RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 RCAN3Q9UKA8 241 aa31.52■■■□□ 2.64
TSKU-201ENST00000333090 CARMIL2Q6F5E8 1435 aa31.51■■■□□ 2.63
TSKU-201ENST00000333090 PLEKHD1A6NEE1 506 aa31.49■■■□□ 2.63
TSKU-201ENST00000333090 DCAF11Q8TEB1 546 aa31.49■■■□□ 2.63
TSKU-201ENST00000333090 KTN1Q86UP2 1357 aaKnown RBP31.48■■■□□ 2.63
TSKU-201ENST00000333090 NUP160Q12769 1436 aa31.47■■■□□ 2.63
TSKU-201ENST00000333090 CROCC2H7BZ55 1655 aa31.47■■■□□ 2.63
TSKU-201ENST00000333090 TCERG1O14776 1098 aaKnown RBP31.46■■■□□ 2.63
TSKU-201ENST00000333090 ARHGEF12Q9NZN5 1544 aa31.45■■■□□ 2.62
TSKU-201ENST00000333090 HNRNPMP52272 730 aaKnown RBP eCLIP31.44■■■□□ 2.623e-6■■■■□ 20.5
TSKU-201ENST00000333090 PDE4AP27815 886 aa31.41■■■□□ 2.62
TSKU-201ENST00000333090 NLRP13Q86W25 1043 aa31.41■■■□□ 2.62
TSKU-201ENST00000333090 ATP10BO94823 1461 aa31.41■■■□□ 2.62
TSKU-201ENST00000333090 C9orf84Q5VXU9 1444 aa31.37■■■□□ 2.61
TSKU-201ENST00000333090 PDE3BQ13370 1112 aa31.36■■■□□ 2.61
TSKU-201ENST00000333090 CDCA7LQ96GN5 454 aa31.35■■■□□ 2.61
TSKU-201ENST00000333090 ADCY10Q96PN6 1610 aa31.35■■■□□ 2.61
TSKU-201ENST00000333090 TSPY4P0CV99 314 aa31.34■■■□□ 2.61
TSKU-201ENST00000333090 TSPY10P0CW01 314 aa31.34■■■□□ 2.61
TSKU-201ENST00000333090 BACH2Q9BYV9 841 aa31.34■■■□□ 2.61
TSKU-201ENST00000333090 LAS1LQ9Y4W2 734 aaKnown RBP31.34■■■□□ 2.61
TSKU-201ENST00000333090 E9PCH4 1651 aa31.33■■■□□ 2.61
TSKU-201ENST00000333090 PARD3Q8TEW0 1356 aa31.32■■■□□ 2.61
TSKU-201ENST00000333090 PLIN1O60240 522 aa31.29■■■□□ 2.6
TSKU-201ENST00000333090 MS4A1P11836 297 aa31.29■■■□□ 2.6
TSKU-201ENST00000333090 ABCA8O94911 1581 aa31.28■■■□□ 2.6
TSKU-201ENST00000333090 SHANK2Q9UPX8 1470 aa31.27■■■□□ 2.6
TSKU-201ENST00000333090 NEFMP07197 916 aa31.27■■■□□ 2.6
TSKU-201ENST00000333090 PTPRGP23470 1445 aa31.26■■■□□ 2.59
TSKU-201ENST00000333090 KDM5DQ9BY66 1539 aa31.26■■■□□ 2.59
TSKU-201ENST00000333090 ABCC10Q5T3U5 1492 aa31.26■■■□□ 2.59
TSKU-201ENST00000333090 CDC42BPAQ5VT25 1732 aa31.25■■■□□ 2.59
TSKU-201ENST00000333090 CC2D1BQ5T0F9 858 aaKnown RBP31.25■■■□□ 2.59
TSKU-201ENST00000333090 PER1O15534 1290 aaPredicted RBP31.24■■■□□ 2.59
TSKU-201ENST00000333090 RGL3Q3MIN7 710 aa31.22■■■□□ 2.59
TSKU-201ENST00000333090 NBPF1Q3BBV0 1214 aa31.22■■■□□ 2.59
TSKU-201ENST00000333090 SKAP1Q86WV1 359 aa31.21■■■□□ 2.59
TSKU-201ENST00000333090 CRBNQ96SW2 442 aa31.19■■■□□ 2.58
TSKU-201ENST00000333090 PRAG1Q86YV5 1406 aa31.18■■■□□ 2.58
TSKU-201ENST00000333090 USP35Q9P2H5 1018 aa31.16■■■□□ 2.58
TSKU-201ENST00000333090 CCDC144AA2RUR9 1427 aa31.15■■■□□ 2.58
TSKU-201ENST00000333090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.14■■■□□ 2.58
TSKU-201ENST00000333090 IL27Q8NEV9 243 aa31.13■■■□□ 2.57
TSKU-201ENST00000333090 TRPM1Q7Z4N2 1603 aa31.12■■■□□ 2.57
TSKU-201ENST00000333090 PPM1GO15355 546 aaPredicted RBP31.12■■■□□ 2.57
TSKU-201ENST00000333090 PANK3Q9H999 370 aa31.12■■■□□ 2.57
TSKU-201ENST00000333090 FAM135AQ9P2D6 1515 aa31.12■■■□□ 2.57
TSKU-201ENST00000333090 DISP3Q9P2K9 1392 aa31.11■■■□□ 2.57
TSKU-201ENST00000333090 BLMP54132 1417 aaPredicted RBP31.1■■■□□ 2.57
TSKU-201ENST00000333090 WASHC2CQ9Y4E1 1318 aa31.09■■■□□ 2.57
TSKU-201ENST00000333090 COL17A1Q9UMD9 1497 aaPredicted RBP31.08■■■□□ 2.57
TSKU-201ENST00000333090 TESK2Q96S53 571 aa31.08■■■□□ 2.57
TSKU-201ENST00000333090 C20orf194Q5TEA3 1177 aa31.06■■■□□ 2.56
TSKU-201ENST00000333090 ERCC6L2Q5T890 1561 aa31.06■■■□□ 2.56
TSKU-201ENST00000333090 DDRGK1Q96HY6 314 aa31.06■■■□□ 2.56
TSKU-201ENST00000333090 GPRASP1Q5JY77 1395 aa31.05■■■□□ 2.56
TSKU-201ENST00000333090 INSRP06213 1382 aa31.03■■■□□ 2.56
TSKU-201ENST00000333090 RTN4Q9NQC3 1192 aaKnown RBP31.02■■■□□ 2.56
TSKU-201ENST00000333090 SAMD9LQ8IVG5 1584 aa31.01■■■□□ 2.55
TSKU-201ENST00000333090 A2MP01023 1474 aa31.01■■■□□ 2.55
TSKU-201ENST00000333090 ARHGEF5Q12774 1597 aa31.01■■■□□ 2.55
TSKU-201ENST00000333090 ERBINQ96RT1 1412 aa31■■■□□ 2.55
TSKU-201ENST00000333090 ADAMTS8Q9UP79 889 aa31■■■□□ 2.55
TSKU-201ENST00000333090 CHD1O14646 1710 aa31■■■□□ 2.55
TSKU-201ENST00000333090 TMF1P82094 1093 aa30.99■■■□□ 2.55
TSKU-201ENST00000333090 CCDC141Q6ZP82 1450 aa30.99■■■□□ 2.55
TSKU-201ENST00000333090 ZMYM4Q5VZL5 1548 aa30.99■■■□□ 2.55
TSKU-201ENST00000333090 PLEKHH2Q8IVE3 1493 aa30.98■■■□□ 2.55
TSKU-201ENST00000333090 PLA2R1Q13018 1463 aa30.97■■■□□ 2.55
TSKU-201ENST00000333090 CDC42BPBQ9Y5S2 1711 aa30.96■■■□□ 2.55
TSKU-201ENST00000333090 PRDM15P57071 1507 aaPredicted RBP30.96■■■□□ 2.55
TSKU-201ENST00000333090 SLC4A3P48751 1232 aa30.95■■■□□ 2.55
TSKU-201ENST00000333090 SYCP2Q9BX26 1530 aa30.95■■■□□ 2.54
TSKU-201ENST00000333090 KDM2BQ8NHM5 1336 aa30.94■■■□□ 2.54
TSKU-201ENST00000333090 ANO8Q9HCE9 1232 aaPredicted RBP30.94■■■□□ 2.54
TSKU-201ENST00000333090 TTC37Q6PGP7 1564 aa30.93■■■□□ 2.54
TSKU-201ENST00000333090 ARHGAP5Q13017 1502 aa30.92■■■□□ 2.54
TSKU-201ENST00000333090 CENPQQ7L2Z9 268 aaPredicted RBP30.9■■■□□ 2.54
TSKU-201ENST00000333090 DAXXQ9UER7 740 aaPredicted RBP30.9■■■□□ 2.54
TSKU-201ENST00000333090 WDR43Q15061 677 aaKnown RBP eCLIP30.89■■■□□ 2.54
TSKU-201ENST00000333090 RSPH4AQ5TD94 716 aa30.89■■■□□ 2.54
TSKU-201ENST00000333090 PLEKHH1Q9ULM0 1364 aa30.88■■■□□ 2.53
TSKU-201ENST00000333090 DUSP27Q5VZP5 1158 aa30.88■■■□□ 2.53
TSKU-201ENST00000333090 LAMC1P11047 1609 aa30.88■■■□□ 2.53
TSKU-201ENST00000333090 NFKBIBQ15653 356 aa30.88■■■□□ 2.53
TSKU-201ENST00000333090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.86■■■□□ 2.53
TSKU-201ENST00000333090 KNSTRNQ9Y448 316 aa30.85■■■□□ 2.53
TSKU-201ENST00000333090 PREX2Q70Z35 1606 aa30.85■■■□□ 2.53
TSKU-201ENST00000333090 PPP2R1AP30153 589 aa30.84■■■□□ 2.53
TSKU-201ENST00000333090 GSE1Q14687 1217 aa30.83■■■□□ 2.53
TSKU-201ENST00000333090 FAM161AQ3B820 660 aa30.83■■■□□ 2.53
TSKU-201ENST00000333090 GOLGA2Q08379 1002 aa30.82■■■□□ 2.52
TSKU-201ENST00000333090 EIF2AK4Q9P2K8 1649 aaKnown RBP30.82■■■□□ 2.52
TSKU-201ENST00000333090 MYO5CQ9NQX4 1742 aa30.81■■■□□ 2.52
TSKU-201ENST00000333090 C8orf34Q49A92 452 aa30.8■■■□□ 2.52
TSKU-201ENST00000333090 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.8■■■□□ 2.52
TSKU-201ENST00000333090 MAGI2Q86UL8 1455 aa30.79■■■□□ 2.52
TSKU-201ENST00000333090 UNC13BO14795 1591 aa30.79■■■□□ 2.52
TSKU-201ENST00000333090 RGS3P49796 1198 aa30.79■■■□□ 2.52
TSKU-201ENST00000333090 ZNF521Q96K83 1311 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms