RNA–Protein interactions for RNA: ENST00000342016.7

CIR1-201, Transcript of corepressor interacting with RBPJ, 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CIR1, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-201ENST00000342016 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
CIR1-201ENST00000342016 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
CIR1-201ENST00000342016 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
CIR1-201ENST00000342016 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
CIR1-201ENST00000342016 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
CIR1-201ENST00000342016 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
CIR1-201ENST00000342016 ABCC9O60706 1549 aa17.49■□□□□ 0.39
CIR1-201ENST00000342016 CCDC180Q9P1Z9 1646 aa17.17■□□□□ 0.34
CIR1-201ENST00000342016 FOXD1Q16676 465 aa17.11■□□□□ 0.33
CIR1-201ENST00000342016 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
CIR1-201ENST00000342016 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
CIR1-201ENST00000342016 MSH5O43196 834 aa16.47■□□□□ 0.23
CIR1-201ENST00000342016 NACADO15069 1562 aa16.34■□□□□ 0.21
CIR1-201ENST00000342016 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
CIR1-201ENST00000342016 UNC13AQ9UPW8 1703 aa16.04■□□□□ 0.16
CIR1-201ENST00000342016 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.16
CIR1-201ENST00000342016 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.15
CIR1-201ENST00000342016 DCAF8L2P0C7V8 631 aa15.96■□□□□ 0.14
CIR1-201ENST00000342016 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
CIR1-201ENST00000342016 CECR2Q9BXF3 1484 aa15.86■□□□□ 0.13
CIR1-201ENST00000342016 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
CIR1-201ENST00000342016 CC2D2AQ9P2K1 1620 aa15.8■□□□□ 0.12
CIR1-201ENST00000342016 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
CIR1-201ENST00000342016 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
CIR1-201ENST00000342016 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
CIR1-201ENST00000342016 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
CIR1-201ENST00000342016 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
CIR1-201ENST00000342016 CUX2O14529 1486 aa15.39■□□□□ 0.05
CIR1-201ENST00000342016 PPP6R1Q9UPN7 881 aa15.24■□□□□ 0.03
CIR1-201ENST00000342016 ERCC6Q03468 1493 aa15.19■□□□□ 0.02
CIR1-201ENST00000342016 ADRA2BP18089 450 aa15.15■□□□□ 0.02
CIR1-201ENST00000342016 NCAPD3P42695 1498 aa15.07■□□□□ 0
CIR1-201ENST00000342016 PLPPR3Q6T4P5 718 aa15.02□□□□□ -0.01
CIR1-201ENST00000342016 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
CIR1-201ENST00000342016 ATAD2BQ9ULI0 1458 aa14.93□□□□□ -0.02
CIR1-201ENST00000342016 SMARCA2P51531 1590 aa14.91□□□□□ -0.02
CIR1-201ENST00000342016 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
CIR1-201ENST00000342016 NESP48681 1621 aa14.87□□□□□ -0.03
CIR1-201ENST00000342016 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
CIR1-201ENST00000342016 LAMC3Q9Y6N6 1575 aa14.81□□□□□ -0.04
CIR1-201ENST00000342016 SMARCA4P51532 1647 aa14.78□□□□□ -0.04
CIR1-201ENST00000342016 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
CIR1-201ENST00000342016 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
CIR1-201ENST00000342016 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
CIR1-201ENST00000342016 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
CIR1-201ENST00000342016 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
CIR1-201ENST00000342016 CACNB1Q02641 598 aaPredicted RBP14.67□□□□□ -0.06
CIR1-201ENST00000342016 MRC2Q9UBG0 1479 aa14.64□□□□□ -0.07
CIR1-201ENST00000342016 WDR62O43379 1518 aa14.61□□□□□ -0.07
CIR1-201ENST00000342016 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
CIR1-201ENST00000342016 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
CIR1-201ENST00000342016 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
CIR1-201ENST00000342016 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
CIR1-201ENST00000342016 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
CIR1-201ENST00000342016 RIMBP3CA6NJZ7 1639 aa14.38□□□□□ -0.11
CIR1-201ENST00000342016 RIMBP3BA6NNM3 1639 aa14.38□□□□□ -0.11
CIR1-201ENST00000342016 RIMBP3Q9UFD9 1639 aa14.38□□□□□ -0.11
CIR1-201ENST00000342016 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
CIR1-201ENST00000342016 CFTRP13569 1480 aa14.31□□□□□ -0.12
CIR1-201ENST00000342016 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
CIR1-201ENST00000342016 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
CIR1-201ENST00000342016 WIZO95785 1651 aa14.23□□□□□ -0.13
CIR1-201ENST00000342016 IFT140Q96RY7 1462 aa14.23□□□□□ -0.13
CIR1-201ENST00000342016 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
CIR1-201ENST00000342016 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
CIR1-201ENST00000342016 CYB5RLQ6IPT4 315 aa14.16□□□□□ -0.14
CIR1-201ENST00000342016 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
CIR1-201ENST00000342016 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
CIR1-201ENST00000342016 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
CIR1-201ENST00000342016 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
CIR1-201ENST00000342016 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
CIR1-201ENST00000342016 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
CIR1-201ENST00000342016 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
CIR1-201ENST00000342016 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
CIR1-201ENST00000342016 CHD1O14646 1710 aa14.04□□□□□ -0.16
CIR1-201ENST00000342016 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
CIR1-201ENST00000342016 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
CIR1-201ENST00000342016 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
CIR1-201ENST00000342016 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.182e-7■■□□□ 13.4
CIR1-201ENST00000342016 CLASP1Q7Z460 1538 aa13.93□□□□□ -0.18
CIR1-201ENST00000342016 FBLN2P98095 1184 aa13.93□□□□□ -0.18
CIR1-201ENST00000342016 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
CIR1-201ENST00000342016 CCDC88BA6NC98 1476 aa13.91□□□□□ -0.18
CIR1-201ENST00000342016 RNF39Q9H2S5 420 aa13.91□□□□□ -0.18
CIR1-201ENST00000342016 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
CIR1-201ENST00000342016 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
CIR1-201ENST00000342016 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
CIR1-201ENST00000342016 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
CIR1-201ENST00000342016 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
CIR1-201ENST00000342016 SOGA1O94964 1423 aa13.81□□□□□ -0.2
CIR1-201ENST00000342016 DCAF8L1A6NGE4 600 aa13.8□□□□□ -0.2
CIR1-201ENST00000342016 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
CIR1-201ENST00000342016 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
CIR1-201ENST00000342016 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
CIR1-201ENST00000342016 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
CIR1-201ENST00000342016 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
CIR1-201ENST00000342016 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
CIR1-201ENST00000342016 C1QBPQ07021 282 aaKnown RBP13.7□□□□□ -0.22
CIR1-201ENST00000342016 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
CIR1-201ENST00000342016 CUX1P39880 1505 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms