RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 EIF2AK4Q9P2K8 1649 aaKnown RBP26.36■■□□□ 1.81
CD55-202ENST00000343420 ABCC5O15440 1437 aa26.35■■□□□ 1.81
CD55-202ENST00000343420 MYO3AQ8NEV4 1616 aa26.35■■□□□ 1.81
CD55-202ENST00000343420 RNF17Q9BXT8 1623 aaKnown RBP26.35■■□□□ 1.81
CD55-202ENST00000343420 SHANK2Q9UPX8 1470 aa26.35■■□□□ 1.81
CD55-202ENST00000343420 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
CD55-202ENST00000343420 WASHC2CQ9Y4E1 1318 aa26.34■■□□□ 1.81
CD55-202ENST00000343420 DNMT1P26358 1616 aaKnown RBP26.32■■□□□ 1.8
CD55-202ENST00000343420 DUOX2Q9NRD8 1548 aa26.32■■□□□ 1.8
CD55-202ENST00000343420 DAPK1P53355 1430 aa26.31■■□□□ 1.8
CD55-202ENST00000343420 NCOA1Q15788 1441 aa26.31■■□□□ 1.8
CD55-202ENST00000343420 CAMSAP1Q5T5Y3 1602 aa26.3■■□□□ 1.8
CD55-202ENST00000343420 PZPP20742 1482 aa26.3■■□□□ 1.8
CD55-202ENST00000343420 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
CD55-202ENST00000343420 FBXO41Q8TF61 875 aa26.29■■□□□ 1.8
CD55-202ENST00000343420 PTPRTO14522 1441 aa26.28■■□□□ 1.8
CD55-202ENST00000343420 KIF15Q9NS87 1388 aa26.27■■□□□ 1.8
CD55-202ENST00000343420 ZC3H13Q5T200 1668 aaKnown RBP26.27■■□□□ 1.8
CD55-202ENST00000343420 FBXO31Q5XUX0 539 aaPredicted RBP26.24■■□□□ 1.79
CD55-202ENST00000343420 MROH1Q8NDA8 1641 aa26.24■■□□□ 1.79
CD55-202ENST00000343420 ABCC3O15438 1527 aa26.24■■□□□ 1.79
CD55-202ENST00000343420 ERBINQ96RT1 1412 aa26.23■■□□□ 1.79
CD55-202ENST00000343420 TNRQ92752 1358 aa26.23■■□□□ 1.79
CD55-202ENST00000343420 RRP7BPQ9NSQ0 103 aa26.23■■□□□ 1.79
CD55-202ENST00000343420 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
CD55-202ENST00000343420 PLA2R1Q13018 1463 aa26.21■■□□□ 1.79
CD55-202ENST00000343420 CERKQ8TCT0 537 aa26.2■■□□□ 1.78
CD55-202ENST00000343420 ANKRD30AQ9BXX3 1397 aa26.2■■□□□ 1.78
CD55-202ENST00000343420 CEP152O94986 1710 aa26.19■■□□□ 1.78
CD55-202ENST00000343420 FAM50AQ14320 339 aaKnown RBP26.18■■□□□ 1.78
CD55-202ENST00000343420 CHIC2Q9UKJ5 165 aa26.18■■□□□ 1.78
CD55-202ENST00000343420 NCKAP5LQ9HCH0 1330 aa26.17■■□□□ 1.78
CD55-202ENST00000343420 PKD2Q13563 968 aa26.17■■□□□ 1.78
CD55-202ENST00000343420 PRDM15P57071 1507 aaPredicted RBP26.16■■□□□ 1.78
CD55-202ENST00000343420 CFAP65Q6ZU64 1925 aaKnown RBP26.15■■□□□ 1.78
CD55-202ENST00000343420 NLRP1Q9C000 1473 aa26.14■■□□□ 1.78
CD55-202ENST00000343420 DEPDC5O75140 1603 aa26.14■■□□□ 1.77
CD55-202ENST00000343420 SPATA31D1Q6ZQQ2 1576 aa26.13■■□□□ 1.77
CD55-202ENST00000343420 ADGRL2O95490 1459 aa26.13■■□□□ 1.77
CD55-202ENST00000343420 ERVK-7P63135 1459 aa26.1■■□□□ 1.77
CD55-202ENST00000343420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.08■■□□□ 1.77
CD55-202ENST00000343420 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.76
CD55-202ENST00000343420 UGGT1Q9NYU2 1555 aa26.07■■□□□ 1.76
CD55-202ENST00000343420 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
CD55-202ENST00000343420 ARHGAP31Q2M1Z3 1444 aa26.07■■□□□ 1.76
CD55-202ENST00000343420 KANK1Q14678 1352 aa26.07■■□□□ 1.76
CD55-202ENST00000343420 THEMISQ8N1K5 641 aaPredicted RBP26.06■■□□□ 1.76
CD55-202ENST00000343420 VWDEQ8N2E2 1590 aa26.03■■□□□ 1.76
CD55-202ENST00000343420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.02■■□□□ 1.764e-6■■□□□ 11.8
CD55-202ENST00000343420 LMTK2Q8IWU2 1503 aa26.01■■□□□ 1.75
CD55-202ENST00000343420 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
CD55-202ENST00000343420 ANKRD50Q9ULJ7 1429 aa26■■□□□ 1.75
CD55-202ENST00000343420 ANKLE2Q86XL3 938 aa26■■□□□ 1.75
CD55-202ENST00000343420 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
CD55-202ENST00000343420 ZNF335Q9H4Z2 1342 aaPredicted RBP25.98■■□□□ 1.75
CD55-202ENST00000343420 IQSEC2Q5JU85 1478 aa25.97■■□□□ 1.75
CD55-202ENST00000343420 UBR1Q8IWV7 1749 aa25.97■■□□□ 1.75
CD55-202ENST00000343420 ROCK1Q13464 1354 aa25.95■■□□□ 1.74
CD55-202ENST00000343420 MED14O60244 1454 aa25.93■■□□□ 1.74
CD55-202ENST00000343420 EFCAB6Q5THR3 1501 aa25.92■■□□□ 1.74
CD55-202ENST00000343420 NPHP4O75161 1426 aaPredicted RBP25.89■■□□□ 1.74
CD55-202ENST00000343420 IQGAP1P46940 1657 aa25.88■■□□□ 1.73
CD55-202ENST00000343420 PIK3C2BO00750 1634 aa25.88■■□□□ 1.73
CD55-202ENST00000343420 UNC13BO14795 1591 aa25.87■■□□□ 1.73
CD55-202ENST00000343420 ITGAEP38570 1179 aa25.87■■□□□ 1.73
CD55-202ENST00000343420 TET3O43151 1660 aa25.86■■□□□ 1.73
CD55-202ENST00000343420 KDM5AP29375 1690 aaKnown RBP25.85■■□□□ 1.73
CD55-202ENST00000343420 NOS1P29475 1434 aa25.85■■□□□ 1.73
CD55-202ENST00000343420 SYNMO15061 1565 aa25.85■■□□□ 1.73
CD55-202ENST00000343420 RPRD2Q5VT52 1461 aaKnown RBP25.85■■□□□ 1.73
CD55-202ENST00000343420 ARHGAP23Q9P227 1491 aa25.85■■□□□ 1.73
CD55-202ENST00000343420 SLIT1O75093 1534 aa25.84■■□□□ 1.73
CD55-202ENST00000343420 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
CD55-202ENST00000343420 RRBP1Q9P2E9 1410 aaKnown RBP25.82■■□□□ 1.72
CD55-202ENST00000343420 IDI1Q13907 227 aa25.82■■□□□ 1.72
CD55-202ENST00000343420 SCAF11Q99590 1463 aaKnown RBP25.82■■□□□ 1.72
CD55-202ENST00000343420 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
CD55-202ENST00000343420 CPS1P31327 1500 aa25.81■■□□□ 1.72
CD55-202ENST00000343420 TXNDC2Q86VQ3 553 aa25.79■■□□□ 1.72
CD55-202ENST00000343420 LTKP29376 864 aa25.78■■□□□ 1.72
CD55-202ENST00000343420 SLC52A1Q9NWF4 448 aa25.78■■□□□ 1.72
CD55-202ENST00000343420 EID1Q9Y6B2 187 aa25.78■■□□□ 1.72
CD55-202ENST00000343420 TMEM2Q9UHN6 1383 aa25.78■■□□□ 1.72
CD55-202ENST00000343420 IQGAP3Q86VI3 1631 aa25.77■■□□□ 1.72
CD55-202ENST00000343420 ADGRB3O60242 1522 aa25.75■■□□□ 1.71
CD55-202ENST00000343420 E9PCH4 1651 aa25.74■■□□□ 1.71
CD55-202ENST00000343420 NUP155O75694 1391 aa25.73■■□□□ 1.71
CD55-202ENST00000343420 UBAP1LF5GYI3 381 aa25.72■■□□□ 1.71
CD55-202ENST00000343420 STRCP1A6NGW2 1772 aa25.71■■□□□ 1.71
CD55-202ENST00000343420 MYO5BQ9ULV0 1848 aa25.69■■□□□ 1.7
CD55-202ENST00000343420 TMEM131LA2VDJ0 1609 aa25.64■■□□□ 1.7
CD55-202ENST00000343420 LRRC7Q96NW7 1537 aa25.63■■□□□ 1.69
CD55-202ENST00000343420 NAIPQ13075 1403 aa25.63■■□□□ 1.69
CD55-202ENST00000343420 TOM1O60784 492 aa25.62■■□□□ 1.69
CD55-202ENST00000343420 ZFYVE9O95405 1425 aa25.59■■□□□ 1.69
CD55-202ENST00000343420 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.69
CD55-202ENST00000343420 RIMS2Q9UQ26 1411 aa25.57■■□□□ 1.68
CD55-202ENST00000343420 CHGAP10645 457 aaKnown RBP25.57■■□□□ 1.68
CD55-202ENST00000343420 SPHKAPQ2M3C7 1700 aa25.57■■□□□ 1.68
CD55-202ENST00000343420 HFM1A2PYH4 1435 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms