RNA–Protein interactions for RNA: ENST00000342016.7

CIR1-201, Transcript of corepressor interacting with RBPJ, 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIR1, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-201ENST00000342016 CLTCQ00610 1675 aaKnown RBP12.15□□□□□ -0.46
CIR1-201ENST00000342016 PLXNC1O60486 1568 aa12.14□□□□□ -0.47
CIR1-201ENST00000342016 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
CIR1-201ENST00000342016 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
CIR1-201ENST00000342016 A2MP01023 1474 aa12.13□□□□□ -0.47
CIR1-201ENST00000342016 CCDC18Q5T9S5 1454 aa12.13□□□□□ -0.47
CIR1-201ENST00000342016 POLR1AO95602 1720 aaPredicted RBP12.12□□□□□ -0.47
CIR1-201ENST00000342016 APLP2Q06481 763 aa12.12□□□□□ -0.47
CIR1-201ENST00000342016 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
CIR1-201ENST00000342016 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
CIR1-201ENST00000342016 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
CIR1-201ENST00000342016 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
CIR1-201ENST00000342016 NEURL4Q96JN8 1562 aa12.11□□□□□ -0.47
CIR1-201ENST00000342016 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
CIR1-201ENST00000342016 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
CIR1-201ENST00000342016 VWDEQ8N2E2 1590 aa12.1□□□□□ -0.47
CIR1-201ENST00000342016 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
CIR1-201ENST00000342016 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
CIR1-201ENST00000342016 CDC42BPAQ5VT25 1732 aa12.08□□□□□ -0.48
CIR1-201ENST00000342016 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
CIR1-201ENST00000342016 TNRQ92752 1358 aa12.07□□□□□ -0.48
CIR1-201ENST00000342016 MED14O60244 1454 aa12.07□□□□□ -0.48
CIR1-201ENST00000342016 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
CIR1-201ENST00000342016 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
CIR1-201ENST00000342016 SYNMO15061 1565 aa12.06□□□□□ -0.48
CIR1-201ENST00000342016 RNF17Q9BXT8 1623 aaKnown RBP12.06□□□□□ -0.48
CIR1-201ENST00000342016 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
CIR1-201ENST00000342016 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
CIR1-201ENST00000342016 LRRIQ1Q96JM4 1722 aa12.06□□□□□ -0.48
CIR1-201ENST00000342016 GGT6Q6P531 493 aa12.05□□□□□ -0.48
CIR1-201ENST00000342016 NPHP4O75161 1426 aaPredicted RBP12.05□□□□□ -0.48
CIR1-201ENST00000342016 THEMISQ8N1K5 641 aaPredicted RBP12.04□□□□□ -0.48
CIR1-201ENST00000342016 PZPP20742 1482 aa12.04□□□□□ -0.48
CIR1-201ENST00000342016 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
CIR1-201ENST00000342016 GPATCH8Q9UKJ3 1502 aaKnown RBP12.03□□□□□ -0.48
CIR1-201ENST00000342016 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
CIR1-201ENST00000342016 UBTFP17480 764 aaKnown RBP12.03□□□□□ -0.48
CIR1-201ENST00000342016 ZNF777Q9ULD5 760 aaPredicted RBP12.03□□□□□ -0.48
CIR1-201ENST00000342016 LRRC7Q96NW7 1537 aa12.02□□□□□ -0.49
CIR1-201ENST00000342016 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■■■■□ 25
CIR1-201ENST00000342016 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
CIR1-201ENST00000342016 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
CIR1-201ENST00000342016 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
CIR1-201ENST00000342016 IQGAP1P46940 1657 aa12□□□□□ -0.49
CIR1-201ENST00000342016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.99□□□□□ -0.49
CIR1-201ENST00000342016 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
CIR1-201ENST00000342016 UGGT1Q9NYU2 1555 aa11.99□□□□□ -0.49
CIR1-201ENST00000342016 MIA2Q96PC5 1412 aa11.99□□□□□ -0.49
CIR1-201ENST00000342016 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
CIR1-201ENST00000342016 CFDP1Q9UEE9 299 aaPredicted RBP11.98□□□□□ -0.49
CIR1-201ENST00000342016 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
CIR1-201ENST00000342016 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.5
CIR1-201ENST00000342016 FAM135BQ49AJ0 1406 aa11.95□□□□□ -0.5
CIR1-201ENST00000342016 STRCP1A6NGW2 1772 aa11.93□□□□□ -0.5
CIR1-201ENST00000342016 WASHC2CQ9Y4E1 1318 aa11.93□□□□□ -0.5
CIR1-201ENST00000342016 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
CIR1-201ENST00000342016 MBD5Q9P267 1494 aa11.93□□□□□ -0.5
CIR1-201ENST00000342016 KIF3BO15066 747 aa11.92□□□□□ -0.5
CIR1-201ENST00000342016 ZC3H13Q5T200 1668 aaKnown RBP11.91□□□□□ -0.5
CIR1-201ENST00000342016 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
CIR1-201ENST00000342016 SCAF11Q99590 1463 aaKnown RBP11.9□□□□□ -0.5
CIR1-201ENST00000342016 CCDC141Q6ZP82 1450 aa11.89□□□□□ -0.51
CIR1-201ENST00000342016 RSPH4AQ5TD94 716 aa11.88□□□□□ -0.51
CIR1-201ENST00000342016 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
CIR1-201ENST00000342016 TIAM1Q13009 1591 aa11.87□□□□□ -0.51
CIR1-201ENST00000342016 ERVK-7P63135 1459 aa11.87□□□□□ -0.51
CIR1-201ENST00000342016 ARHGAP23Q9P227 1491 aa11.86□□□□□ -0.51
CIR1-201ENST00000342016 SLIT1O75093 1534 aa11.86□□□□□ -0.51
CIR1-201ENST00000342016 ABCC3O15438 1527 aa11.85□□□□□ -0.51
CIR1-201ENST00000342016 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
CIR1-201ENST00000342016 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
CIR1-201ENST00000342016 ZNF644Q9H582 1327 aaPredicted RBP11.84□□□□□ -0.51
CIR1-201ENST00000342016 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
CIR1-201ENST00000342016 XIRP1Q702N8 1843 aaKnown RBP11.84□□□□□ -0.51
CIR1-201ENST00000342016 CEP162Q5TB80 1403 aa11.83□□□□□ -0.51
CIR1-201ENST00000342016 SETD1AO15047 1707 aaKnown RBP11.83□□□□□ -0.52
CIR1-201ENST00000342016 JCADQ9P266 1359 aa11.83□□□□□ -0.52
CIR1-201ENST00000342016 NCOA2Q15596 1464 aa11.82□□□□□ -0.52
CIR1-201ENST00000342016 EID1Q9Y6B2 187 aa11.82□□□□□ -0.52
CIR1-201ENST00000342016 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
CIR1-201ENST00000342016 HAX1O00165 279 aa11.82□□□□□ -0.52
CIR1-201ENST00000342016 TXNDC2Q86VQ3 553 aa11.82□□□□□ -0.52
CIR1-201ENST00000342016 UPF1Q92900 1129 aaKnown RBP eCLIP11.82□□□□□ -0.52
CIR1-201ENST00000342016 EIF2AK4Q9P2K8 1649 aaKnown RBP11.81□□□□□ -0.52
CIR1-201ENST00000342016 ARHGEF5Q12774 1597 aa11.81□□□□□ -0.52
CIR1-201ENST00000342016 CAMSAP2Q08AD1 1489 aa11.81□□□□□ -0.52
CIR1-201ENST00000342016 TMEM94Q12767 1356 aa11.81□□□□□ -0.52
CIR1-201ENST00000342016 ZNF772Q68DY9 489 aaPredicted RBP11.8□□□□□ -0.52
CIR1-201ENST00000342016 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
CIR1-201ENST00000342016 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
CIR1-201ENST00000342016 KCNA6P17658 529 aa11.79□□□□□ -0.52
CIR1-201ENST00000342016 TSPY4P0CV99 314 aa11.78□□□□□ -0.52
CIR1-201ENST00000342016 TSPY10P0CW01 314 aa11.78□□□□□ -0.52
CIR1-201ENST00000342016 LTKP29376 864 aa11.78□□□□□ -0.52
CIR1-201ENST00000342016 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
CIR1-201ENST00000342016 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
CIR1-201ENST00000342016 SPATA31A6Q5VVP1 1343 aa11.78□□□□□ -0.52
CIR1-201ENST00000342016 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
CIR1-201ENST00000342016 MAST1Q9Y2H9 1570 aa11.77□□□□□ -0.52
CIR1-201ENST00000342016 PRDM15P57071 1507 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms