RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
SYNPO2-201ENST00000307142 MYOM3Q5VTT5 1437 aa13.63□□□□□ -0.23
SYNPO2-201ENST00000307142 NBR1Q14596 966 aa13.63□□□□□ -0.23
SYNPO2-201ENST00000307142 RALBP1Q15311 655 aa13.63□□□□□ -0.23
SYNPO2-201ENST00000307142 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
SYNPO2-201ENST00000307142 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
SYNPO2-201ENST00000307142 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
SYNPO2-201ENST00000307142 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
SYNPO2-201ENST00000307142 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
SYNPO2-201ENST00000307142 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
SYNPO2-201ENST00000307142 DDRGK1Q96HY6 314 aa13.61□□□□□ -0.23
SYNPO2-201ENST00000307142 GOLGA6L22H0YM25 854 aa13.61□□□□□ -0.23
SYNPO2-201ENST00000307142 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
SYNPO2-201ENST00000307142 CLSTN1O94985 981 aa13.6□□□□□ -0.23
SYNPO2-201ENST00000307142 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
SYNPO2-201ENST00000307142 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
SYNPO2-201ENST00000307142 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
SYNPO2-201ENST00000307142 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
SYNPO2-201ENST00000307142 PROSER2Q86WR7 435 aaPredicted RBP13.59□□□□□ -0.23
SYNPO2-201ENST00000307142 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
SYNPO2-201ENST00000307142 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.23
SYNPO2-201ENST00000307142 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.23
SYNPO2-201ENST00000307142 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
SYNPO2-201ENST00000307142 TTC5Q8N0Z6 440 aa13.58□□□□□ -0.24
SYNPO2-201ENST00000307142 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
SYNPO2-201ENST00000307142 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
SYNPO2-201ENST00000307142 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
SYNPO2-201ENST00000307142 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
SYNPO2-201ENST00000307142 ST20-MTHFSA0A0A6YYL1 179 aa13.57□□□□□ -0.24
SYNPO2-201ENST00000307142 DHX57Q6P158 1386 aaKnown RBP13.57□□□□□ -0.24
SYNPO2-201ENST00000307142 MCCP23508 829 aa13.56□□□□□ -0.24
SYNPO2-201ENST00000307142 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
SYNPO2-201ENST00000307142 RAPGEF3O95398 923 aa13.56□□□□□ -0.24
SYNPO2-201ENST00000307142 TEFQ10587 303 aa13.56□□□□□ -0.24
SYNPO2-201ENST00000307142 PANK3Q9H999 370 aa13.56□□□□□ -0.24
SYNPO2-201ENST00000307142 HSP90AB1P08238 724 aaKnown RBP13.56□□□□□ -0.24
SYNPO2-201ENST00000307142 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
SYNPO2-201ENST00000307142 SMC4Q9NTJ3 1288 aa13.55□□□□□ -0.24
SYNPO2-201ENST00000307142 KIAA1211Q6ZU35 1233 aa13.55□□□□□ -0.24
SYNPO2-201ENST00000307142 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
SYNPO2-201ENST00000307142 HECW1Q76N89 1606 aa13.55□□□□□ -0.24
SYNPO2-201ENST00000307142 GPATCH3Q96I76 525 aa13.55□□□□□ -0.24
SYNPO2-201ENST00000307142 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
SYNPO2-201ENST00000307142 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
SYNPO2-201ENST00000307142 KIF21BO75037 1637 aa13.54□□□□□ -0.24
SYNPO2-201ENST00000307142 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
SYNPO2-201ENST00000307142 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
SYNPO2-201ENST00000307142 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
SYNPO2-201ENST00000307142 HDAC5Q9UQL6 1122 aa13.53□□□□□ -0.24
SYNPO2-201ENST00000307142 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.24
SYNPO2-201ENST00000307142 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.24
SYNPO2-201ENST00000307142 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
SYNPO2-201ENST00000307142 CASKIN1Q8WXD9 1431 aa13.51□□□□□ -0.25
SYNPO2-201ENST00000307142 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
SYNPO2-201ENST00000307142 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
SYNPO2-201ENST00000307142 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
SYNPO2-201ENST00000307142 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
SYNPO2-201ENST00000307142 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
SYNPO2-201ENST00000307142 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
SYNPO2-201ENST00000307142 EIF2S2P20042 333 aaKnown RBP13.5□□□□□ -0.25
SYNPO2-201ENST00000307142 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
SYNPO2-201ENST00000307142 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
SYNPO2-201ENST00000307142 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
SYNPO2-201ENST00000307142 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
SYNPO2-201ENST00000307142 FBXW7Q969H0 707 aa13.49□□□□□ -0.25
SYNPO2-201ENST00000307142 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
SYNPO2-201ENST00000307142 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
SYNPO2-201ENST00000307142 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
SYNPO2-201ENST00000307142 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
SYNPO2-201ENST00000307142 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
SYNPO2-201ENST00000307142 NECTIN2Q92692 538 aa13.48□□□□□ -0.25
SYNPO2-201ENST00000307142 PLEKHH2Q8IVE3 1493 aa13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 CENPJQ9HC77 1338 aaPredicted RBP13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 USP47Q96K76 1375 aa13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
SYNPO2-201ENST00000307142 MIA2Q96PC5 1412 aa13.46□□□□□ -0.25
SYNPO2-201ENST00000307142 NLRP6P59044 892 aa13.46□□□□□ -0.25
SYNPO2-201ENST00000307142 CCER2I3L3R5 266 aa13.46□□□□□ -0.25
SYNPO2-201ENST00000307142 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
SYNPO2-201ENST00000307142 HMMRO75330 724 aa13.46□□□□□ -0.26
SYNPO2-201ENST00000307142 CUL7Q14999 1698 aa13.46□□□□□ -0.26
SYNPO2-201ENST00000307142 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.26
SYNPO2-201ENST00000307142 CFAP44Q96MT7 982 aa13.45□□□□□ -0.26
SYNPO2-201ENST00000307142 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
SYNPO2-201ENST00000307142 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
SYNPO2-201ENST00000307142 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
SYNPO2-201ENST00000307142 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
SYNPO2-201ENST00000307142 DIAPH1O60610 1272 aaKnown RBP13.44□□□□□ -0.26
SYNPO2-201ENST00000307142 NEXNQ0ZGT2 675 aa13.44□□□□□ -0.26
SYNPO2-201ENST00000307142 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
SYNPO2-201ENST00000307142 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
SYNPO2-201ENST00000307142 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
SYNPO2-201ENST00000307142 TRIM34Q9BYJ4 488 aa13.43□□□□□ -0.26
SYNPO2-201ENST00000307142 TOMM22Q9NS69 142 aa13.43□□□□□ -0.26
SYNPO2-201ENST00000307142 C9orf84Q5VXU9 1444 aa13.43□□□□□ -0.26
SYNPO2-201ENST00000307142 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms