RNA–Protein interactions for RNA: ENST00000311481.10

RAB1B-201, Transcript of RAB1B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1B, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1B-201ENST00000311481 IQGAP3Q86VI3 1631 aa28.26■■■□□ 2.11
RAB1B-201ENST00000311481 UHRF1BP1LA0JNW5 1464 aa28.25■■■□□ 2.11
RAB1B-201ENST00000311481 ZCCHC11Q5TAX3 1644 aaKnown RBP28.23■■■□□ 2.11
RAB1B-201ENST00000311481 DCAF11Q8TEB1 546 aa28.23■■■□□ 2.11
RAB1B-201ENST00000311481 DUOX2Q9NRD8 1548 aa28.22■■■□□ 2.11
RAB1B-201ENST00000311481 TRPM1Q7Z4N2 1603 aa28.21■■■□□ 2.11
RAB1B-201ENST00000311481 CCDC144AA2RUR9 1427 aa28.21■■■□□ 2.11
RAB1B-201ENST00000311481 PLA2R1Q13018 1463 aa28.21■■■□□ 2.11
RAB1B-201ENST00000311481 PLCH2O75038 1416 aa28.21■■■□□ 2.11
RAB1B-201ENST00000311481 ERICH6BQ5W0A0 696 aa28.2■■■□□ 2.11
RAB1B-201ENST00000311481 KDM2AQ9Y2K7 1162 aa28.2■■■□□ 2.11
RAB1B-201ENST00000311481 MAGI2Q86UL8 1455 aa28.2■■■□□ 2.1
RAB1B-201ENST00000311481 MYT1Q01538 1121 aa28.19■■■□□ 2.1
RAB1B-201ENST00000311481 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
RAB1B-201ENST00000311481 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
RAB1B-201ENST00000311481 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
RAB1B-201ENST00000311481 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
RAB1B-201ENST00000311481 ERBINQ96RT1 1412 aa28.16■■■□□ 2.1
RAB1B-201ENST00000311481 E9PCH4 1651 aa28.16■■■□□ 2.1
RAB1B-201ENST00000311481 ATP10AO60312 1499 aa28.15■■■□□ 2.1
RAB1B-201ENST00000311481 ST20-MTHFSA0A0A6YYL1 179 aa28.14■■■□□ 2.1
RAB1B-201ENST00000311481 POLR3GLQ9BT43 218 aa28.14■■■□□ 2.1
RAB1B-201ENST00000311481 LAMC1P11047 1609 aa28.14■■■□□ 2.1
RAB1B-201ENST00000311481 ABCC1P33527 1531 aa28.14■■■□□ 2.09
RAB1B-201ENST00000311481 CYB5RLQ6IPT4 315 aa28.13■■■□□ 2.09
RAB1B-201ENST00000311481 EFCAB2Q5VUJ9 269 aa28.11■■■□□ 2.09
RAB1B-201ENST00000311481 GPRASP1Q5JY77 1395 aa28.11■■■□□ 2.09
RAB1B-201ENST00000311481 A2MP01023 1474 aa28.11■■■□□ 2.09
RAB1B-201ENST00000311481 KTN1Q86UP2 1357 aaKnown RBP28.09■■■□□ 2.09
RAB1B-201ENST00000311481 ARAP3Q8WWN8 1544 aa28.08■■■□□ 2.09
RAB1B-201ENST00000311481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.07■■■□□ 2.082e-6■□□□□ 8.8
RAB1B-201ENST00000311481 EIF2AK4Q9P2K8 1649 aaKnown RBP28.06■■■□□ 2.08
RAB1B-201ENST00000311481 IRX6P78412 446 aaPredicted RBP28.04■■■□□ 2.08
RAB1B-201ENST00000311481 SMG6Q86US8 1419 aaKnown RBP28.03■■■□□ 2.08
RAB1B-201ENST00000311481 PRDM15P57071 1507 aaPredicted RBP28.03■■■□□ 2.08
RAB1B-201ENST00000311481 TRAPPC8Q9Y2L5 1435 aa28.03■■■□□ 2.08
RAB1B-201ENST00000311481 PNISRQ8TF01 805 aaKnown RBP28.02■■■□□ 2.08
RAB1B-201ENST00000311481 PPP4R2Q9NY27 417 aa28.01■■■□□ 2.07
RAB1B-201ENST00000311481 RTEL1-TNFRSF6BF6WH68 1400 aa28■■■□□ 2.07
RAB1B-201ENST00000311481 RALBP1Q15311 655 aa28■■■□□ 2.07
RAB1B-201ENST00000311481 RGL3Q3MIN7 710 aa27.99■■■□□ 2.07
RAB1B-201ENST00000311481 BRD4O60885 1362 aaPredicted RBP27.98■■■□□ 2.07
RAB1B-201ENST00000311481 NBPF1Q3BBV0 1214 aa27.97■■■□□ 2.07
RAB1B-201ENST00000311481 MYBBP1AQ9BQG0 1328 aaKnown RBP27.97■■■□□ 2.07
RAB1B-201ENST00000311481 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
RAB1B-201ENST00000311481 RBM19Q9Y4C8 960 aaKnown RBP27.96■■■□□ 2.07
RAB1B-201ENST00000311481 LRPPRCP42704 1394 aaKnown RBP27.95■■■□□ 2.07
RAB1B-201ENST00000311481 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.07
RAB1B-201ENST00000311481 TMC1Q8TDI8 760 aa27.95■■■□□ 2.06
RAB1B-201ENST00000311481 CNGB1Q14028 1251 aaPredicted RBP27.94■■■□□ 2.06
RAB1B-201ENST00000311481 ZFYVE16Q7Z3T8 1539 aa27.94■■■□□ 2.06
RAB1B-201ENST00000311481 RNF17Q9BXT8 1623 aaKnown RBP27.94■■■□□ 2.06
RAB1B-201ENST00000311481 SPAG9O60271 1321 aaKnown RBP27.91■■■□□ 2.06
RAB1B-201ENST00000311481 DEPDC5O75140 1603 aa27.91■■■□□ 2.06
RAB1B-201ENST00000311481 NUDCQ9Y266 331 aa27.91■■■□□ 2.06
RAB1B-201ENST00000311481 TESK2Q96S53 571 aa27.89■■■□□ 2.06
RAB1B-201ENST00000311481 PARD3Q8TEW0 1356 aa27.89■■■□□ 2.06
RAB1B-201ENST00000311481 ABCA9Q8IUA7 1624 aa27.89■■■□□ 2.05
RAB1B-201ENST00000311481 WDR7Q9Y4E6 1490 aa27.88■■■□□ 2.05
RAB1B-201ENST00000311481 TRPM2O94759 1503 aa27.88■■■□□ 2.05
RAB1B-201ENST00000311481 RNF123Q5XPI4 1314 aa27.87■■■□□ 2.05
RAB1B-201ENST00000311481 PER1O15534 1290 aaPredicted RBP27.85■■■□□ 2.05
RAB1B-201ENST00000311481 CEP152O94986 1710 aa27.85■■■□□ 2.05
RAB1B-201ENST00000311481 INO80Q9ULG1 1556 aaPredicted RBP27.85■■■□□ 2.05
RAB1B-201ENST00000311481 SPHKAPQ2M3C7 1700 aa27.85■■■□□ 2.05
RAB1B-201ENST00000311481 PTPRTO14522 1441 aa27.85■■■□□ 2.05
RAB1B-201ENST00000311481 WASHC2CQ9Y4E1 1318 aa27.85■■■□□ 2.05
RAB1B-201ENST00000311481 MADDQ8WXG6 1647 aa27.84■■■□□ 2.05
RAB1B-201ENST00000311481 DISP3Q9P2K9 1392 aa27.84■■■□□ 2.05
RAB1B-201ENST00000311481 TET3O43151 1660 aa27.83■■■□□ 2.05
RAB1B-201ENST00000311481 AFAP1Q8N556 730 aa27.83■■■□□ 2.05
RAB1B-201ENST00000311481 NPM1P06748 294 aaKnown RBP eCLIP27.82■■■□□ 2.04
RAB1B-201ENST00000311481 VWDEQ8N2E2 1590 aa27.81■■■□□ 2.04
RAB1B-201ENST00000311481 NLRP13Q86W25 1043 aa27.81■■■□□ 2.04
RAB1B-201ENST00000311481 ATP7AQ04656 1500 aa27.81■■■□□ 2.04
RAB1B-201ENST00000311481 IQGAP1P46940 1657 aa27.79■■■□□ 2.04
RAB1B-201ENST00000311481 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
RAB1B-201ENST00000311481 FANCAO15360 1455 aa27.79■■■□□ 2.04
RAB1B-201ENST00000311481 CLTCL1P53675 1640 aa27.77■■■□□ 2.04
RAB1B-201ENST00000311481 TMF1P82094 1093 aa27.77■■■□□ 2.04
RAB1B-201ENST00000311481 NEURL4Q96JN8 1562 aa27.75■■■□□ 2.03
RAB1B-201ENST00000311481 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
RAB1B-201ENST00000311481 INSRP06213 1382 aa27.73■■■□□ 2.03
RAB1B-201ENST00000311481 SCAPERQ9BY12 1400 aa27.73■■■□□ 2.03
RAB1B-201ENST00000311481 B4GALNT3Q6L9W6 998 aa27.72■■■□□ 2.03
RAB1B-201ENST00000311481 ZMYM4Q5VZL5 1548 aa27.72■■■□□ 2.03
RAB1B-201ENST00000311481 KANK1Q14678 1352 aa27.71■■■□□ 2.03
RAB1B-201ENST00000311481 ANP32EQ9BTT0 268 aa27.71■■■□□ 2.03
RAB1B-201ENST00000311481 PANK3Q9H999 370 aa27.7■■■□□ 2.03
RAB1B-201ENST00000311481 ADGRL1O94910 1474 aa27.7■■■□□ 2.03
RAB1B-201ENST00000311481 KIAA1210Q9ULL0 1709 aa27.69■■■□□ 2.02
RAB1B-201ENST00000311481 MROH1Q8NDA8 1641 aa27.68■■■□□ 2.02
RAB1B-201ENST00000311481 SCAF11Q99590 1463 aaKnown RBP27.66■■■□□ 2.02
RAB1B-201ENST00000311481 FANCIQ9NVI1 1328 aa27.65■■■□□ 2.02
RAB1B-201ENST00000311481 PDE3BQ13370 1112 aa27.63■■■□□ 2.01
RAB1B-201ENST00000311481 CC2D1BQ5T0F9 858 aaKnown RBP27.62■■■□□ 2.01
RAB1B-201ENST00000311481 BLMP54132 1417 aaPredicted RBP27.61■■■□□ 2.01
RAB1B-201ENST00000311481 KIF3BO15066 747 aa27.61■■■□□ 2.01
RAB1B-201ENST00000311481 KIDINS220Q9ULH0 1771 aa27.61■■■□□ 2.01
RAB1B-201ENST00000311481 SYNMO15061 1565 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms