RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TSPY10P0CW01 314 aa18.56■□□□□ 0.56
MKS1-201ENST00000313863 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
MKS1-201ENST00000313863 JPH4Q96JJ6 628 aa18.53■□□□□ 0.56
MKS1-201ENST00000313863 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
MKS1-201ENST00000313863 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
MKS1-201ENST00000313863 LAMC1P11047 1609 aa18.51■□□□□ 0.55
MKS1-201ENST00000313863 TRPM1Q7Z4N2 1603 aa18.51■□□□□ 0.55
MKS1-201ENST00000313863 ATP10BO94823 1461 aa18.51■□□□□ 0.55
MKS1-201ENST00000313863 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
MKS1-201ENST00000313863 INSRP06213 1382 aa18.49■□□□□ 0.55
MKS1-201ENST00000313863 ZMYM4Q5VZL5 1548 aa18.49■□□□□ 0.55
MKS1-201ENST00000313863 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
MKS1-201ENST00000313863 RRP1P56182 461 aaKnown RBP18.48■□□□□ 0.55
MKS1-201ENST00000313863 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
MKS1-201ENST00000313863 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
MKS1-201ENST00000313863 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
MKS1-201ENST00000313863 WASHC2CQ9Y4E1 1318 aa18.47■□□□□ 0.55
MKS1-201ENST00000313863 ZBTB47Q9UFB7 747 aaPredicted RBP18.47■□□□□ 0.55
MKS1-201ENST00000313863 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
MKS1-201ENST00000313863 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.55
MKS1-201ENST00000313863 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
MKS1-201ENST00000313863 TCERG1O14776 1098 aaKnown RBP18.46■□□□□ 0.55
MKS1-201ENST00000313863 KDM2AQ9Y2K7 1162 aa18.45■□□□□ 0.54
MKS1-201ENST00000313863 ERCC6Q03468 1493 aa18.45■□□□□ 0.54
MKS1-201ENST00000313863 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
MKS1-201ENST00000313863 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
MKS1-201ENST00000313863 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
MKS1-201ENST00000313863 PRAG1Q86YV5 1406 aa18.45■□□□□ 0.54
MKS1-201ENST00000313863 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
MKS1-201ENST00000313863 UNC13BO14795 1591 aa18.43■□□□□ 0.54
MKS1-201ENST00000313863 RTL5Q5HYW3 569 aaPredicted RBP18.42■□□□□ 0.54
MKS1-201ENST00000313863 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
MKS1-201ENST00000313863 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
MKS1-201ENST00000313863 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
MKS1-201ENST00000313863 PLEKHH2Q8IVE3 1493 aa18.41■□□□□ 0.54
MKS1-201ENST00000313863 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
MKS1-201ENST00000313863 MS4A1P11836 297 aa18.41■□□□□ 0.54
MKS1-201ENST00000313863 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
MKS1-201ENST00000313863 COL17A1Q9UMD9 1497 aaPredicted RBP18.4■□□□□ 0.54
MKS1-201ENST00000313863 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
MKS1-201ENST00000313863 MYO5CQ9NQX4 1742 aa18.38■□□□□ 0.53
MKS1-201ENST00000313863 FBLN2P98095 1184 aa18.38■□□□□ 0.53
MKS1-201ENST00000313863 NBR1Q14596 966 aa18.37■□□□□ 0.53
MKS1-201ENST00000313863 HNRNPMP52272 730 aaKnown RBP eCLIP18.37■□□□□ 0.53
MKS1-201ENST00000313863 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
MKS1-201ENST00000313863 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
MKS1-201ENST00000313863 EXOC6Q8TAG9 804 aa18.36■□□□□ 0.53
MKS1-201ENST00000313863 PLXNC1O60486 1568 aa18.35■□□□□ 0.53
MKS1-201ENST00000313863 PER1O15534 1290 aaPredicted RBP18.34■□□□□ 0.53
MKS1-201ENST00000313863 A2MP01023 1474 aa18.32■□□□□ 0.52
MKS1-201ENST00000313863 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
MKS1-201ENST00000313863 ATP10AO60312 1499 aa18.31■□□□□ 0.52
MKS1-201ENST00000313863 PDE4AP27815 886 aa18.3■□□□□ 0.52
MKS1-201ENST00000313863 TMF1P82094 1093 aa18.3■□□□□ 0.52
MKS1-201ENST00000313863 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
MKS1-201ENST00000313863 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
MKS1-201ENST00000313863 BACH2Q9BYV9 841 aa18.29■□□□□ 0.52
MKS1-201ENST00000313863 SYCP2Q9BX26 1530 aa18.29■□□□□ 0.52
MKS1-201ENST00000313863 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
MKS1-201ENST00000313863 PLA2R1Q13018 1463 aa18.28■□□□□ 0.52
MKS1-201ENST00000313863 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
MKS1-201ENST00000313863 DUOX2Q9NRD8 1548 aa18.27■□□□□ 0.52
MKS1-201ENST00000313863 TESK2Q96S53 571 aa18.26■□□□□ 0.51
MKS1-201ENST00000313863 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
MKS1-201ENST00000313863 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
MKS1-201ENST00000313863 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
MKS1-201ENST00000313863 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
MKS1-201ENST00000313863 RGL3Q3MIN7 710 aa18.25■□□□□ 0.51
MKS1-201ENST00000313863 SALL2Q9Y467 1007 aaPredicted RBP18.25■□□□□ 0.51
MKS1-201ENST00000313863 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
MKS1-201ENST00000313863 PANK3Q9H999 370 aa18.24■□□□□ 0.51
MKS1-201ENST00000313863 NPM2Q86SE8 214 aaKnown RBP18.23■□□□□ 0.51
MKS1-201ENST00000313863 TTC37Q6PGP7 1564 aa18.23■□□□□ 0.51
MKS1-201ENST00000313863 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
MKS1-201ENST00000313863 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
MKS1-201ENST00000313863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.22■□□□□ 0.51
MKS1-201ENST00000313863 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
MKS1-201ENST00000313863 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
MKS1-201ENST00000313863 CDCA8Q53HL2 280 aa18.2■□□□□ 0.5
MKS1-201ENST00000313863 STAC3Q96MF2 364 aa18.19■□□□□ 0.5
MKS1-201ENST00000313863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.51e-8■■■■■ 27.4
MKS1-201ENST00000313863 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
MKS1-201ENST00000313863 SYNMO15061 1565 aa18.19■□□□□ 0.5
MKS1-201ENST00000313863 CRBNQ96SW2 442 aa18.18■□□□□ 0.5
MKS1-201ENST00000313863 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
MKS1-201ENST00000313863 MADDQ8WXG6 1647 aa18.17■□□□□ 0.5
MKS1-201ENST00000313863 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
MKS1-201ENST00000313863 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
MKS1-201ENST00000313863 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
MKS1-201ENST00000313863 KNSTRNQ9Y448 316 aa18.16■□□□□ 0.5
MKS1-201ENST00000313863 CENPQQ7L2Z9 268 aaPredicted RBP18.15■□□□□ 0.5
MKS1-201ENST00000313863 CEP152O94986 1710 aa18.15■□□□□ 0.5
MKS1-201ENST00000313863 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.5
MKS1-201ENST00000313863 PLIN1O60240 522 aa18.13■□□□□ 0.49
MKS1-201ENST00000313863 NEFMP07197 916 aa18.13■□□□□ 0.49
MKS1-201ENST00000313863 CHD1O14646 1710 aa18.13■□□□□ 0.49
MKS1-201ENST00000313863 PIK3C2GO75747 1445 aa18.13■□□□□ 0.49
MKS1-201ENST00000313863 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
MKS1-201ENST00000313863 ADAMTS8Q9UP79 889 aa18.12■□□□□ 0.49
MKS1-201ENST00000313863 ASXL1Q8IXJ9 1541 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms