 0.83
CLCC1-202ENST00000348264 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
CLCC1-202ENST00000348264 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
CLCC1-202ENST00000348264 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
CLCC1-202ENST00000348264 SPHKAPQ2M3C7 1700 aa20.2■□□□□ 0.82
CLCC1-202ENST00000348264 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
CLCC1-202ENST00000348264 HFM1A2PYH4 1435 aa20.18■□□□□ 0.82
CLCC1-202ENST00000348264 RIMS2Q9UQ26 1411 aa20.17■□□□□ 0.82
CLCC1-202ENST00000348264 SLC26A8Q96RN1 970 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms