RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 KIAA1107Q9UPP5 1409 aa18.79■□□□□ 0.6
EDC3-201ENST00000315127 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
EDC3-201ENST00000315127 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
EDC3-201ENST00000315127 AKNAQ7Z591 1439 aa18.77■□□□□ 0.6
EDC3-201ENST00000315127 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
EDC3-201ENST00000315127 C14orf37Q86TY3 774 aa18.77■□□□□ 0.59
EDC3-201ENST00000315127 PLEKHH2Q8IVE3 1493 aa18.76■□□□□ 0.59
EDC3-201ENST00000315127 NUP160Q12769 1436 aa18.76■□□□□ 0.59
EDC3-201ENST00000315127 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
EDC3-201ENST00000315127 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
EDC3-201ENST00000315127 CDCA8Q53HL2 280 aa18.72■□□□□ 0.59
EDC3-201ENST00000315127 CFAP43Q8NDM7 1665 aa18.72■□□□□ 0.59
EDC3-201ENST00000315127 ROCK1Q13464 1354 aa18.72■□□□□ 0.59
EDC3-201ENST00000315127 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
EDC3-201ENST00000315127 KIF14Q15058 1648 aa18.69■□□□□ 0.58
EDC3-201ENST00000315127 CCDC141Q6ZP82 1450 aa18.68■□□□□ 0.58
EDC3-201ENST00000315127 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
EDC3-201ENST00000315127 MORC1Q86VD1 984 aa18.68■□□□□ 0.58
EDC3-201ENST00000315127 NEFMP07197 916 aa18.67■□□□□ 0.58
EDC3-201ENST00000315127 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
EDC3-201ENST00000315127 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
EDC3-201ENST00000315127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
EDC3-201ENST00000315127 LAS1LQ9Y4W2 734 aaKnown RBP18.64■□□□□ 0.58
EDC3-201ENST00000315127 ERCC6L2Q5T890 1561 aa18.64■□□□□ 0.57
EDC3-201ENST00000315127 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
EDC3-201ENST00000315127 SYCP2Q9BX26 1530 aa18.63■□□□□ 0.57
EDC3-201ENST00000315127 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
EDC3-201ENST00000315127 KDM6BO15054 1643 aa18.62■□□□□ 0.57
EDC3-201ENST00000315127 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
EDC3-201ENST00000315127 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
EDC3-201ENST00000315127 PLIN1O60240 522 aa18.61■□□□□ 0.57
EDC3-201ENST00000315127 NLRP13Q86W25 1043 aa18.61■□□□□ 0.57
EDC3-201ENST00000315127 CABP2Q9NPB3 220 aa18.6■□□□□ 0.57
EDC3-201ENST00000315127 CNTLNQ9NXG0 1405 aa18.6■□□□□ 0.57
EDC3-201ENST00000315127 SLC12A5Q9H2X9 1139 aa18.59■□□□□ 0.57
EDC3-201ENST00000315127 ADGRL1O94910 1474 aa18.58■□□□□ 0.57
EDC3-201ENST00000315127 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.57
EDC3-201ENST00000315127 ADGRF5Q8IZF2 1346 aa18.58■□□□□ 0.56
EDC3-201ENST00000315127 FANCAO15360 1455 aa18.58■□□□□ 0.56
EDC3-201ENST00000315127 RALBP1Q15311 655 aa18.58■□□□□ 0.56
EDC3-201ENST00000315127 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
EDC3-201ENST00000315127 U2AF1L5P0DN76 240 aaPredicted RBP18.57■□□□□ 0.56
EDC3-201ENST00000315127 U2AF1Q01081 240 aaKnown RBP eCLIP18.57■□□□□ 0.56
EDC3-201ENST00000315127 TCOF1Q13428 1488 aaKnown RBP18.56■□□□□ 0.56
EDC3-201ENST00000315127 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
EDC3-201ENST00000315127 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
EDC3-201ENST00000315127 MYBBP1AQ9BQG0 1328 aaKnown RBP18.54■□□□□ 0.56
EDC3-201ENST00000315127 VGFO15240 615 aaPredicted RBP18.54■□□□□ 0.56
EDC3-201ENST00000315127 CFAP53Q96M91 514 aa18.53■□□□□ 0.56
EDC3-201ENST00000315127 PLCH2O75038 1416 aa18.52■□□□□ 0.55
EDC3-201ENST00000315127 GGNBP2Q9H3C7 697 aa18.51■□□□□ 0.55
EDC3-201ENST00000315127 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
EDC3-201ENST00000315127 APAF1O14727 1248 aa18.51■□□□□ 0.55
EDC3-201ENST00000315127 CENPJQ9HC77 1338 aaPredicted RBP18.5■□□□□ 0.55
EDC3-201ENST00000315127 IDI1Q13907 227 aa18.5■□□□□ 0.55
EDC3-201ENST00000315127 PZPP20742 1482 aa18.5■□□□□ 0.55
EDC3-201ENST00000315127 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
EDC3-201ENST00000315127 PPP4R2Q9NY27 417 aa18.49■□□□□ 0.55
EDC3-201ENST00000315127 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
EDC3-201ENST00000315127 RCAN3Q9UKA8 241 aa18.49■□□□□ 0.55
EDC3-201ENST00000315127 NUDCQ9Y266 331 aa18.47■□□□□ 0.55
EDC3-201ENST00000315127 RGS3P49796 1198 aa18.47■□□□□ 0.55
EDC3-201ENST00000315127 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
EDC3-201ENST00000315127 PAK3O75914 559 aaPredicted RBP18.46■□□□□ 0.55
EDC3-201ENST00000315127 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
EDC3-201ENST00000315127 CLUAP1Q96AJ1 413 aa18.45■□□□□ 0.54
EDC3-201ENST00000315127 PRAM1Q96QH2 718 aa18.45■□□□□ 0.54
EDC3-201ENST00000315127 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
EDC3-201ENST00000315127 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
EDC3-201ENST00000315127 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
EDC3-201ENST00000315127 TXNDC2Q86VQ3 553 aa18.44■□□□□ 0.54
EDC3-201ENST00000315127 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
EDC3-201ENST00000315127 TSHZ2Q9NRE2 1034 aa18.43■□□□□ 0.54
EDC3-201ENST00000315127 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
EDC3-201ENST00000315127 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
EDC3-201ENST00000315127 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
EDC3-201ENST00000315127 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
EDC3-201ENST00000315127 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
EDC3-201ENST00000315127 CHD1O14646 1710 aa18.41■□□□□ 0.54
EDC3-201ENST00000315127 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
EDC3-201ENST00000315127 WDR7Q9Y4E6 1490 aa18.4■□□□□ 0.54
EDC3-201ENST00000315127 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
EDC3-201ENST00000315127 FBLN1P23142 703 aa18.4■□□□□ 0.54
EDC3-201ENST00000315127 ELL2O00472 640 aaPredicted RBP18.4■□□□□ 0.54
EDC3-201ENST00000315127 LRRIQ1Q96JM4 1722 aa18.39■□□□□ 0.53
EDC3-201ENST00000315127 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
EDC3-201ENST00000315127 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.39■□□□□ 0.53
EDC3-201ENST00000315127 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
EDC3-201ENST00000315127 NUTM2GQ5VZR2 741 aa18.38■□□□□ 0.53
EDC3-201ENST00000315127 LTV1Q96GA3 475 aaPredicted RBP18.38■□□□□ 0.53
EDC3-201ENST00000315127 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
EDC3-201ENST00000315127 EVC2Q86UK5 1308 aa18.38■□□□□ 0.53
EDC3-201ENST00000315127 MBD5Q9P267 1494 aa18.38■□□□□ 0.53
EDC3-201ENST00000315127 FAM135AQ9P2D6 1515 aa18.37■□□□□ 0.53
EDC3-201ENST00000315127 DHX29Q7Z478 1369 aaKnown RBP18.37■□□□□ 0.53
EDC3-201ENST00000315127 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
EDC3-201ENST00000315127 MTHFSP49914 203 aa18.37■□□□□ 0.53
EDC3-201ENST00000315127 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
EDC3-201ENST00000315127 ABCA8O94911 1581 aa18.37■□□□□ 0.53
EDC3-201ENST00000315127 NBR1Q14596 966 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms