RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 NISCHQ9Y2I1 1504 aa25.76■■□□□ 1.71
UBE2L3-201ENST00000342192 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.12
UBE2L3-201ENST00000342192 ZCCHC6Q5VYS8 1495 aaKnown RBP21.82■■□□□ 1.08
UBE2L3-201ENST00000342192 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.07
UBE2L3-201ENST00000342192 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
UBE2L3-201ENST00000342192 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
UBE2L3-201ENST00000342192 DCAF8L2P0C7V8 631 aa21.11■□□□□ 0.97
UBE2L3-201ENST00000342192 CHIC1Q5VXU3 224 aa20.8■□□□□ 0.92
UBE2L3-201ENST00000342192 MYO15BQ96JP2 1530 aa20.76■□□□□ 0.91
UBE2L3-201ENST00000342192 ABCC9O60706 1549 aa20.61■□□□□ 0.89
UBE2L3-201ENST00000342192 SCRIBQ14160 1630 aa20.5■□□□□ 0.87
UBE2L3-201ENST00000342192 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
UBE2L3-201ENST00000342192 NACADO15069 1562 aa20.31■□□□□ 0.84
UBE2L3-201ENST00000342192 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
UBE2L3-201ENST00000342192 HRCP23327 699 aa20.14■□□□□ 0.82
UBE2L3-201ENST00000342192 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
UBE2L3-201ENST00000342192 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
UBE2L3-201ENST00000342192 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
UBE2L3-201ENST00000342192 MROH2BQ7Z745 1585 aa19.99■□□□□ 0.79
UBE2L3-201ENST00000342192 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
UBE2L3-201ENST00000342192 WIZO95785 1651 aa19.89■□□□□ 0.78
UBE2L3-201ENST00000342192 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
UBE2L3-201ENST00000342192 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
UBE2L3-201ENST00000342192 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
UBE2L3-201ENST00000342192 PELP1Q8IZL8 1130 aaKnown RBP19.7■□□□□ 0.74
UBE2L3-201ENST00000342192 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
UBE2L3-201ENST00000342192 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
UBE2L3-201ENST00000342192 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
UBE2L3-201ENST00000342192 TOP2AP11388 1531 aaKnown RBP19.64■□□□□ 0.73
UBE2L3-201ENST00000342192 PPARGC1BQ86YN6 1023 aaKnown RBP19.63■□□□□ 0.73
UBE2L3-201ENST00000342192 SMARCA2P51531 1590 aa19.51■□□□□ 0.71
UBE2L3-201ENST00000342192 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
UBE2L3-201ENST00000342192 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
UBE2L3-201ENST00000342192 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
UBE2L3-201ENST00000342192 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
UBE2L3-201ENST00000342192 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
UBE2L3-201ENST00000342192 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
UBE2L3-201ENST00000342192 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
UBE2L3-201ENST00000342192 EEA1Q15075 1411 aa19.21■□□□□ 0.67
UBE2L3-201ENST00000342192 SOGA1O94964 1423 aa19.2■□□□□ 0.66
UBE2L3-201ENST00000342192 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
UBE2L3-201ENST00000342192 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
UBE2L3-201ENST00000342192 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
UBE2L3-201ENST00000342192 ATAD2BQ9ULI0 1458 aa19.11■□□□□ 0.65
UBE2L3-201ENST00000342192 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
UBE2L3-201ENST00000342192 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
UBE2L3-201ENST00000342192 MYT1Q01538 1121 aa19.05■□□□□ 0.64
UBE2L3-201ENST00000342192 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
UBE2L3-201ENST00000342192 BAZ1BQ9UIG0 1483 aaKnown RBP19.05■□□□□ 0.64
UBE2L3-201ENST00000342192 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
UBE2L3-201ENST00000342192 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
UBE2L3-201ENST00000342192 KIF21BO75037 1637 aa18.97■□□□□ 0.63
UBE2L3-201ENST00000342192 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
UBE2L3-201ENST00000342192 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
UBE2L3-201ENST00000342192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
UBE2L3-201ENST00000342192 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
UBE2L3-201ENST00000342192 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
UBE2L3-201ENST00000342192 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
UBE2L3-201ENST00000342192 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
UBE2L3-201ENST00000342192 HMGXB3Q12766 1538 aa18.81■□□□□ 0.6
UBE2L3-201ENST00000342192 CLIP1P30622 1438 aa18.79■□□□□ 0.6
UBE2L3-201ENST00000342192 RAPGEF2Q9Y4G8 1499 aa18.77■□□□□ 0.59
UBE2L3-201ENST00000342192 NCAPD3P42695 1498 aa18.75■□□□□ 0.59
UBE2L3-201ENST00000342192 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
UBE2L3-201ENST00000342192 ERICH3Q5RHP9 1530 aa18.67■□□□□ 0.58
UBE2L3-201ENST00000342192 PRXQ9BXM0 1461 aa18.63■□□□□ 0.57
UBE2L3-201ENST00000342192 CUX1P39880 1505 aa18.63■□□□□ 0.57
UBE2L3-201ENST00000342192 CFTRP13569 1480 aa18.6■□□□□ 0.57
UBE2L3-201ENST00000342192 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
UBE2L3-201ENST00000342192 APLP2Q06481 763 aa18.55■□□□□ 0.56
UBE2L3-201ENST00000342192 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
UBE2L3-201ENST00000342192 DIEXFQ68CQ4 756 aaKnown RBP18.52■□□□□ 0.56
UBE2L3-201ENST00000342192 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
UBE2L3-201ENST00000342192 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
UBE2L3-201ENST00000342192 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
UBE2L3-201ENST00000342192 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
UBE2L3-201ENST00000342192 ACIN1Q9UKV3 1341 aaKnown RBP18.37■□□□□ 0.53
UBE2L3-201ENST00000342192 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
UBE2L3-201ENST00000342192 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
UBE2L3-201ENST00000342192 CUX2O14529 1486 aa18.33■□□□□ 0.53
UBE2L3-201ENST00000342192 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
UBE2L3-201ENST00000342192 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
UBE2L3-201ENST00000342192 RRBP1Q9P2E9 1410 aaKnown RBP18.31■□□□□ 0.52
UBE2L3-201ENST00000342192 IGF1RP08069 1367 aa18.29■□□□□ 0.52
UBE2L3-201ENST00000342192 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
UBE2L3-201ENST00000342192 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
UBE2L3-201ENST00000342192 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.52
UBE2L3-201ENST00000342192 CC2D2AQ9P2K1 1620 aa18.27■□□□□ 0.52
UBE2L3-201ENST00000342192 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
UBE2L3-201ENST00000342192 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
UBE2L3-201ENST00000342192 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
UBE2L3-201ENST00000342192 MAP3K1Q13233 1512 aa18.2■□□□□ 0.5
UBE2L3-201ENST00000342192 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
UBE2L3-201ENST00000342192 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
UBE2L3-201ENST00000342192 TIAM1Q13009 1591 aa18.19■□□□□ 0.5
UBE2L3-201ENST00000342192 DNMBPQ6XZF7 1577 aa18.16■□□□□ 0.5
UBE2L3-201ENST00000342192 ABCA10Q8WWZ4 1543 aa18.11■□□□□ 0.49
UBE2L3-201ENST00000342192 MIER1Q8N108 512 aa18.11■□□□□ 0.49
UBE2L3-201ENST00000342192 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
UBE2L3-201ENST00000342192 CFAP43Q8NDM7 1665 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms