RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DUOX2Q9NRD8 1548 aa42.64■■■■■ 4.42
ATPAF1-201ENST00000329231 KIF15Q9NS87 1388 aa42.63■■■■■ 4.41
ATPAF1-201ENST00000329231 WASHC2CQ9Y4E1 1318 aa42.62■■■■■ 4.41
ATPAF1-201ENST00000329231 RRP7BPQ9NSQ0 103 aa42.6■■■■■ 4.41
ATPAF1-201ENST00000329231 KDM5DQ9BY66 1539 aa42.6■■■■■ 4.41
ATPAF1-201ENST00000329231 EIF2AK4Q9P2K8 1649 aaKnown RBP42.6■■■■■ 4.41
ATPAF1-201ENST00000329231 PTPRKQ15262 1439 aa42.57■■■■■ 4.41
ATPAF1-201ENST00000329231 ANKRD30AQ9BXX3 1397 aa42.56■■■■■ 4.4
ATPAF1-201ENST00000329231 CHIC2Q9UKJ5 165 aa42.56■■■■■ 4.4
ATPAF1-201ENST00000329231 RNF17Q9BXT8 1623 aaKnown RBP42.55■■■■■ 4.4
ATPAF1-201ENST00000329231 PPARGC1BQ86YN6 1023 aaKnown RBP42.53■■■■■ 4.4
ATPAF1-201ENST00000329231 ERBINQ96RT1 1412 aa42.52■■■■■ 4.4
ATPAF1-201ENST00000329231 NCOA1Q15788 1441 aa42.47■■■■■ 4.39
ATPAF1-201ENST00000329231 PZPP20742 1482 aa42.45■■■■■ 4.39
ATPAF1-201ENST00000329231 ADGRL2O95490 1459 aa42.43■■■■■ 4.38
ATPAF1-201ENST00000329231 ABCC3O15438 1527 aa42.41■■■■■ 4.38
ATPAF1-201ENST00000329231 MROH1Q8NDA8 1641 aa42.4■■■■■ 4.38
ATPAF1-201ENST00000329231 ZC3H13Q5T200 1668 aaKnown RBP42.39■■■■■ 4.38
ATPAF1-201ENST00000329231 FBXO31Q5XUX0 539 aaPredicted RBP42.39■■■■■ 4.38
ATPAF1-201ENST00000329231 MYO3AQ8NEV4 1616 aa42.38■■■■■ 4.37
ATPAF1-201ENST00000329231 DMRT2Q9Y5R5 561 aa42.36■■■■■ 4.37
ATPAF1-201ENST00000329231 TNRQ92752 1358 aa42.35■■■■■ 4.37
ATPAF1-201ENST00000329231 PRDM15P57071 1507 aaPredicted RBP42.32■■■■■ 4.37
ATPAF1-201ENST00000329231 ZNF142P52746 1687 aaPredicted RBP42.31■■■■■ 4.36
ATPAF1-201ENST00000329231 CEP170BQ9Y4F5 1589 aaPredicted RBP42.31■■■■■ 4.36
ATPAF1-201ENST00000329231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.31■■■■■ 4.36
ATPAF1-201ENST00000329231 STRCQ7RTU9 1775 aa42.3■■■■■ 4.36
ATPAF1-201ENST00000329231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.3■■■■■ 4.368e-11■■■□□ 18.6
ATPAF1-201ENST00000329231 KANK1Q14678 1352 aa42.28■■■■■ 4.36
ATPAF1-201ENST00000329231 A2ML1A8K2U0 1454 aa42.26■■■■■ 4.36
ATPAF1-201ENST00000329231 DEPDC5O75140 1603 aa42.26■■■■■ 4.36
ATPAF1-201ENST00000329231 CAMSAP1Q5T5Y3 1602 aa42.26■■■■■ 4.36
ATPAF1-201ENST00000329231 CEP152O94986 1710 aa42.24■■■■■ 4.35
ATPAF1-201ENST00000329231 ANKRD50Q9ULJ7 1429 aa42.23■■■■■ 4.35
ATPAF1-201ENST00000329231 ROCK1Q13464 1354 aa42.21■■■■■ 4.35
ATPAF1-201ENST00000329231 ITGAEP38570 1179 aa42.19■■■■■ 4.34
ATPAF1-201ENST00000329231 PTPRTO14522 1441 aa42.19■■■■■ 4.34
ATPAF1-201ENST00000329231 PLA2R1Q13018 1463 aa42.17■■■■■ 4.34
ATPAF1-201ENST00000329231 NLRP1Q9C000 1473 aa42.17■■■■■ 4.34
ATPAF1-201ENST00000329231 ARHGAP31Q2M1Z3 1444 aa42.17■■■■■ 4.34
ATPAF1-201ENST00000329231 SPATA31D1Q6ZQQ2 1576 aa42.17■■■■■ 4.34
ATPAF1-201ENST00000329231 ERVK-7P63135 1459 aa42.16■■■■■ 4.34
ATPAF1-201ENST00000329231 RRBP1Q9P2E9 1410 aaKnown RBP42.14■■■■■ 4.34
ATPAF1-201ENST00000329231 PKD2Q13563 968 aa42.13■■■■■ 4.33
ATPAF1-201ENST00000329231 VWDEQ8N2E2 1590 aa42.11■■■■■ 4.33
ATPAF1-201ENST00000329231 NCKAP5LQ9HCH0 1330 aa42.11■■■■■ 4.33
ATPAF1-201ENST00000329231 LMTK2Q8IWU2 1503 aa42.1■■■■■ 4.33
ATPAF1-201ENST00000329231 THEMISQ8N1K5 641 aaPredicted RBP42.06■■■■■ 4.32
ATPAF1-201ENST00000329231 ILDR1Q86SU0 546 aaPredicted RBP42.05■■■■■ 4.32
ATPAF1-201ENST00000329231 UGGT1Q9NYU2 1555 aa42.03■■■■■ 4.32
ATPAF1-201ENST00000329231 CFAP65Q6ZU64 1925 aaKnown RBP42.01■■■■■ 4.32
ATPAF1-201ENST00000329231 EFCAB6Q5THR3 1501 aa41.95■■■■■ 4.31
ATPAF1-201ENST00000329231 CERKQ8TCT0 537 aa41.95■■■■■ 4.31
ATPAF1-201ENST00000329231 ANKLE2Q86XL3 938 aa41.93■■■■■ 4.3
ATPAF1-201ENST00000329231 UNC13BO14795 1591 aa41.93■■■■■ 4.3
ATPAF1-201ENST00000329231 FBXO41Q8TF61 875 aa41.92■■■■■ 4.3
ATPAF1-201ENST00000329231 RPRD2Q5VT52 1461 aaKnown RBP41.86■■■■■ 4.29
ATPAF1-201ENST00000329231 POLR1AO95602 1720 aaPredicted RBP41.84■■■■■ 4.29
ATPAF1-201ENST00000329231 NOS1P29475 1434 aa41.84■■■■■ 4.29
ATPAF1-201ENST00000329231 TET3O43151 1660 aa41.84■■■■■ 4.29
ATPAF1-201ENST00000329231 NUP155O75694 1391 aa41.81■■■■■ 4.28
ATPAF1-201ENST00000329231 UBR1Q8IWV7 1749 aa41.81■■■■■ 4.28
ATPAF1-201ENST00000329231 NEURL4Q96JN8 1562 aa41.8■■■■■ 4.28
ATPAF1-201ENST00000329231 IDI1Q13907 227 aa41.78■■■■■ 4.28
ATPAF1-201ENST00000329231 STAG3Q9UJ98 1225 aa41.78■■■■■ 4.28
ATPAF1-201ENST00000329231 IQGAP3Q86VI3 1631 aa41.77■■■■■ 4.28
ATPAF1-201ENST00000329231 LTBP4Q8N2S1 1624 aa41.77■■■■■ 4.28
ATPAF1-201ENST00000329231 SYNMO15061 1565 aa41.76■■■■■ 4.28
ATPAF1-201ENST00000329231 SLC52A1Q9NWF4 448 aa41.76■■■■■ 4.28
ATPAF1-201ENST00000329231 GCC2Q8IWJ2 1684 aa41.76■■■■■ 4.28
ATPAF1-201ENST00000329231 ZNF335Q9H4Z2 1342 aaPredicted RBP41.74■■■■■ 4.27
ATPAF1-201ENST00000329231 MED14O60244 1454 aa41.74■■■■■ 4.27
ATPAF1-201ENST00000329231 PIK3C2BO00750 1634 aa41.74■■■■■ 4.27
ATPAF1-201ENST00000329231 NPHP4O75161 1426 aaPredicted RBP41.73■■■■■ 4.27
ATPAF1-201ENST00000329231 NAIPQ13075 1403 aa41.73■■■■■ 4.27
ATPAF1-201ENST00000329231 SLIT1O75093 1534 aa41.69■■■■■ 4.26
ATPAF1-201ENST00000329231 ARHGAP23Q9P227 1491 aa41.68■■■■■ 4.26
ATPAF1-201ENST00000329231 KDM5AP29375 1690 aaKnown RBP41.67■■■■■ 4.26
ATPAF1-201ENST00000329231 EID1Q9Y6B2 187 aa41.66■■■■■ 4.26
ATPAF1-201ENST00000329231 HFM1A2PYH4 1435 aa41.66■■■■■ 4.26
ATPAF1-201ENST00000329231 SCAF11Q99590 1463 aaKnown RBP41.66■■■■■ 4.26
ATPAF1-201ENST00000329231 TXNDC2Q86VQ3 553 aa41.65■■■■■ 4.26
ATPAF1-201ENST00000329231 TMEM2Q9UHN6 1383 aa41.64■■■■■ 4.26
ATPAF1-201ENST00000329231 E9PCH4 1651 aa41.64■■■■■ 4.26
ATPAF1-201ENST00000329231 LTKP29376 864 aa41.62■■■■■ 4.25
ATPAF1-201ENST00000329231 IQGAP1P46940 1657 aa41.61■■■■■ 4.25
ATPAF1-201ENST00000329231 ADGRB3O60242 1522 aa41.59■■■■■ 4.25
ATPAF1-201ENST00000329231 IQSEC2Q5JU85 1478 aa41.59■■■■■ 4.25
ATPAF1-201ENST00000329231 TRIM52Q96A61 297 aa41.49■■■■■ 4.23
ATPAF1-201ENST00000329231 CPS1P31327 1500 aa41.48■■■■■ 4.23
ATPAF1-201ENST00000329231 CHGAP10645 457 aaKnown RBP41.44■■■■■ 4.22
ATPAF1-201ENST00000329231 TMEM131LA2VDJ0 1609 aa41.43■■■■■ 4.22
ATPAF1-201ENST00000329231 HDGFP51858 240 aaKnown RBP41.42■■■■■ 4.22
ATPAF1-201ENST00000329231 ZFYVE9O95405 1425 aa41.36■■■■■ 4.21
ATPAF1-201ENST00000329231 RIMS2Q9UQ26 1411 aa41.35■■■■■ 4.21
ATPAF1-201ENST00000329231 SPHKAPQ2M3C7 1700 aa41.35■■■■■ 4.21
ATPAF1-201ENST00000329231 MYO5BQ9ULV0 1848 aa41.34■■■■■ 4.21
ATPAF1-201ENST00000329231 SLC4A1APQ9BWU0 796 aaKnown RBP41.34■■■■■ 4.21
ATPAF1-201ENST00000329231 PPP1R15AO75807 674 aaPredicted RBP41.32■■■■■ 4.21
ATPAF1-201ENST00000329231 ABCF1Q8NE71 845 aaKnown RBP eCLIP41.32■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms