RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 PDE4AP27815 886 aa23.83■■□□□ 1.4
RETREG1-201ENST00000306320 DNMT1P26358 1616 aaKnown RBP23.82■■□□□ 1.4
RETREG1-201ENST00000306320 C9orf84Q5VXU9 1444 aa23.82■■□□□ 1.4
RETREG1-201ENST00000306320 NBPF1Q3BBV0 1214 aa23.81■■□□□ 1.4
RETREG1-201ENST00000306320 PLIN1O60240 522 aa23.8■■□□□ 1.4
RETREG1-201ENST00000306320 TEX14Q8IWB6 1497 aa23.79■■□□□ 1.4
RETREG1-201ENST00000306320 KIAA1107Q9UPP5 1409 aa23.79■■□□□ 1.4
RETREG1-201ENST00000306320 NUP160Q12769 1436 aa23.75■■□□□ 1.39
RETREG1-201ENST00000306320 CC2D1BQ5T0F9 858 aaKnown RBP23.72■■□□□ 1.39
RETREG1-201ENST00000306320 PPM1GO15355 546 aaPredicted RBP23.69■■□□□ 1.38
RETREG1-201ENST00000306320 AFAP1Q8N556 730 aa23.69■■□□□ 1.38
RETREG1-201ENST00000306320 FRAT1Q92837 279 aaPredicted RBP23.69■■□□□ 1.38
RETREG1-201ENST00000306320 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
RETREG1-201ENST00000306320 GSE1Q14687 1217 aa23.68■■□□□ 1.38
RETREG1-201ENST00000306320 SPATA31E1Q6ZUB1 1445 aa23.65■■□□□ 1.38
RETREG1-201ENST00000306320 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
RETREG1-201ENST00000306320 NFKBIBQ15653 356 aa23.64■■□□□ 1.38
RETREG1-201ENST00000306320 RCAN3Q9UKA8 241 aa23.63■■□□□ 1.37
RETREG1-201ENST00000306320 RGS3P49796 1198 aa23.62■■□□□ 1.37
RETREG1-201ENST00000306320 RRP1P56182 461 aaKnown RBP23.62■■□□□ 1.37
RETREG1-201ENST00000306320 TCERG1O14776 1098 aaKnown RBP23.62■■□□□ 1.37
RETREG1-201ENST00000306320 ABCC10Q5T3U5 1492 aa23.61■■□□□ 1.37
RETREG1-201ENST00000306320 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
RETREG1-201ENST00000306320 CDCA7LQ96GN5 454 aa23.6■■□□□ 1.37
RETREG1-201ENST00000306320 BACH2Q9BYV9 841 aa23.59■■□□□ 1.37
RETREG1-201ENST00000306320 SMG6Q86US8 1419 aaKnown RBP23.58■■□□□ 1.37
RETREG1-201ENST00000306320 ABCA8O94911 1581 aa23.56■■□□□ 1.36
RETREG1-201ENST00000306320 DHX29Q7Z478 1369 aaKnown RBP23.56■■□□□ 1.36
RETREG1-201ENST00000306320 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
RETREG1-201ENST00000306320 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
RETREG1-201ENST00000306320 CCDC144AA2RUR9 1427 aa23.55■■□□□ 1.36
RETREG1-201ENST00000306320 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
RETREG1-201ENST00000306320 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
RETREG1-201ENST00000306320 USP35Q9P2H5 1018 aa23.54■■□□□ 1.36
RETREG1-201ENST00000306320 SYCP2Q9BX26 1530 aa23.54■■□□□ 1.36
RETREG1-201ENST00000306320 BCORL1Q5H9F3 1711 aa23.54■■□□□ 1.36
RETREG1-201ENST00000306320 CHGAP10645 457 aaKnown RBP23.53■■□□□ 1.36
RETREG1-201ENST00000306320 MBD5Q9P267 1494 aa23.52■■□□□ 1.36
RETREG1-201ENST00000306320 UBE2Q2Q8WVN8 375 aa23.52■■□□□ 1.36
RETREG1-201ENST00000306320 CRBNQ96SW2 442 aa23.51■■□□□ 1.35
RETREG1-201ENST00000306320 ADGRL2O95490 1459 aa23.5■■□□□ 1.35
RETREG1-201ENST00000306320 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
RETREG1-201ENST00000306320 DDRGK1Q96HY6 314 aa23.49■■□□□ 1.35
RETREG1-201ENST00000306320 EFCAB2Q5VUJ9 269 aa23.49■■□□□ 1.35
RETREG1-201ENST00000306320 PANK3Q9H999 370 aa23.49■■□□□ 1.35
RETREG1-201ENST00000306320 CCDC141Q6ZP82 1450 aa23.48■■□□□ 1.35
RETREG1-201ENST00000306320 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
RETREG1-201ENST00000306320 KIF3BO15066 747 aa23.46■■□□□ 1.35
RETREG1-201ENST00000306320 SAMD9LQ8IVG5 1584 aa23.45■■□□□ 1.34
RETREG1-201ENST00000306320 SLKQ9H2G2 1235 aaPredicted RBP23.44■■□□□ 1.34
RETREG1-201ENST00000306320 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
RETREG1-201ENST00000306320 NUTM2DQ5VT03 806 aaPredicted RBP23.43■■□□□ 1.34
RETREG1-201ENST00000306320 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
RETREG1-201ENST00000306320 TTC37Q6PGP7 1564 aa23.42■■□□□ 1.34
RETREG1-201ENST00000306320 FAM135AQ9P2D6 1515 aa23.42■■□□□ 1.34
RETREG1-201ENST00000306320 CHD1O14646 1710 aa23.41■■□□□ 1.34
RETREG1-201ENST00000306320 C20orf194Q5TEA3 1177 aa23.41■■□□□ 1.34
RETREG1-201ENST00000306320 WASHC2CQ9Y4E1 1318 aa23.41■■□□□ 1.34
RETREG1-201ENST00000306320 TRAPPC8Q9Y2L5 1435 aa23.41■■□□□ 1.34
RETREG1-201ENST00000306320 SPRYD3Q8NCJ5 442 aa23.41■■□□□ 1.34
RETREG1-201ENST00000306320 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
RETREG1-201ENST00000306320 ARHGEF12Q9NZN5 1544 aa23.39■■□□□ 1.33
RETREG1-201ENST00000306320 RSPH4AQ5TD94 716 aa23.38■■□□□ 1.33
RETREG1-201ENST00000306320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.38■■□□□ 1.33
RETREG1-201ENST00000306320 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
RETREG1-201ENST00000306320 PLA2R1Q13018 1463 aa23.36■■□□□ 1.33
RETREG1-201ENST00000306320 CROCC2H7BZ55 1655 aa23.36■■□□□ 1.33
RETREG1-201ENST00000306320 NAP1L5Q96NT1 182 aaPredicted RBP23.36■■□□□ 1.33
RETREG1-201ENST00000306320 CDC42BPBQ9Y5S2 1711 aa23.35■■□□□ 1.33
RETREG1-201ENST00000306320 MYBBP1AQ9BQG0 1328 aaKnown RBP23.35■■□□□ 1.33
RETREG1-201ENST00000306320 GZF1Q9H116 711 aaPredicted RBP23.35■■□□□ 1.33
RETREG1-201ENST00000306320 RNF123Q5XPI4 1314 aa23.34■■□□□ 1.33
RETREG1-201ENST00000306320 RALGAPBQ86X10 1494 aa23.34■■□□□ 1.33
RETREG1-201ENST00000306320 KDM5CP41229 1560 aa23.34■■□□□ 1.33
RETREG1-201ENST00000306320 GGT6Q6P531 493 aa23.34■■□□□ 1.33
RETREG1-201ENST00000306320 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.32
RETREG1-201ENST00000306320 TESK2Q96S53 571 aa23.32■■□□□ 1.32
RETREG1-201ENST00000306320 TMF1P82094 1093 aa23.31■■□□□ 1.32
RETREG1-201ENST00000306320 KTN1Q86UP2 1357 aaKnown RBP23.31■■□□□ 1.32
RETREG1-201ENST00000306320 MS4A1P11836 297 aa23.31■■□□□ 1.32
RETREG1-201ENST00000306320 POGKQ9P215 609 aa23.31■■□□□ 1.32
RETREG1-201ENST00000306320 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
RETREG1-201ENST00000306320 PRAG1Q86YV5 1406 aa23.3■■□□□ 1.32
RETREG1-201ENST00000306320 VSIG10Q8N0Z9 540 aa23.3■■□□□ 1.32
RETREG1-201ENST00000306320 A2MP01023 1474 aa23.29■■□□□ 1.32
RETREG1-201ENST00000306320 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
RETREG1-201ENST00000306320 SCAPERQ9BY12 1400 aa23.28■■□□□ 1.32
RETREG1-201ENST00000306320 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
RETREG1-201ENST00000306320 RALBP1Q15311 655 aa23.28■■□□□ 1.32
RETREG1-201ENST00000306320 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
RETREG1-201ENST00000306320 UHRF1BP1Q6BDS2 1440 aa23.27■■□□□ 1.32
RETREG1-201ENST00000306320 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
RETREG1-201ENST00000306320 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
RETREG1-201ENST00000306320 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
RETREG1-201ENST00000306320 PKNOX2Q96KN3 472 aa23.24■■□□□ 1.31
RETREG1-201ENST00000306320 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
RETREG1-201ENST00000306320 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
RETREG1-201ENST00000306320 PREX2Q70Z35 1606 aa23.21■■□□□ 1.31
RETREG1-201ENST00000306320 ABCC2Q92887 1545 aa23.21■■□□□ 1.31
RETREG1-201ENST00000306320 PLCH2O75038 1416 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms