RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ZBTB47Q9UFB7 747 aaPredicted RBP21.95■■□□□ 1.1
CDC42EP4-201ENST00000335793 RCAN3Q9UKA8 241 aa21.94■■□□□ 1.1
CDC42EP4-201ENST00000335793 EXOC6Q8TAG9 804 aa21.93■■□□□ 1.1
CDC42EP4-201ENST00000335793 KIF14Q15058 1648 aa21.93■■□□□ 1.1
CDC42EP4-201ENST00000335793 NLRP13Q86W25 1043 aa21.92■■□□□ 1.1
CDC42EP4-201ENST00000335793 KTN1Q86UP2 1357 aaKnown RBP21.91■■□□□ 1.1
CDC42EP4-201ENST00000335793 RRP1P56182 461 aaKnown RBP21.88■■□□□ 1.09
CDC42EP4-201ENST00000335793 CDCA7LQ96GN5 454 aa21.88■■□□□ 1.09
CDC42EP4-201ENST00000335793 CCDC144AA2RUR9 1427 aa21.88■■□□□ 1.09
CDC42EP4-201ENST00000335793 PLIN1O60240 522 aa21.87■■□□□ 1.09
CDC42EP4-201ENST00000335793 BRPF3Q9ULD4 1205 aa21.87■■□□□ 1.09
CDC42EP4-201ENST00000335793 LAS1LQ9Y4W2 734 aaKnown RBP21.87■■□□□ 1.09
CDC42EP4-201ENST00000335793 SYNJ2O15056 1496 aa21.87■■□□□ 1.09
CDC42EP4-201ENST00000335793 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-201ENST00000335793 BCORL1Q5H9F3 1711 aa21.86■■□□□ 1.09
CDC42EP4-201ENST00000335793 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP4-201ENST00000335793 PANK3Q9H999 370 aa21.86■■□□□ 1.09
CDC42EP4-201ENST00000335793 PTPRGP23470 1445 aa21.86■■□□□ 1.09
CDC42EP4-201ENST00000335793 ATP10BO94823 1461 aa21.84■■□□□ 1.09
CDC42EP4-201ENST00000335793 ITSN2Q9NZM3 1697 aa21.84■■□□□ 1.09
CDC42EP4-201ENST00000335793 ADGRL2O95490 1459 aa21.83■■□□□ 1.09
CDC42EP4-201ENST00000335793 IPO9Q96P70 1041 aaKnown RBP21.83■■□□□ 1.08
CDC42EP4-201ENST00000335793 RALGAPBQ86X10 1494 aa21.82■■□□□ 1.08
CDC42EP4-201ENST00000335793 MBD5Q9P267 1494 aa21.82■■□□□ 1.08
CDC42EP4-201ENST00000335793 TMF1P82094 1093 aa21.81■■□□□ 1.08
CDC42EP4-201ENST00000335793 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
CDC42EP4-201ENST00000335793 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
CDC42EP4-201ENST00000335793 RNF123Q5XPI4 1314 aa21.78■■□□□ 1.08
CDC42EP4-201ENST00000335793 KDM5CP41229 1560 aa21.78■■□□□ 1.08
CDC42EP4-201ENST00000335793 UHRF1BP1Q6BDS2 1440 aa21.78■■□□□ 1.08
CDC42EP4-201ENST00000335793 WDR43Q15061 677 aaKnown RBP eCLIP21.76■■□□□ 1.07
CDC42EP4-201ENST00000335793 PODXL2Q9NZ53 605 aa21.76■■□□□ 1.07
CDC42EP4-201ENST00000335793 KNSTRNQ9Y448 316 aa21.76■■□□□ 1.07
CDC42EP4-201ENST00000335793 NEFMP07197 916 aa21.75■■□□□ 1.07
CDC42EP4-201ENST00000335793 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
CDC42EP4-201ENST00000335793 ADGBQ8N7X0 1667 aa21.75■■□□□ 1.07
CDC42EP4-201ENST00000335793 PDE3BQ13370 1112 aa21.75■■□□□ 1.07
CDC42EP4-201ENST00000335793 VSIG10Q8N0Z9 540 aa21.73■■□□□ 1.07
CDC42EP4-201ENST00000335793 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
CDC42EP4-201ENST00000335793 SKAP1Q86WV1 359 aa21.72■■□□□ 1.07
CDC42EP4-201ENST00000335793 PDE4AP27815 886 aa21.71■■□□□ 1.07
CDC42EP4-201ENST00000335793 TCERG1O14776 1098 aaKnown RBP21.71■■□□□ 1.07
CDC42EP4-201ENST00000335793 PER1O15534 1290 aaPredicted RBP21.7■■□□□ 1.06
CDC42EP4-201ENST00000335793 CRBNQ96SW2 442 aa21.7■■□□□ 1.06
CDC42EP4-201ENST00000335793 CCDC141Q6ZP82 1450 aa21.69■■□□□ 1.06
CDC42EP4-201ENST00000335793 ABCC10Q5T3U5 1492 aa21.69■■□□□ 1.06
CDC42EP4-201ENST00000335793 ADAMTS8Q9UP79 889 aa21.68■■□□□ 1.06
CDC42EP4-201ENST00000335793 DISP3Q9P2K9 1392 aa21.68■■□□□ 1.06
CDC42EP4-201ENST00000335793 NUP160Q12769 1436 aa21.68■■□□□ 1.06
CDC42EP4-201ENST00000335793 ARHGEF12Q9NZN5 1544 aa21.67■■□□□ 1.06
CDC42EP4-201ENST00000335793 POLR1AO95602 1720 aaPredicted RBP21.67■■□□□ 1.06
CDC42EP4-201ENST00000335793 PRAG1Q86YV5 1406 aa21.66■■□□□ 1.06
CDC42EP4-201ENST00000335793 DAXXQ9UER7 740 aaPredicted RBP21.66■■□□□ 1.06
CDC42EP4-201ENST00000335793 SHANK2Q9UPX8 1470 aa21.66■■□□□ 1.06
CDC42EP4-201ENST00000335793 ARHGAP5Q13017 1502 aa21.66■■□□□ 1.06
CDC42EP4-201ENST00000335793 FAM135AQ9P2D6 1515 aa21.65■■□□□ 1.06
CDC42EP4-201ENST00000335793 TESK2Q96S53 571 aa21.65■■□□□ 1.06
CDC42EP4-201ENST00000335793 PARD3Q8TEW0 1356 aa21.64■■□□□ 1.06
CDC42EP4-201ENST00000335793 CDC42BPAQ5VT25 1732 aa21.63■■□□□ 1.05
CDC42EP4-201ENST00000335793 PLEKHH2Q8IVE3 1493 aa21.63■■□□□ 1.05
CDC42EP4-201ENST00000335793 EFCAB2Q5VUJ9 269 aa21.62■■□□□ 1.05
CDC42EP4-201ENST00000335793 ZMYND15Q9H091 742 aa21.62■■□□□ 1.05
CDC42EP4-201ENST00000335793 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
CDC42EP4-201ENST00000335793 ERBINQ96RT1 1412 aa21.61■■□□□ 1.05
CDC42EP4-201ENST00000335793 CROCC2H7BZ55 1655 aa21.6■■□□□ 1.05
CDC42EP4-201ENST00000335793 C20orf194Q5TEA3 1177 aa21.6■■□□□ 1.05
CDC42EP4-201ENST00000335793 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
CDC42EP4-201ENST00000335793 ADCY10Q96PN6 1610 aa21.59■■□□□ 1.05
CDC42EP4-201ENST00000335793 ABCA8O94911 1581 aa21.59■■□□□ 1.05
CDC42EP4-201ENST00000335793 CHGAP10645 457 aaKnown RBP21.58■■□□□ 1.05
CDC42EP4-201ENST00000335793 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.04
CDC42EP4-201ENST00000335793 AFAP1Q8N556 730 aa21.57■■□□□ 1.04
CDC42EP4-201ENST00000335793 BACH2Q9BYV9 841 aa21.57■■□□□ 1.04
CDC42EP4-201ENST00000335793 SYCP2Q9BX26 1530 aa21.57■■□□□ 1.04
CDC42EP4-201ENST00000335793 RGS3P49796 1198 aa21.56■■□□□ 1.04
CDC42EP4-201ENST00000335793 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
CDC42EP4-201ENST00000335793 CHD1O14646 1710 aa21.56■■□□□ 1.04
CDC42EP4-201ENST00000335793 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
CDC42EP4-201ENST00000335793 A2MP01023 1474 aa21.55■■□□□ 1.04
CDC42EP4-201ENST00000335793 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
CDC42EP4-201ENST00000335793 GOLGA2Q08379 1002 aa21.54■■□□□ 1.04
CDC42EP4-201ENST00000335793 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
CDC42EP4-201ENST00000335793 MS4A1P11836 297 aa21.52■■□□□ 1.04
CDC42EP4-201ENST00000335793 PLA2R1Q13018 1463 aa21.52■■□□□ 1.04
CDC42EP4-201ENST00000335793 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
CDC42EP4-201ENST00000335793 TNNT2P45379 298 aaPredicted RBP21.51■■□□□ 1.03
CDC42EP4-201ENST00000335793 SLC4A3P48751 1232 aa21.51■■□□□ 1.03
CDC42EP4-201ENST00000335793 NEUROD2Q15784 382 aa21.51■■□□□ 1.03
CDC42EP4-201ENST00000335793 SAMD9LQ8IVG5 1584 aa21.5■■□□□ 1.03
CDC42EP4-201ENST00000335793 A0A0U1RQG5 324 aaPredicted RBP21.5■■□□□ 1.03
CDC42EP4-201ENST00000335793 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
CDC42EP4-201ENST00000335793 APAF1O14727 1248 aa21.49■■□□□ 1.03
CDC42EP4-201ENST00000335793 KIF3BO15066 747 aa21.49■■□□□ 1.03
CDC42EP4-201ENST00000335793 GLIPR1L2Q4G1C9 344 aa21.49■■□□□ 1.03
CDC42EP4-201ENST00000335793 COL17A1Q9UMD9 1497 aaPredicted RBP21.48■■□□□ 1.03
CDC42EP4-201ENST00000335793 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
CDC42EP4-201ENST00000335793 GPRASP1Q5JY77 1395 aa21.47■■□□□ 1.03
CDC42EP4-201ENST00000335793 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
CDC42EP4-201ENST00000335793 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.02
CDC42EP4-201ENST00000335793 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms