RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PKD2Q13563 968 aa11.86□□□□□ -0.51
TM4SF1-201ENST00000305366 RSPH4AQ5TD94 716 aa11.86□□□□□ -0.51
TM4SF1-201ENST00000305366 CAMSAP1Q5T5Y3 1602 aa11.86□□□□□ -0.51
TM4SF1-201ENST00000305366 TIAM1Q13009 1591 aa11.86□□□□□ -0.51
TM4SF1-201ENST00000305366 EHBP1L1Q8N3D4 1523 aa11.85□□□□□ -0.51
TM4SF1-201ENST00000305366 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
TM4SF1-201ENST00000305366 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
TM4SF1-201ENST00000305366 SETD1BQ9UPS6 1966 aaKnown RBP11.83□□□□□ -0.51
TM4SF1-201ENST00000305366 ILDR2Q71H61 639 aa11.83□□□□□ -0.52
TM4SF1-201ENST00000305366 CAMSAP2Q08AD1 1489 aa11.82□□□□□ -0.52
TM4SF1-201ENST00000305366 INO80Q9ULG1 1556 aaPredicted RBP11.82□□□□□ -0.52
TM4SF1-201ENST00000305366 CLTCQ00610 1675 aaKnown RBP11.82□□□□□ -0.52
TM4SF1-201ENST00000305366 APLP2Q06481 763 aa11.82□□□□□ -0.52
TM4SF1-201ENST00000305366 TNRQ92752 1358 aa11.82□□□□□ -0.52
TM4SF1-201ENST00000305366 CCDC141Q6ZP82 1450 aa11.82□□□□□ -0.52
TM4SF1-201ENST00000305366 PLXNC1O60486 1568 aa11.81□□□□□ -0.52
TM4SF1-201ENST00000305366 PIP4K2BP78356 416 aa11.81□□□□□ -0.52
TM4SF1-201ENST00000305366 ANKLE2Q86XL3 938 aa11.8□□□□□ -0.52
TM4SF1-201ENST00000305366 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
TM4SF1-201ENST00000305366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
TM4SF1-201ENST00000305366 THEMISQ8N1K5 641 aaPredicted RBP11.79□□□□□ -0.52
TM4SF1-201ENST00000305366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.79□□□□□ -0.52
TM4SF1-201ENST00000305366 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
TM4SF1-201ENST00000305366 VPS8Q8N3P4 1428 aa11.79□□□□□ -0.52
TM4SF1-201ENST00000305366 LRRC9Q6ZRR7 1453 aa11.78□□□□□ -0.52
TM4SF1-201ENST00000305366 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
TM4SF1-201ENST00000305366 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
TM4SF1-201ENST00000305366 MIA2Q96PC5 1412 aa11.77□□□□□ -0.53
TM4SF1-201ENST00000305366 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.53
TM4SF1-201ENST00000305366 CHIC2Q9UKJ5 165 aa11.77□□□□□ -0.53
TM4SF1-201ENST00000305366 MROH2AA6NES4 1674 aa11.76□□□□□ -0.53
TM4SF1-201ENST00000305366 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
TM4SF1-201ENST00000305366 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
TM4SF1-201ENST00000305366 MYO3AQ8NEV4 1616 aa11.75□□□□□ -0.53
TM4SF1-201ENST00000305366 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
TM4SF1-201ENST00000305366 TOM1O60784 492 aa11.73□□□□□ -0.53
TM4SF1-201ENST00000305366 HSPA1LP34931 641 aa11.73□□□□□ -0.53
TM4SF1-201ENST00000305366 PZPP20742 1482 aa11.73□□□□□ -0.53
TM4SF1-201ENST00000305366 KDM5DQ9BY66 1539 aa11.73□□□□□ -0.53
TM4SF1-201ENST00000305366 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
TM4SF1-201ENST00000305366 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.53
TM4SF1-201ENST00000305366 SOCS7O14512 581 aa11.71□□□□□ -0.54
TM4SF1-201ENST00000305366 STAG3Q9UJ98 1225 aa11.71□□□□□ -0.54
TM4SF1-201ENST00000305366 TXNDC2Q86VQ3 553 aa11.7□□□□□ -0.54
TM4SF1-201ENST00000305366 FAM135AQ9P2D6 1515 aa11.7□□□□□ -0.54
TM4SF1-201ENST00000305366 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
TM4SF1-201ENST00000305366 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
TM4SF1-201ENST00000305366 KIF15Q9NS87 1388 aa11.7□□□□□ -0.54
TM4SF1-201ENST00000305366 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
TM4SF1-201ENST00000305366 ARHGEF5Q12774 1597 aa11.69□□□□□ -0.54
TM4SF1-201ENST00000305366 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
TM4SF1-201ENST00000305366 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
TM4SF1-201ENST00000305366 UGGT1Q9NYU2 1555 aa11.68□□□□□ -0.54
TM4SF1-201ENST00000305366 CCER1Q8TC90 406 aaPredicted RBP11.68□□□□□ -0.54
TM4SF1-201ENST00000305366 ABCC5O15440 1437 aa11.68□□□□□ -0.54
TM4SF1-201ENST00000305366 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
TM4SF1-201ENST00000305366 LTKP29376 864 aa11.67□□□□□ -0.54
TM4SF1-201ENST00000305366 ZNF142P52746 1687 aaPredicted RBP11.67□□□□□ -0.54
TM4SF1-201ENST00000305366 ABCC3O15438 1527 aa11.66□□□□□ -0.54
TM4SF1-201ENST00000305366 BCANQ96GW7 911 aa11.66□□□□□ -0.54
TM4SF1-201ENST00000305366 EID1Q9Y6B2 187 aa11.66□□□□□ -0.54
TM4SF1-201ENST00000305366 ERVK-7P63135 1459 aa11.65□□□□□ -0.54
TM4SF1-201ENST00000305366 MAP3K1Q13233 1512 aa11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 KANK1Q14678 1352 aa11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 IDI1Q13907 227 aa11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 SPATA31D1Q6ZQQ2 1576 aa11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 NEURL4Q96JN8 1562 aa11.64□□□□□ -0.55
TM4SF1-201ENST00000305366 ANKRD30AQ9BXX3 1397 aa11.63□□□□□ -0.55
TM4SF1-201ENST00000305366 DUOX2Q9NRD8 1548 aa11.63□□□□□ -0.55
TM4SF1-201ENST00000305366 DAPK1P53355 1430 aa11.63□□□□□ -0.55
TM4SF1-201ENST00000305366 SLC26A8Q96RN1 970 aa11.62□□□□□ -0.55
TM4SF1-201ENST00000305366 CPS1P31327 1500 aa11.62□□□□□ -0.55
TM4SF1-201ENST00000305366 FGD6Q6ZV73 1430 aa11.62□□□□□ -0.55
TM4SF1-201ENST00000305366 MAST1Q9Y2H9 1570 aa11.61□□□□□ -0.55
TM4SF1-201ENST00000305366 ITGAEP38570 1179 aa11.61□□□□□ -0.55
TM4SF1-201ENST00000305366 MED14O60244 1454 aa11.6□□□□□ -0.55
TM4SF1-201ENST00000305366 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
TM4SF1-201ENST00000305366 ERBINQ96RT1 1412 aa11.59□□□□□ -0.55
TM4SF1-201ENST00000305366 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
TM4SF1-201ENST00000305366 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
TM4SF1-201ENST00000305366 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
TM4SF1-201ENST00000305366 SCAF11Q99590 1463 aaKnown RBP11.59□□□□□ -0.55
TM4SF1-201ENST00000305366 MROH1Q8NDA8 1641 aa11.58□□□□□ -0.56
TM4SF1-201ENST00000305366 RNF17Q9BXT8 1623 aaKnown RBP11.58□□□□□ -0.56
TM4SF1-201ENST00000305366 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
TM4SF1-201ENST00000305366 TMEM2Q9UHN6 1383 aa11.58□□□□□ -0.56
TM4SF1-201ENST00000305366 LRRC7Q96NW7 1537 aa11.57□□□□□ -0.56
TM4SF1-201ENST00000305366 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
TM4SF1-201ENST00000305366 ARHGAP31Q2M1Z3 1444 aa11.56□□□□□ -0.56
TM4SF1-201ENST00000305366 PPP1R15AO75807 674 aaPredicted RBP11.56□□□□□ -0.56
TM4SF1-201ENST00000305366 EIF2AK4Q9P2K8 1649 aaKnown RBP11.55□□□□□ -0.56
TM4SF1-201ENST00000305366 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
TM4SF1-201ENST00000305366 KCNA6P17658 529 aa11.54□□□□□ -0.56
TM4SF1-201ENST00000305366 DEPDC5O75140 1603 aa11.54□□□□□ -0.56
TM4SF1-201ENST00000305366 CEP152O94986 1710 aa11.54□□□□□ -0.56
TM4SF1-201ENST00000305366 CFAP65Q6ZU64 1925 aaKnown RBP11.54□□□□□ -0.56
TM4SF1-201ENST00000305366 IQGAP1P46940 1657 aa11.54□□□□□ -0.56
TM4SF1-201ENST00000305366 SLC52A1Q9NWF4 448 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms