RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 RRP7BPQ9NSQ0 103 aa19.61■□□□□ 0.73
CKS2-201ENST00000314355 KDM5DQ9BY66 1539 aa19.61■□□□□ 0.73
CKS2-201ENST00000314355 NCOA1Q15788 1441 aa19.6■□□□□ 0.73
CKS2-201ENST00000314355 TNRQ92752 1358 aa19.6■□□□□ 0.73
CKS2-201ENST00000314355 THEMISQ8N1K5 641 aaPredicted RBP19.6■□□□□ 0.73
CKS2-201ENST00000314355 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
CKS2-201ENST00000314355 MAST1Q9Y2H9 1570 aa19.59■□□□□ 0.73
CKS2-201ENST00000314355 STRCQ7RTU9 1775 aa19.59■□□□□ 0.73
CKS2-201ENST00000314355 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
CKS2-201ENST00000314355 CHIC2Q9UKJ5 165 aa19.57■□□□□ 0.72
CKS2-201ENST00000314355 PZPP20742 1482 aa19.56■□□□□ 0.72
CKS2-201ENST00000314355 ANKLE2Q86XL3 938 aa19.56■□□□□ 0.72
CKS2-201ENST00000314355 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
CKS2-201ENST00000314355 ANKRD30AQ9BXX3 1397 aa19.56■□□□□ 0.72
CKS2-201ENST00000314355 KIF15Q9NS87 1388 aa19.56■□□□□ 0.72
CKS2-201ENST00000314355 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
CKS2-201ENST00000314355 A2ML1A8K2U0 1454 aa19.55■□□□□ 0.72
CKS2-201ENST00000314355 PTPN23Q9H3S7 1636 aa19.55■□□□□ 0.72
CKS2-201ENST00000314355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.727e-7■■□□□ 12.6
CKS2-201ENST00000314355 CEP170BQ9Y4F5 1589 aaPredicted RBP19.55■□□□□ 0.72
CKS2-201ENST00000314355 KANK1Q14678 1352 aa19.55■□□□□ 0.72
CKS2-201ENST00000314355 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
CKS2-201ENST00000314355 ABCC5O15440 1437 aa19.54■□□□□ 0.72
CKS2-201ENST00000314355 MYO3AQ8NEV4 1616 aa19.53■□□□□ 0.72
CKS2-201ENST00000314355 DAPK1P53355 1430 aa19.52■□□□□ 0.72
CKS2-201ENST00000314355 SHANK2Q9UPX8 1470 aa19.52■□□□□ 0.72
CKS2-201ENST00000314355 EIF2AK4Q9P2K8 1649 aaKnown RBP19.51■□□□□ 0.71
CKS2-201ENST00000314355 ERBINQ96RT1 1412 aa19.5■□□□□ 0.71
CKS2-201ENST00000314355 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
CKS2-201ENST00000314355 TCOF1Q13428 1488 aaKnown RBP19.49■□□□□ 0.71
CKS2-201ENST00000314355 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
CKS2-201ENST00000314355 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
CKS2-201ENST00000314355 DNMT1P26358 1616 aaKnown RBP19.46■□□□□ 0.71
CKS2-201ENST00000314355 RNF17Q9BXT8 1623 aaKnown RBP19.46■□□□□ 0.71
CKS2-201ENST00000314355 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
CKS2-201ENST00000314355 ABCC3O15438 1527 aa19.46■□□□□ 0.71
CKS2-201ENST00000314355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.45■□□□□ 0.79e-14■■□□□ 12.1
CKS2-201ENST00000314355 ZNF335Q9H4Z2 1342 aaPredicted RBP19.45■□□□□ 0.7
CKS2-201ENST00000314355 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
CKS2-201ENST00000314355 EID1Q9Y6B2 187 aa19.41■□□□□ 0.7
CKS2-201ENST00000314355 IQSEC2Q5JU85 1478 aa19.41■□□□□ 0.7
CKS2-201ENST00000314355 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
CKS2-201ENST00000314355 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
CKS2-201ENST00000314355 ARHGAP31Q2M1Z3 1444 aa19.39■□□□□ 0.69
CKS2-201ENST00000314355 ERVK-7P63135 1459 aa19.39■□□□□ 0.69
CKS2-201ENST00000314355 LTBP4Q8N2S1 1624 aa19.39■□□□□ 0.69
CKS2-201ENST00000314355 SPATA31D1Q6ZQQ2 1576 aa19.37■□□□□ 0.69
CKS2-201ENST00000314355 CFAP65Q6ZU64 1925 aaKnown RBP19.36■□□□□ 0.69
CKS2-201ENST00000314355 ITGAEP38570 1179 aa19.36■□□□□ 0.69
CKS2-201ENST00000314355 TXNDC2Q86VQ3 553 aa19.36■□□□□ 0.69
CKS2-201ENST00000314355 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
CKS2-201ENST00000314355 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
CKS2-201ENST00000314355 ANKRD50Q9ULJ7 1429 aa19.35■□□□□ 0.69
CKS2-201ENST00000314355 PRDM15P57071 1507 aaPredicted RBP19.35■□□□□ 0.69
CKS2-201ENST00000314355 CEP152O94986 1710 aa19.34■□□□□ 0.69
CKS2-201ENST00000314355 MROH1Q8NDA8 1641 aa19.34■□□□□ 0.69
CKS2-201ENST00000314355 TOM1O60784 492 aa19.34■□□□□ 0.69
CKS2-201ENST00000314355 ADGRL2O95490 1459 aa19.34■□□□□ 0.69
CKS2-201ENST00000314355 SLC52A1Q9NWF4 448 aa19.32■□□□□ 0.68
CKS2-201ENST00000314355 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
CKS2-201ENST00000314355 HDGFP51858 240 aaKnown RBP19.31■□□□□ 0.68
CKS2-201ENST00000314355 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
CKS2-201ENST00000314355 MED14O60244 1454 aa19.3■□□□□ 0.68
CKS2-201ENST00000314355 IDI1Q13907 227 aa19.3■□□□□ 0.68
CKS2-201ENST00000314355 BCANQ96GW7 911 aa19.29■□□□□ 0.68
CKS2-201ENST00000314355 CPS1P31327 1500 aa19.29■□□□□ 0.68
CKS2-201ENST00000314355 DEPDC5O75140 1603 aa19.28■□□□□ 0.68
CKS2-201ENST00000314355 LMTK2Q8IWU2 1503 aa19.27■□□□□ 0.68
CKS2-201ENST00000314355 ROCK1Q13464 1354 aa19.27■□□□□ 0.68
CKS2-201ENST00000314355 NEURL4Q96JN8 1562 aa19.25■□□□□ 0.67
CKS2-201ENST00000314355 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
CKS2-201ENST00000314355 LTKP29376 864 aa19.25■□□□□ 0.67
CKS2-201ENST00000314355 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
CKS2-201ENST00000314355 TMEM2Q9UHN6 1383 aa19.23■□□□□ 0.67
CKS2-201ENST00000314355 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
CKS2-201ENST00000314355 IQGAP1P46940 1657 aa19.22■□□□□ 0.67
CKS2-201ENST00000314355 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
CKS2-201ENST00000314355 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
CKS2-201ENST00000314355 VWDEQ8N2E2 1590 aa19.21■□□□□ 0.67
CKS2-201ENST00000314355 NUP155O75694 1391 aa19.2■□□□□ 0.66
CKS2-201ENST00000314355 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
CKS2-201ENST00000314355 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
CKS2-201ENST00000314355 SLIT1O75093 1534 aa19.2■□□□□ 0.66
CKS2-201ENST00000314355 EFCAB6Q5THR3 1501 aa19.2■□□□□ 0.66
CKS2-201ENST00000314355 NOS1P29475 1434 aa19.19■□□□□ 0.66
CKS2-201ENST00000314355 ARHGAP23Q9P227 1491 aa19.19■□□□□ 0.66
CKS2-201ENST00000314355 PIK3C2BO00750 1634 aa19.18■□□□□ 0.66
CKS2-201ENST00000314355 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
CKS2-201ENST00000314355 SLC26A8Q96RN1 970 aa19.14■□□□□ 0.65
CKS2-201ENST00000314355 KCNA6P17658 529 aa19.13■□□□□ 0.65
CKS2-201ENST00000314355 TET3O43151 1660 aa19.13■□□□□ 0.65
CKS2-201ENST00000314355 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
CKS2-201ENST00000314355 PROSER2Q86WR7 435 aaPredicted RBP19.12■□□□□ 0.65
CKS2-201ENST00000314355 SYNMO15061 1565 aa19.1■□□□□ 0.65
CKS2-201ENST00000314355 HSPA1LP34931 641 aa19.1■□□□□ 0.65
CKS2-201ENST00000314355 UNC13BO14795 1591 aa19.1■□□□□ 0.65
CKS2-201ENST00000314355 ADGRB3O60242 1522 aa19.1■□□□□ 0.65
CKS2-201ENST00000314355 LRRC7Q96NW7 1537 aa19.1■□□□□ 0.65
CKS2-201ENST00000314355 TRIM52Q96A61 297 aa19.09■□□□□ 0.65
CKS2-201ENST00000314355 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms