RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ST20-MTHFSA0A0A6YYL1 179 aa22.35■■□□□ 1.17
SSH1-201ENST00000326470 EXOC6Q8TAG9 804 aa22.33■■□□□ 1.17
SSH1-201ENST00000326470 RCAN3Q9UKA8 241 aa22.33■■□□□ 1.17
SSH1-201ENST00000326470 NUP155O75694 1391 aa22.32■■□□□ 1.16
SSH1-201ENST00000326470 E9PCH4 1651 aa22.32■■□□□ 1.16
SSH1-201ENST00000326470 PDE3BQ13370 1112 aa22.31■■□□□ 1.16
SSH1-201ENST00000326470 KDM5DQ9BY66 1539 aa22.3■■□□□ 1.16
SSH1-201ENST00000326470 SHANK2Q9UPX8 1470 aa22.28■■□□□ 1.16
SSH1-201ENST00000326470 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
SSH1-201ENST00000326470 MS4A1P11836 297 aa22.27■■□□□ 1.16
SSH1-201ENST00000326470 PDE4AP27815 886 aa22.27■■□□□ 1.16
SSH1-201ENST00000326470 PLB1Q6P1J6 1458 aa22.27■■□□□ 1.16
SSH1-201ENST00000326470 KDM2AQ9Y2K7 1162 aa22.27■■□□□ 1.16
SSH1-201ENST00000326470 PARD3Q8TEW0 1356 aa22.26■■□□□ 1.15
SSH1-201ENST00000326470 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
SSH1-201ENST00000326470 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
SSH1-201ENST00000326470 BACH2Q9BYV9 841 aa22.25■■□□□ 1.15
SSH1-201ENST00000326470 CHD1O14646 1710 aa22.23■■□□□ 1.15
SSH1-201ENST00000326470 PTPRGP23470 1445 aa22.23■■□□□ 1.15
SSH1-201ENST00000326470 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
SSH1-201ENST00000326470 CDC42BPAQ5VT25 1732 aa22.21■■□□□ 1.15
SSH1-201ENST00000326470 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
SSH1-201ENST00000326470 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
SSH1-201ENST00000326470 INSRP06213 1382 aa22.19■■□□□ 1.14
SSH1-201ENST00000326470 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
SSH1-201ENST00000326470 ABCA8O94911 1581 aa22.18■■□□□ 1.14
SSH1-201ENST00000326470 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
SSH1-201ENST00000326470 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
SSH1-201ENST00000326470 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
SSH1-201ENST00000326470 CDCA7LQ96GN5 454 aa22.16■■□□□ 1.14
SSH1-201ENST00000326470 ZMYM4Q5VZL5 1548 aa22.15■■□□□ 1.14
SSH1-201ENST00000326470 WASHC2CQ9Y4E1 1318 aa22.15■■□□□ 1.14
SSH1-201ENST00000326470 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
SSH1-201ENST00000326470 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
SSH1-201ENST00000326470 TRPM1Q7Z4N2 1603 aa22.14■■□□□ 1.13
SSH1-201ENST00000326470 BLMP54132 1417 aaPredicted RBP22.13■■□□□ 1.13
SSH1-201ENST00000326470 NEFMP07197 916 aa22.12■■□□□ 1.13
SSH1-201ENST00000326470 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
SSH1-201ENST00000326470 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
SSH1-201ENST00000326470 LAS1LQ9Y4W2 734 aaKnown RBP22.11■■□□□ 1.13
SSH1-201ENST00000326470 GPRASP1Q5JY77 1395 aa22.1■■□□□ 1.13
SSH1-201ENST00000326470 ARHGEF5Q12774 1597 aa22.09■■□□□ 1.13
SSH1-201ENST00000326470 FAM135AQ9P2D6 1515 aa22.09■■□□□ 1.13
SSH1-201ENST00000326470 COL17A1Q9UMD9 1497 aaPredicted RBP22.09■■□□□ 1.13
SSH1-201ENST00000326470 PLIN1O60240 522 aa22.08■■□□□ 1.13
SSH1-201ENST00000326470 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
SSH1-201ENST00000326470 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
SSH1-201ENST00000326470 CRBNQ96SW2 442 aa22.07■■□□□ 1.12
SSH1-201ENST00000326470 NBPF1Q3BBV0 1214 aa22.07■■□□□ 1.12
SSH1-201ENST00000326470 DDRGK1Q96HY6 314 aa22.07■■□□□ 1.12
SSH1-201ENST00000326470 ATP10BO94823 1461 aa22.07■■□□□ 1.12
SSH1-201ENST00000326470 HNRNPMP52272 730 aaKnown RBP eCLIP22.06■■□□□ 1.12
SSH1-201ENST00000326470 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
SSH1-201ENST00000326470 TESK2Q96S53 571 aa22.05■■□□□ 1.12
SSH1-201ENST00000326470 LAMC1P11047 1609 aa22.05■■□□□ 1.12
SSH1-201ENST00000326470 PRDM15P57071 1507 aaPredicted RBP22.03■■□□□ 1.12
SSH1-201ENST00000326470 DISP3Q9P2K9 1392 aa22.03■■□□□ 1.12
SSH1-201ENST00000326470 PANK3Q9H999 370 aa22.01■■□□□ 1.11
SSH1-201ENST00000326470 A2MP01023 1474 aa22.01■■□□□ 1.11
SSH1-201ENST00000326470 CCDC141Q6ZP82 1450 aa22.01■■□□□ 1.11
SSH1-201ENST00000326470 IL27Q8NEV9 243 aa22■■□□□ 1.11
SSH1-201ENST00000326470 RGL3Q3MIN7 710 aa22■■□□□ 1.11
SSH1-201ENST00000326470 ERBINQ96RT1 1412 aa22■■□□□ 1.11
SSH1-201ENST00000326470 PLA2R1Q13018 1463 aa21.99■■□□□ 1.11
SSH1-201ENST00000326470 CLASP1Q7Z460 1538 aa21.99■■□□□ 1.11
SSH1-201ENST00000326470 KDM2BQ8NHM5 1336 aa21.99■■□□□ 1.11
SSH1-201ENST00000326470 SKAP1Q86WV1 359 aa21.98■■□□□ 1.11
SSH1-201ENST00000326470 RSPH4AQ5TD94 716 aa21.98■■□□□ 1.11
SSH1-201ENST00000326470 TMF1P82094 1093 aa21.96■■□□□ 1.11
SSH1-201ENST00000326470 C20orf194Q5TEA3 1177 aa21.96■■□□□ 1.11
SSH1-201ENST00000326470 SAMD9LQ8IVG5 1584 aa21.95■■□□□ 1.1
SSH1-201ENST00000326470 EIF2AK4Q9P2K8 1649 aaKnown RBP21.94■■□□□ 1.1
SSH1-201ENST00000326470 CENPQQ7L2Z9 268 aaPredicted RBP21.94■■□□□ 1.1
SSH1-201ENST00000326470 ADAMTS8Q9UP79 889 aa21.94■■□□□ 1.1
SSH1-201ENST00000326470 UNC13BO14795 1591 aa21.93■■□□□ 1.1
SSH1-201ENST00000326470 ERCC6L2Q5T890 1561 aa21.92■■□□□ 1.1
SSH1-201ENST00000326470 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
SSH1-201ENST00000326470 DUSP27Q5VZP5 1158 aa21.9■■□□□ 1.1
SSH1-201ENST00000326470 PREX2Q70Z35 1606 aa21.89■■□□□ 1.1
SSH1-201ENST00000326470 CDC42BPBQ9Y5S2 1711 aa21.89■■□□□ 1.09
SSH1-201ENST00000326470 PLEKHH1Q9ULM0 1364 aa21.89■■□□□ 1.09
SSH1-201ENST00000326470 NFKBIBQ15653 356 aa21.88■■□□□ 1.09
SSH1-201ENST00000326470 ANO8Q9HCE9 1232 aaPredicted RBP21.88■■□□□ 1.09
SSH1-201ENST00000326470 GSE1Q14687 1217 aa21.88■■□□□ 1.09
SSH1-201ENST00000326470 FAM161AQ3B820 660 aa21.88■■□□□ 1.09
SSH1-201ENST00000326470 MYO5CQ9NQX4 1742 aa21.88■■□□□ 1.09
SSH1-201ENST00000326470 MAST1Q9Y2H9 1570 aa21.87■■□□□ 1.09
SSH1-201ENST00000326470 ZNF521Q96K83 1311 aa21.87■■□□□ 1.09
SSH1-201ENST00000326470 ATP10AO60312 1499 aa21.87■■□□□ 1.09
SSH1-201ENST00000326470 IQGAP3Q86VI3 1631 aa21.86■■□□□ 1.09
SSH1-201ENST00000326470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.09
SSH1-201ENST00000326470 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
SSH1-201ENST00000326470 C8orf34Q49A92 452 aa21.85■■□□□ 1.09
SSH1-201ENST00000326470 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.85■■□□□ 1.09
SSH1-201ENST00000326470 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
SSH1-201ENST00000326470 WDR7Q9Y4E6 1490 aa21.85■■□□□ 1.09
SSH1-201ENST00000326470 WDR43Q15061 677 aaKnown RBP eCLIP21.85■■□□□ 1.09
SSH1-201ENST00000326470 RTN4Q9NQC3 1192 aaKnown RBP21.85■■□□□ 1.09
SSH1-201ENST00000326470 DAXXQ9UER7 740 aaPredicted RBP21.85■■□□□ 1.09
SSH1-201ENST00000326470 GOLGA2Q08379 1002 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms