RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 CPS1P31327 1500 aa26.81■■□□□ 1.88
NECTIN1-202ENST00000340882 ALKQ9UM73 1620 aa26.81■■□□□ 1.88
NECTIN1-202ENST00000340882 MBD5Q9P267 1494 aa26.8■■□□□ 1.88
NECTIN1-202ENST00000340882 TOM1O60784 492 aa26.78■■□□□ 1.88
NECTIN1-202ENST00000340882 TIAM1Q13009 1591 aa26.78■■□□□ 1.88
NECTIN1-202ENST00000340882 VWDEQ8N2E2 1590 aa26.78■■□□□ 1.88
NECTIN1-202ENST00000340882 TNRQ92752 1358 aa26.77■■□□□ 1.88
NECTIN1-202ENST00000340882 DHX29Q7Z478 1369 aaKnown RBP26.74■■□□□ 1.87
NECTIN1-202ENST00000340882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.73■■□□□ 1.87
NECTIN1-202ENST00000340882 PZPP20742 1482 aa26.72■■□□□ 1.87
NECTIN1-202ENST00000340882 RTEL1-TNFRSF6BF6WH68 1400 aa26.72■■□□□ 1.87
NECTIN1-202ENST00000340882 MTUS2Q5JR59 1369 aa26.71■■□□□ 1.87
NECTIN1-202ENST00000340882 STRCP1A6NGW2 1772 aa26.71■■□□□ 1.87
NECTIN1-202ENST00000340882 KIF3BO15066 747 aa26.7■■□□□ 1.86
NECTIN1-202ENST00000340882 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.86
NECTIN1-202ENST00000340882 ANKLE2Q86XL3 938 aa26.67■■□□□ 1.86
NECTIN1-202ENST00000340882 DEPDC5O75140 1603 aa26.66■■□□□ 1.86
NECTIN1-202ENST00000340882 MED14O60244 1454 aa26.65■■□□□ 1.86
NECTIN1-202ENST00000340882 NPHP4O75161 1426 aaPredicted RBP26.65■■□□□ 1.86
NECTIN1-202ENST00000340882 UGGT1Q9NYU2 1555 aa26.64■■□□□ 1.86
NECTIN1-202ENST00000340882 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.86
NECTIN1-202ENST00000340882 MIA2Q96PC5 1412 aa26.64■■□□□ 1.85
NECTIN1-202ENST00000340882 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
NECTIN1-202ENST00000340882 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
NECTIN1-202ENST00000340882 EHBP1L1Q8N3D4 1523 aa26.62■■□□□ 1.85
NECTIN1-202ENST00000340882 THEMISQ8N1K5 641 aaPredicted RBP26.62■■□□□ 1.85
NECTIN1-202ENST00000340882 WASHC2CQ9Y4E1 1318 aa26.62■■□□□ 1.85
NECTIN1-202ENST00000340882 FAM135AQ9P2D6 1515 aa26.61■■□□□ 1.85
NECTIN1-202ENST00000340882 NLRP1Q9C000 1473 aa26.61■■□□□ 1.85
NECTIN1-202ENST00000340882 CCDC141Q6ZP82 1450 aa26.59■■□□□ 1.85
NECTIN1-202ENST00000340882 LRRC7Q96NW7 1537 aa26.59■■□□□ 1.85
NECTIN1-202ENST00000340882 CEP162Q5TB80 1403 aa26.57■■□□□ 1.84
NECTIN1-202ENST00000340882 CAMSAP2Q08AD1 1489 aa26.56■■□□□ 1.84
NECTIN1-202ENST00000340882 RNF17Q9BXT8 1623 aaKnown RBP26.54■■□□□ 1.84
NECTIN1-202ENST00000340882 CFAP65Q6ZU64 1925 aaKnown RBP26.53■■□□□ 1.84
NECTIN1-202ENST00000340882 ZC3H13Q5T200 1668 aaKnown RBP26.53■■□□□ 1.84
NECTIN1-202ENST00000340882 SYNMO15061 1565 aa26.51■■□□□ 1.83
NECTIN1-202ENST00000340882 RGS17Q9UGC6 210 aaPredicted RBP26.51■■□□□ 1.83
NECTIN1-202ENST00000340882 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
NECTIN1-202ENST00000340882 NCOA2Q15596 1464 aa26.49■■□□□ 1.83
NECTIN1-202ENST00000340882 ABCC3O15438 1527 aa26.48■■□□□ 1.83
NECTIN1-202ENST00000340882 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
NECTIN1-202ENST00000340882 UBR1Q8IWV7 1749 aa26.46■■□□□ 1.83
NECTIN1-202ENST00000340882 ERVK-7P63135 1459 aa26.44■■□□□ 1.82
NECTIN1-202ENST00000340882 CEP152O94986 1710 aa26.44■■□□□ 1.82
NECTIN1-202ENST00000340882 RSPH4AQ5TD94 716 aa26.43■■□□□ 1.82
NECTIN1-202ENST00000340882 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
NECTIN1-202ENST00000340882 TSPY4P0CV99 314 aa26.37■■□□□ 1.81
NECTIN1-202ENST00000340882 TSPY10P0CW01 314 aa26.37■■□□□ 1.81
NECTIN1-202ENST00000340882 LTKP29376 864 aa26.37■■□□□ 1.81
NECTIN1-202ENST00000340882 SCAF11Q99590 1463 aaKnown RBP26.36■■□□□ 1.81
NECTIN1-202ENST00000340882 MAST1Q9Y2H9 1570 aa26.36■■□□□ 1.81
NECTIN1-202ENST00000340882 EIF2AK4Q9P2K8 1649 aaKnown RBP26.36■■□□□ 1.81
NECTIN1-202ENST00000340882 ARHGAP23Q9P227 1491 aa26.34■■□□□ 1.81
NECTIN1-202ENST00000340882 SLIT1O75093 1534 aa26.32■■□□□ 1.8
NECTIN1-202ENST00000340882 POTEAQ6S8J7 498 aa26.3■■□□□ 1.8
NECTIN1-202ENST00000340882 TXNDC2Q86VQ3 553 aa26.3■■□□□ 1.8
NECTIN1-202ENST00000340882 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
NECTIN1-202ENST00000340882 FAM135BQ49AJ0 1406 aa26.25■■□□□ 1.79
NECTIN1-202ENST00000340882 ROBO1Q9Y6N7 1651 aa26.23■■□□□ 1.79
NECTIN1-202ENST00000340882 SETD1AO15047 1707 aaKnown RBP26.21■■□□□ 1.79
NECTIN1-202ENST00000340882 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.78
NECTIN1-202ENST00000340882 TMEM94Q12767 1356 aa26.2■■□□□ 1.78
NECTIN1-202ENST00000340882 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
NECTIN1-202ENST00000340882 RBM33Q96EV2 1170 aaKnown RBP26.19■■□□□ 1.78
NECTIN1-202ENST00000340882 ARHGAP31Q2M1Z3 1444 aa26.19■■□□□ 1.78
NECTIN1-202ENST00000340882 PRDM15P57071 1507 aaPredicted RBP26.19■■□□□ 1.78
NECTIN1-202ENST00000340882 MAP3K1Q13233 1512 aa26.19■■□□□ 1.78
NECTIN1-202ENST00000340882 EID1Q9Y6B2 187 aa26.17■■□□□ 1.78
NECTIN1-202ENST00000340882 TMEM2Q9UHN6 1383 aa26.17■■□□□ 1.78
NECTIN1-202ENST00000340882 TET3O43151 1660 aa26.14■■□□□ 1.78
NECTIN1-202ENST00000340882 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
NECTIN1-202ENST00000340882 KCNA6P17658 529 aa26.11■■□□□ 1.77
NECTIN1-202ENST00000340882 SLC26A8Q96RN1 970 aa26.11■■□□□ 1.77
NECTIN1-202ENST00000340882 CROCC2H7BZ55 1655 aa26.1■■□□□ 1.77
NECTIN1-202ENST00000340882 KDM5AP29375 1690 aaKnown RBP26.1■■□□□ 1.77
NECTIN1-202ENST00000340882 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.1■■□□□ 1.77
NECTIN1-202ENST00000340882 MYOM3Q5VTT5 1437 aa26.1■■□□□ 1.77
NECTIN1-202ENST00000340882 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
NECTIN1-202ENST00000340882 KIF15Q9NS87 1388 aa26.09■■□□□ 1.77
NECTIN1-202ENST00000340882 PROSER2Q86WR7 435 aaPredicted RBP26.09■■□□□ 1.77
NECTIN1-202ENST00000340882 IDI1Q13907 227 aa26.08■■□□□ 1.77
NECTIN1-202ENST00000340882 PHLPP1O60346 1717 aa26.08■■□□□ 1.76
NECTIN1-202ENST00000340882 RRP7BPQ9NSQ0 103 aa26.07■■□□□ 1.76
NECTIN1-202ENST00000340882 ERBINQ96RT1 1412 aa26.06■■□□□ 1.76
NECTIN1-202ENST00000340882 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
NECTIN1-202ENST00000340882 NWD1Q149M9 1564 aa26.06■■□□□ 1.76
NECTIN1-202ENST00000340882 ABCC5O15440 1437 aa26.05■■□□□ 1.76
NECTIN1-202ENST00000340882 VPS8Q8N3P4 1428 aa26.04■■□□□ 1.76
NECTIN1-202ENST00000340882 NKTRP30414 1462 aaKnown RBP26.01■■□□□ 1.75
NECTIN1-202ENST00000340882 LMTK2Q8IWU2 1503 aa25.99■■□□□ 1.75
NECTIN1-202ENST00000340882 MYO5BQ9ULV0 1848 aa25.99■■□□□ 1.75
NECTIN1-202ENST00000340882 ADGRB3O60242 1522 aa25.98■■□□□ 1.75
NECTIN1-202ENST00000340882 CHD2O14647 1828 aaKnown RBP25.98■■□□□ 1.75
NECTIN1-202ENST00000340882 SLAIN2Q9P270 581 aa25.98■■□□□ 1.75
NECTIN1-202ENST00000340882 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
NECTIN1-202ENST00000340882 PTPN23Q9H3S7 1636 aa25.97■■□□□ 1.75
NECTIN1-202ENST00000340882 MSH6P52701 1360 aa25.96■■□□□ 1.75
NECTIN1-202ENST00000340882 JCADQ9P266 1359 aa25.96■■□□□ 1.75
NECTIN1-202ENST00000340882 NOS1P29475 1434 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms