RNA–Protein interactions for RNA: ENST00000306049.9

TEFM-201, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 2

Gene TEFM, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-201ENST00000306049 POLR1AO95602 1720 aaPredicted RBP15.46■□□□□ 0.07
TEFM-201ENST00000306049 GGT6Q6P531 493 aa15.45■□□□□ 0.06
TEFM-201ENST00000306049 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
TEFM-201ENST00000306049 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
TEFM-201ENST00000306049 A2ML1A8K2U0 1454 aa15.44■□□□□ 0.06
TEFM-201ENST00000306049 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
TEFM-201ENST00000306049 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
TEFM-201ENST00000306049 NEURL4Q96JN8 1562 aa15.41■□□□□ 0.06
TEFM-201ENST00000306049 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
TEFM-201ENST00000306049 TIAM1Q13009 1591 aa15.4■□□□□ 0.06
TEFM-201ENST00000306049 ANKLE2Q86XL3 938 aa15.39■□□□□ 0.05
TEFM-201ENST00000306049 MTUS2Q5JR59 1369 aa15.38■□□□□ 0.05
TEFM-201ENST00000306049 VWDEQ8N2E2 1590 aa15.37■□□□□ 0.05
TEFM-201ENST00000306049 ZNF644Q9H582 1327 aaPredicted RBP15.36■□□□□ 0.05
TEFM-201ENST00000306049 MBD5Q9P267 1494 aa15.35■□□□□ 0.05
TEFM-201ENST00000306049 RTEL1-TNFRSF6BF6WH68 1400 aa15.34■□□□□ 0.05
TEFM-201ENST00000306049 EHBP1L1Q8N3D4 1523 aa15.34■□□□□ 0.05
TEFM-201ENST00000306049 THEMISQ8N1K5 641 aaPredicted RBP15.34■□□□□ 0.05
TEFM-201ENST00000306049 TNRQ92752 1358 aa15.34■□□□□ 0.05
TEFM-201ENST00000306049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.34■□□□□ 0.05
TEFM-201ENST00000306049 DHX29Q7Z478 1369 aaKnown RBP15.33■□□□□ 0.04
TEFM-201ENST00000306049 NPHP4O75161 1426 aaPredicted RBP15.33■□□□□ 0.04
TEFM-201ENST00000306049 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
TEFM-201ENST00000306049 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
TEFM-201ENST00000306049 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
TEFM-201ENST00000306049 POTEAQ6S8J7 498 aa15.32■□□□□ 0.04
TEFM-201ENST00000306049 FAM135AQ9P2D6 1515 aa15.32■□□□□ 0.04
TEFM-201ENST00000306049 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
TEFM-201ENST00000306049 PZPP20742 1482 aa15.31■□□□□ 0.04
TEFM-201ENST00000306049 LRRC7Q96NW7 1537 aa15.31■□□□□ 0.04
TEFM-201ENST00000306049 MED14O60244 1454 aa15.3■□□□□ 0.04
TEFM-201ENST00000306049 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
TEFM-201ENST00000306049 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
TEFM-201ENST00000306049 IQGAP1P46940 1657 aa15.29■□□□□ 0.04
TEFM-201ENST00000306049 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
TEFM-201ENST00000306049 KIF3BO15066 747 aa15.29■□□□□ 0.04
TEFM-201ENST00000306049 CFAP65Q6ZU64 1925 aaKnown RBP15.29■□□□□ 0.04
TEFM-201ENST00000306049 CCDC141Q6ZP82 1450 aa15.28■□□□□ 0.04
TEFM-201ENST00000306049 SYNMO15061 1565 aa15.28■□□□□ 0.04
TEFM-201ENST00000306049 UGGT1Q9NYU2 1555 aa15.28■□□□□ 0.04
TEFM-201ENST00000306049 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
TEFM-201ENST00000306049 NLRP1Q9C000 1473 aa15.26■□□□□ 0.03
TEFM-201ENST00000306049 WASHC2CQ9Y4E1 1318 aa15.25■□□□□ 0.03
TEFM-201ENST00000306049 MIA2Q96PC5 1412 aa15.25■□□□□ 0.03
TEFM-201ENST00000306049 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
TEFM-201ENST00000306049 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
TEFM-201ENST00000306049 NCOA2Q15596 1464 aa15.23■□□□□ 0.03
TEFM-201ENST00000306049 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
TEFM-201ENST00000306049 RSPH4AQ5TD94 716 aa15.21■□□□□ 0.03
TEFM-201ENST00000306049 CEP152O94986 1710 aa15.2■□□□□ 0.02
TEFM-201ENST00000306049 FAM135BQ49AJ0 1406 aa15.18■□□□□ 0.02
TEFM-201ENST00000306049 ABCC3O15438 1527 aa15.18■□□□□ 0.02
TEFM-201ENST00000306049 UBR1Q8IWV7 1749 aa15.18■□□□□ 0.02
TEFM-201ENST00000306049 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
TEFM-201ENST00000306049 MAST1Q9Y2H9 1570 aa15.17■□□□□ 0.02
TEFM-201ENST00000306049 XIRP1Q702N8 1843 aaKnown RBP15.17■□□□□ 0.02
TEFM-201ENST00000306049 TSPY4P0CV99 314 aa15.16■□□□□ 0.02
TEFM-201ENST00000306049 TSPY10P0CW01 314 aa15.16■□□□□ 0.02
TEFM-201ENST00000306049 MROH1Q8NDA8 1641 aa15.16■□□□□ 0.02
TEFM-201ENST00000306049 ERVK-7P63135 1459 aa15.15■□□□□ 0.02
TEFM-201ENST00000306049 UPF1Q92900 1129 aaKnown RBP eCLIP15.14■□□□□ 0.01
TEFM-201ENST00000306049 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
TEFM-201ENST00000306049 SCAF11Q99590 1463 aaKnown RBP15.11■□□□□ 0.01
TEFM-201ENST00000306049 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
TEFM-201ENST00000306049 LRRC9Q6ZRR7 1453 aa15.09■□□□□ 0.01
TEFM-201ENST00000306049 TXNDC2Q86VQ3 553 aa15.09■□□□□ 0.01
TEFM-201ENST00000306049 ARHGAP23Q9P227 1491 aa15.08■□□□□ 0
TEFM-201ENST00000306049 SLIT1O75093 1534 aa15.07■□□□□ 0
TEFM-201ENST00000306049 LTKP29376 864 aa15.07■□□□□ 0
TEFM-201ENST00000306049 TRIM52Q96A61 297 aa15.07■□□□□ 0
TEFM-201ENST00000306049 EID1Q9Y6B2 187 aa15.07■□□□□ 0
TEFM-201ENST00000306049 DUOX2Q9NRD8 1548 aa15.07■□□□□ 0
TEFM-201ENST00000306049 CROCC2H7BZ55 1655 aa15.06■□□□□ 0
TEFM-201ENST00000306049 TMEM94Q12767 1356 aa15.06■□□□□ 0
TEFM-201ENST00000306049 PIK3C2BO00750 1634 aa15.06■□□□□ 0
TEFM-201ENST00000306049 PHLPP1O60346 1717 aa15.06■□□□□ 0
TEFM-201ENST00000306049 MEX3CQ5U5Q3 659 aaKnown RBP15.05■□□□□ -0
TEFM-201ENST00000306049 JCADQ9P266 1359 aa15.05■□□□□ -0
TEFM-201ENST00000306049 PRDM15P57071 1507 aaPredicted RBP15.05■□□□□ -0
TEFM-201ENST00000306049 ZNF772Q68DY9 489 aaPredicted RBP15.04■□□□□ -0
TEFM-201ENST00000306049 PROSER2Q86WR7 435 aaPredicted RBP15.04■□□□□ -0
TEFM-201ENST00000306049 ARHGAP31Q2M1Z3 1444 aa15.03■□□□□ -0
TEFM-201ENST00000306049 SRCAPQ6ZRS2 3230 aa15.02■□□□□ -0
TEFM-201ENST00000306049 MYOM3Q5VTT5 1437 aa15.02■□□□□ -0
TEFM-201ENST00000306049 VPS8Q8N3P4 1428 aa15.02■□□□□ -0
TEFM-201ENST00000306049 RBM33Q96EV2 1170 aaKnown RBP15.02■□□□□ -0
TEFM-201ENST00000306049 KDM5AP29375 1690 aaKnown RBP15.02□□□□□ -0.01
TEFM-201ENST00000306049 KCNA6P17658 529 aa15.01□□□□□ -0.01
TEFM-201ENST00000306049 RXRBP28702 533 aa15□□□□□ -0.01
TEFM-201ENST00000306049 SLAIN2Q9P270 581 aa15□□□□□ -0.01
TEFM-201ENST00000306049 MAP3K1Q13233 1512 aa15□□□□□ -0.01
TEFM-201ENST00000306049 ERBINQ96RT1 1412 aa15□□□□□ -0.01
TEFM-201ENST00000306049 KIF15Q9NS87 1388 aa14.99□□□□□ -0.01
TEFM-201ENST00000306049 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
TEFM-201ENST00000306049 MSH6P52701 1360 aa14.98□□□□□ -0.01
TEFM-201ENST00000306049 TMEM2Q9UHN6 1383 aa14.98□□□□□ -0.01
TEFM-201ENST00000306049 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
TEFM-201ENST00000306049 SPATA31A6Q5VVP1 1343 aa14.97□□□□□ -0.01
TEFM-201ENST00000306049 PTPN23Q9H3S7 1636 aa14.97□□□□□ -0.01
TEFM-201ENST00000306049 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms