RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.49■■■□□ 2.15
TTC39C-202ENST00000317571 TRAPPC8Q9Y2L5 1435 aa28.48■■■□□ 2.15
TTC39C-202ENST00000317571 MAGI2Q86UL8 1455 aa28.48■■■□□ 2.15
TTC39C-202ENST00000317571 CARD11Q9BXL7 1154 aa28.48■■■□□ 2.15
TTC39C-202ENST00000317571 CCDC144AA2RUR9 1427 aa28.46■■■□□ 2.15
TTC39C-202ENST00000317571 MRS2Q9HD23 443 aa28.45■■■□□ 2.14
TTC39C-202ENST00000317571 EFCAB2Q5VUJ9 269 aa28.44■■■□□ 2.14
TTC39C-202ENST00000317571 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
TTC39C-202ENST00000317571 TRPM1Q7Z4N2 1603 aa28.44■■■□□ 2.14
TTC39C-202ENST00000317571 ERBINQ96RT1 1412 aa28.43■■■□□ 2.14
TTC39C-202ENST00000317571 PRAG1Q86YV5 1406 aa28.42■■■□□ 2.14
TTC39C-202ENST00000317571 A2MP01023 1474 aa28.41■■■□□ 2.14
TTC39C-202ENST00000317571 FAM9BQ8IZU0 186 aa28.41■■■□□ 2.14
TTC39C-202ENST00000317571 ST20-MTHFSA0A0A6YYL1 179 aa28.4■■■□□ 2.14
TTC39C-202ENST00000317571 ARID4BQ4LE39 1312 aaPredicted RBP28.4■■■□□ 2.14
TTC39C-202ENST00000317571 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
TTC39C-202ENST00000317571 RGL3Q3MIN7 710 aa28.37■■■□□ 2.13
TTC39C-202ENST00000317571 NEFLP07196 543 aa28.36■■■□□ 2.13
TTC39C-202ENST00000317571 MYT1Q01538 1121 aa28.35■■■□□ 2.13
TTC39C-202ENST00000317571 ARAP3Q8WWN8 1544 aa28.35■■■□□ 2.13
TTC39C-202ENST00000317571 ATP10AO60312 1499 aa28.35■■■□□ 2.13
TTC39C-202ENST00000317571 ZFYVE16Q7Z3T8 1539 aa28.34■■■□□ 2.13
TTC39C-202ENST00000317571 CNGB1Q14028 1251 aaPredicted RBP28.34■■■□□ 2.13
TTC39C-202ENST00000317571 TSHZ2Q9NRE2 1034 aa28.33■■■□□ 2.13
TTC39C-202ENST00000317571 WDR7Q9Y4E6 1490 aa28.33■■■□□ 2.13
TTC39C-202ENST00000317571 NBPF1Q3BBV0 1214 aa28.32■■■□□ 2.12
TTC39C-202ENST00000317571 AFAP1Q8N556 730 aa28.32■■■□□ 2.12
TTC39C-202ENST00000317571 E9PCH4 1651 aa28.32■■■□□ 2.12
TTC39C-202ENST00000317571 ABCA9Q8IUA7 1624 aa28.29■■■□□ 2.12
TTC39C-202ENST00000317571 GPRASP1Q5JY77 1395 aa28.28■■■□□ 2.12
TTC39C-202ENST00000317571 SPAG9O60271 1321 aaKnown RBP28.27■■■□□ 2.12
TTC39C-202ENST00000317571 RTEL1-TNFRSF6BF6WH68 1400 aa28.26■■■□□ 2.11
TTC39C-202ENST00000317571 ZBED9Q6R2W3 1325 aa28.26■■■□□ 2.11
TTC39C-202ENST00000317571 PRDM15P57071 1507 aaPredicted RBP28.24■■■□□ 2.11
TTC39C-202ENST00000317571 LAMC1P11047 1609 aa28.24■■■□□ 2.11
TTC39C-202ENST00000317571 FANCAO15360 1455 aa28.22■■■□□ 2.11
TTC39C-202ENST00000317571 INO80Q9ULG1 1556 aaPredicted RBP28.22■■■□□ 2.11
TTC39C-202ENST00000317571 DEPDC5O75140 1603 aa28.22■■■□□ 2.11
TTC39C-202ENST00000317571 IRX6P78412 446 aaPredicted RBP28.21■■■□□ 2.11
TTC39C-202ENST00000317571 ATP7AQ04656 1500 aa28.19■■■□□ 2.1
TTC39C-202ENST00000317571 EIF2AK4Q9P2K8 1649 aaKnown RBP28.18■■■□□ 2.1
TTC39C-202ENST00000317571 RNF17Q9BXT8 1623 aaKnown RBP28.16■■■□□ 2.1
TTC39C-202ENST00000317571 ASXL2Q76L83 1435 aa28.16■■■□□ 2.1
TTC39C-202ENST00000317571 TRPM2O94759 1503 aa28.15■■■□□ 2.1
TTC39C-202ENST00000317571 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
TTC39C-202ENST00000317571 TESK2Q96S53 571 aa28.14■■■□□ 2.1
TTC39C-202ENST00000317571 SPHKAPQ2M3C7 1700 aa28.14■■■□□ 2.09
TTC39C-202ENST00000317571 DISP3Q9P2K9 1392 aa28.13■■■□□ 2.09
TTC39C-202ENST00000317571 ADGRL1O94910 1474 aa28.13■■■□□ 2.09
TTC39C-202ENST00000317571 CLTCL1P53675 1640 aa28.12■■■□□ 2.09
TTC39C-202ENST00000317571 VWDEQ8N2E2 1590 aa28.12■■■□□ 2.09
TTC39C-202ENST00000317571 MADDQ8WXG6 1647 aa28.11■■■□□ 2.09
TTC39C-202ENST00000317571 PNISRQ8TF01 805 aaKnown RBP28.11■■■□□ 2.09
TTC39C-202ENST00000317571 SCAPERQ9BY12 1400 aa28.11■■■□□ 2.09
TTC39C-202ENST00000317571 PTPRTO14522 1441 aa28.11■■■□□ 2.09
TTC39C-202ENST00000317571 CEP152O94986 1710 aa28.1■■■□□ 2.09
TTC39C-202ENST00000317571 TET3O43151 1660 aa28.1■■■□□ 2.09
TTC39C-202ENST00000317571 MROH1Q8NDA8 1641 aa28.09■■■□□ 2.09
TTC39C-202ENST00000317571 SENP3-EIF4A1A0A087X0R7 540 aa28.05■■■□□ 2.08
TTC39C-202ENST00000317571 PER1O15534 1290 aaPredicted RBP28.05■■■□□ 2.08
TTC39C-202ENST00000317571 MYBBP1AQ9BQG0 1328 aaKnown RBP28.04■■■□□ 2.08
TTC39C-202ENST00000317571 KIDINS220Q9ULH0 1771 aa28.03■■■□□ 2.08
TTC39C-202ENST00000317571 TMC1Q8TDI8 760 aa28.03■■■□□ 2.08
TTC39C-202ENST00000317571 LRPPRCP42704 1394 aaKnown RBP28.03■■■□□ 2.08
TTC39C-202ENST00000317571 PARD3Q8TEW0 1356 aa28.02■■■□□ 2.08
TTC39C-202ENST00000317571 IQGAP1P46940 1657 aa28.02■■■□□ 2.08
TTC39C-202ENST00000317571 BRD4O60885 1362 aaPredicted RBP28.01■■■□□ 2.08
TTC39C-202ENST00000317571 KTN1Q86UP2 1357 aaKnown RBP28.01■■■□□ 2.08
TTC39C-202ENST00000317571 KIF3BO15066 747 aa28.01■■■□□ 2.07
TTC39C-202ENST00000317571 RALBP1Q15311 655 aa28.01■■■□□ 2.07
TTC39C-202ENST00000317571 SMG6Q86US8 1419 aaKnown RBP28■■■□□ 2.07
TTC39C-202ENST00000317571 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
TTC39C-202ENST00000317571 MYT1LQ9UL68 1186 aa27.95■■■□□ 2.06
TTC39C-202ENST00000317571 KANK1Q14678 1352 aa27.95■■■□□ 2.06
TTC39C-202ENST00000317571 OSCARQ8IYS5 282 aa27.92■■■□□ 2.06
TTC39C-202ENST00000317571 TMF1P82094 1093 aa27.91■■■□□ 2.06
TTC39C-202ENST00000317571 PANK3Q9H999 370 aa27.91■■■□□ 2.06
TTC39C-202ENST00000317571 PPRC1Q5VV67 1664 aaKnown RBP27.91■■■□□ 2.06
TTC39C-202ENST00000317571 EFCAB6Q5THR3 1501 aa27.91■■■□□ 2.06
TTC39C-202ENST00000317571 ERICH6BQ5W0A0 696 aa27.91■■■□□ 2.06
TTC39C-202ENST00000317571 NUDCQ9Y266 331 aa27.91■■■□□ 2.06
TTC39C-202ENST00000317571 ZNF518AQ6AHZ1 1483 aa27.9■■■□□ 2.06
TTC39C-202ENST00000317571 NLRP13Q86W25 1043 aa27.88■■■□□ 2.05
TTC39C-202ENST00000317571 NEURL4Q96JN8 1562 aa27.87■■■□□ 2.05
TTC39C-202ENST00000317571 CC2D1BQ5T0F9 858 aaKnown RBP27.87■■■□□ 2.05
TTC39C-202ENST00000317571 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
TTC39C-202ENST00000317571 SCAF11Q99590 1463 aaKnown RBP27.86■■■□□ 2.05
TTC39C-202ENST00000317571 MROH2AA6NES4 1674 aa27.86■■■□□ 2.05
TTC39C-202ENST00000317571 FRMPD1Q5SYB0 1578 aa27.86■■■□□ 2.05
TTC39C-202ENST00000317571 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
TTC39C-202ENST00000317571 POGZQ7Z3K3 1410 aa27.84■■■□□ 2.05
TTC39C-202ENST00000317571 KIAA1210Q9ULL0 1709 aa27.83■■■□□ 2.05
TTC39C-202ENST00000317571 RNF123Q5XPI4 1314 aa27.83■■■□□ 2.05
TTC39C-202ENST00000317571 IFT172Q9UG01 1749 aa27.82■■■□□ 2.04
TTC39C-202ENST00000317571 WASHC2CQ9Y4E1 1318 aa27.82■■■□□ 2.04
TTC39C-202ENST00000317571 LMTK2Q8IWU2 1503 aa27.82■■■□□ 2.04
TTC39C-202ENST00000317571 ABCA6Q8N139 1617 aa27.82■■■□□ 2.04
TTC39C-202ENST00000317571 MAP3K4Q9Y6R4 1608 aa27.82■■■□□ 2.04
TTC39C-202ENST00000317571 NPM1P06748 294 aaKnown RBP eCLIP27.81■■■□□ 2.04
TTC39C-202ENST00000317571 RBM19Q9Y4C8 960 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms