RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP42.3■■■■■ 4.368e-11■■■□□ 18.6
ATPAF1-201ENST00000329231 TROVE2P10155 538 aaKnown RBP eCLIP24.67■■□□□ 1.544e-8■■■■■ 72
ATPAF1-201ENST00000329231 DDX3XO00571 662 aaKnown RBP eCLIP28.31■■■□□ 2.125e-8■■■■■ 28.2
ATPAF1-201ENST00000329231 EFTUD2Q15029 972 aaKnown RBP eCLIP26.2■■□□□ 1.783e-6■■■■■ 41.9
ATPAF1-201ENST00000329231 SF3B1O75533 1304 aaKnown RBP eCLIP30.22■■■□□ 2.434e-6■■■■■ 120.3
ATPAF1-201ENST00000329231 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.43■■□□□ 1.345e-6■■■■□ 22.8
Retrieved 6 of 6 RNA–protein pairs in 3.2 ms