RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
UBE2L3-201ENST00000342192 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
UBE2L3-201ENST00000342192 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
UBE2L3-201ENST00000342192 E9PCH4 1651 aa16.79■□□□□ 0.28
UBE2L3-201ENST00000342192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
UBE2L3-201ENST00000342192 ARHGAP5Q13017 1502 aa16.78■□□□□ 0.28
UBE2L3-201ENST00000342192 PLXNC1O60486 1568 aa16.78■□□□□ 0.28
UBE2L3-201ENST00000342192 TRPM1Q7Z4N2 1603 aa16.77■□□□□ 0.28
UBE2L3-201ENST00000342192 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.28
UBE2L3-201ENST00000342192 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.27
UBE2L3-201ENST00000342192 MYO5CQ9NQX4 1742 aa16.76■□□□□ 0.27
UBE2L3-201ENST00000342192 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
UBE2L3-201ENST00000342192 ABCC2Q92887 1545 aa16.75■□□□□ 0.27
UBE2L3-201ENST00000342192 CCDC144AA2RUR9 1427 aa16.75■□□□□ 0.27
UBE2L3-201ENST00000342192 PRAG1Q86YV5 1406 aa16.75■□□□□ 0.27
UBE2L3-201ENST00000342192 IQGAP3Q86VI3 1631 aa16.75■□□□□ 0.27
UBE2L3-201ENST00000342192 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
UBE2L3-201ENST00000342192 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
UBE2L3-201ENST00000342192 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
UBE2L3-201ENST00000342192 KTN1Q86UP2 1357 aaKnown RBP16.72■□□□□ 0.27
UBE2L3-201ENST00000342192 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
UBE2L3-201ENST00000342192 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
UBE2L3-201ENST00000342192 LAMC1P11047 1609 aa16.71■□□□□ 0.27
UBE2L3-201ENST00000342192 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
UBE2L3-201ENST00000342192 MSH5O43196 834 aa16.7■□□□□ 0.26
UBE2L3-201ENST00000342192 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
UBE2L3-201ENST00000342192 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
UBE2L3-201ENST00000342192 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
UBE2L3-201ENST00000342192 A2MP01023 1474 aa16.7■□□□□ 0.26
UBE2L3-201ENST00000342192 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
UBE2L3-201ENST00000342192 GPRASP1Q5JY77 1395 aa16.69■□□□□ 0.26
UBE2L3-201ENST00000342192 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
UBE2L3-201ENST00000342192 LRPPRCP42704 1394 aaKnown RBP16.68■□□□□ 0.26
UBE2L3-201ENST00000342192 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
UBE2L3-201ENST00000342192 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
UBE2L3-201ENST00000342192 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
UBE2L3-201ENST00000342192 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
UBE2L3-201ENST00000342192 RALBP1Q15311 655 aa16.67■□□□□ 0.26
UBE2L3-201ENST00000342192 ERBINQ96RT1 1412 aa16.67■□□□□ 0.26
UBE2L3-201ENST00000342192 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
UBE2L3-201ENST00000342192 ATP10AO60312 1499 aa16.66■□□□□ 0.26
UBE2L3-201ENST00000342192 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
UBE2L3-201ENST00000342192 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
UBE2L3-201ENST00000342192 ZCCHC11Q5TAX3 1644 aaKnown RBP16.64■□□□□ 0.26
UBE2L3-201ENST00000342192 COL17A1Q9UMD9 1497 aaPredicted RBP16.64■□□□□ 0.25
UBE2L3-201ENST00000342192 ABCC1P33527 1531 aa16.63■□□□□ 0.25
UBE2L3-201ENST00000342192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.252e-11■■■□□ 17.3
UBE2L3-201ENST00000342192 PLCH2O75038 1416 aa16.63■□□□□ 0.25
UBE2L3-201ENST00000342192 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
UBE2L3-201ENST00000342192 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
UBE2L3-201ENST00000342192 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
UBE2L3-201ENST00000342192 RNF17Q9BXT8 1623 aaKnown RBP16.61■□□□□ 0.25
UBE2L3-201ENST00000342192 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
UBE2L3-201ENST00000342192 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
UBE2L3-201ENST00000342192 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
UBE2L3-201ENST00000342192 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
UBE2L3-201ENST00000342192 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
UBE2L3-201ENST00000342192 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
UBE2L3-201ENST00000342192 TESK2Q96S53 571 aa16.57■□□□□ 0.24
UBE2L3-201ENST00000342192 EFCAB2Q5VUJ9 269 aa16.56■□□□□ 0.24
UBE2L3-201ENST00000342192 PER1O15534 1290 aaPredicted RBP16.56■□□□□ 0.24
UBE2L3-201ENST00000342192 TRAPPC8Q9Y2L5 1435 aa16.56■□□□□ 0.24
UBE2L3-201ENST00000342192 ARAP3Q8WWN8 1544 aa16.55■□□□□ 0.24
UBE2L3-201ENST00000342192 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
UBE2L3-201ENST00000342192 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
UBE2L3-201ENST00000342192 MADDQ8WXG6 1647 aa16.54■□□□□ 0.24
UBE2L3-201ENST00000342192 ZFYVE16Q7Z3T8 1539 aa16.53■□□□□ 0.24
UBE2L3-201ENST00000342192 TRPM2O94759 1503 aa16.53■□□□□ 0.24
UBE2L3-201ENST00000342192 ZMYM4Q5VZL5 1548 aa16.52■□□□□ 0.24
UBE2L3-201ENST00000342192 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
UBE2L3-201ENST00000342192 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
UBE2L3-201ENST00000342192 DEPDC5O75140 1603 aa16.51■□□□□ 0.23
UBE2L3-201ENST00000342192 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
UBE2L3-201ENST00000342192 INSRP06213 1382 aa16.51■□□□□ 0.23
UBE2L3-201ENST00000342192 CEP152O94986 1710 aa16.51■□□□□ 0.23
UBE2L3-201ENST00000342192 SPHKAPQ2M3C7 1700 aa16.51■□□□□ 0.23
UBE2L3-201ENST00000342192 TMF1P82094 1093 aa16.5■□□□□ 0.23
UBE2L3-201ENST00000342192 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
UBE2L3-201ENST00000342192 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
UBE2L3-201ENST00000342192 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
UBE2L3-201ENST00000342192 PANK3Q9H999 370 aa16.47■□□□□ 0.23
UBE2L3-201ENST00000342192 TET3O43151 1660 aa16.47■□□□□ 0.23
UBE2L3-201ENST00000342192 PTPRTO14522 1441 aa16.47■□□□□ 0.23
UBE2L3-201ENST00000342192 CLTCL1P53675 1640 aa16.47■□□□□ 0.23
UBE2L3-201ENST00000342192 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.23
UBE2L3-201ENST00000342192 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
UBE2L3-201ENST00000342192 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
UBE2L3-201ENST00000342192 CC2D1BQ5T0F9 858 aaKnown RBP16.45■□□□□ 0.22
UBE2L3-201ENST00000342192 ABCA9Q8IUA7 1624 aa16.45■□□□□ 0.22
UBE2L3-201ENST00000342192 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
UBE2L3-201ENST00000342192 VWDEQ8N2E2 1590 aa16.44■□□□□ 0.22
UBE2L3-201ENST00000342192 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
UBE2L3-201ENST00000342192 RCAN3Q9UKA8 241 aa16.44■□□□□ 0.22
UBE2L3-201ENST00000342192 ATP7AQ04656 1500 aa16.44■□□□□ 0.22
UBE2L3-201ENST00000342192 SYNMO15061 1565 aa16.43■□□□□ 0.22
UBE2L3-201ENST00000342192 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
UBE2L3-201ENST00000342192 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
UBE2L3-201ENST00000342192 NBR1Q14596 966 aa16.42■□□□□ 0.22
UBE2L3-201ENST00000342192 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
UBE2L3-201ENST00000342192 NEURL4Q96JN8 1562 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms