RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
TRABD-201ENST00000303434 MRS2Q9HD23 443 aa25.08■■□□□ 1.61
TRABD-201ENST00000303434 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
TRABD-201ENST00000303434 BCORL1Q5H9F3 1711 aa25.06■■□□□ 1.6
TRABD-201ENST00000303434 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
TRABD-201ENST00000303434 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
TRABD-201ENST00000303434 PREX2Q70Z35 1606 aa25.05■■□□□ 1.6
TRABD-201ENST00000303434 KDM5CP41229 1560 aa25.04■■□□□ 1.6
TRABD-201ENST00000303434 RSPH4AQ5TD94 716 aa25.03■■□□□ 1.6
TRABD-201ENST00000303434 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
TRABD-201ENST00000303434 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
TRABD-201ENST00000303434 RALGAPBQ86X10 1494 aa25■■□□□ 1.59
TRABD-201ENST00000303434 ARID4BQ4LE39 1312 aaPredicted RBP25■■□□□ 1.59
TRABD-201ENST00000303434 DHX29Q7Z478 1369 aaKnown RBP24.99■■□□□ 1.59
TRABD-201ENST00000303434 SHROOM2Q13796 1616 aa24.98■■□□□ 1.59
TRABD-201ENST00000303434 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
TRABD-201ENST00000303434 NEFMP07197 916 aa24.96■■□□□ 1.59
TRABD-201ENST00000303434 RSPH6AQ9H0K4 717 aa24.96■■□□□ 1.59
TRABD-201ENST00000303434 CARD11Q9BXL7 1154 aa24.96■■□□□ 1.59
TRABD-201ENST00000303434 KDM2AQ9Y2K7 1162 aa24.96■■□□□ 1.59
TRABD-201ENST00000303434 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
TRABD-201ENST00000303434 ZBED9Q6R2W3 1325 aa24.94■■□□□ 1.58
TRABD-201ENST00000303434 FAM135AQ9P2D6 1515 aa24.94■■□□□ 1.58
TRABD-201ENST00000303434 DCAF11Q8TEB1 546 aa24.94■■□□□ 1.58
TRABD-201ENST00000303434 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
TRABD-201ENST00000303434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.587e-7■■■■□ 24.1
TRABD-201ENST00000303434 SYCP2Q9BX26 1530 aa24.92■■□□□ 1.58
TRABD-201ENST00000303434 ARHGAP5Q13017 1502 aa24.92■■□□□ 1.58
TRABD-201ENST00000303434 BRPF3Q9ULD4 1205 aa24.91■■□□□ 1.58
TRABD-201ENST00000303434 MAST1Q9Y2H9 1570 aa24.9■■□□□ 1.58
TRABD-201ENST00000303434 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.57
TRABD-201ENST00000303434 ROCK2O75116 1388 aaKnown RBP24.89■■□□□ 1.57
TRABD-201ENST00000303434 PPM1GO15355 546 aaPredicted RBP24.89■■□□□ 1.57
TRABD-201ENST00000303434 ABCC2Q92887 1545 aa24.88■■□□□ 1.57
TRABD-201ENST00000303434 ST20-MTHFSA0A0A6YYL1 179 aa24.87■■□□□ 1.57
TRABD-201ENST00000303434 CNGB1Q14028 1251 aaPredicted RBP24.86■■□□□ 1.57
TRABD-201ENST00000303434 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
TRABD-201ENST00000303434 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
TRABD-201ENST00000303434 GLIPR1L2Q4G1C9 344 aa24.85■■□□□ 1.57
TRABD-201ENST00000303434 UNC13BO14795 1591 aa24.84■■□□□ 1.57
TRABD-201ENST00000303434 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
TRABD-201ENST00000303434 PLEKHH2Q8IVE3 1493 aa24.82■■□□□ 1.56
TRABD-201ENST00000303434 GSE1Q14687 1217 aa24.81■■□□□ 1.56
TRABD-201ENST00000303434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.81■■□□□ 1.569e-7■□□□□ 9.1
TRABD-201ENST00000303434 PLXNC1O60486 1568 aa24.8■■□□□ 1.56
TRABD-201ENST00000303434 LAS1LQ9Y4W2 734 aaKnown RBP24.79■■□□□ 1.56
TRABD-201ENST00000303434 PLA2R1Q13018 1463 aa24.79■■□□□ 1.56
TRABD-201ENST00000303434 PRAG1Q86YV5 1406 aa24.77■■□□□ 1.56
TRABD-201ENST00000303434 TRPM1Q7Z4N2 1603 aa24.77■■□□□ 1.56
TRABD-201ENST00000303434 RGL3Q3MIN7 710 aa24.77■■□□□ 1.56
TRABD-201ENST00000303434 IQGAP3Q86VI3 1631 aa24.76■■□□□ 1.55
TRABD-201ENST00000303434 PLCH2O75038 1416 aa24.74■■□□□ 1.55
TRABD-201ENST00000303434 DUOX2Q9NRD8 1548 aa24.74■■□□□ 1.55
TRABD-201ENST00000303434 FAM43AQ8N2R8 423 aa24.74■■□□□ 1.55
TRABD-201ENST00000303434 PNISRQ8TF01 805 aaKnown RBP24.74■■□□□ 1.55
TRABD-201ENST00000303434 TMC1Q8TDI8 760 aa24.73■■□□□ 1.55
TRABD-201ENST00000303434 ZCCHC11Q5TAX3 1644 aaKnown RBP24.72■■□□□ 1.55
TRABD-201ENST00000303434 EFCAB2Q5VUJ9 269 aa24.72■■□□□ 1.55
TRABD-201ENST00000303434 A2MP01023 1474 aa24.71■■□□□ 1.55
TRABD-201ENST00000303434 NBPF1Q3BBV0 1214 aa24.7■■□□□ 1.55
TRABD-201ENST00000303434 E9PCH4 1651 aa24.7■■□□□ 1.55
TRABD-201ENST00000303434 SMG6Q86US8 1419 aaKnown RBP24.7■■□□□ 1.54
TRABD-201ENST00000303434 ERBINQ96RT1 1412 aa24.69■■□□□ 1.54
TRABD-201ENST00000303434 UHRF1BP1LA0JNW5 1464 aa24.69■■□□□ 1.54
TRABD-201ENST00000303434 KTN1Q86UP2 1357 aaKnown RBP24.68■■□□□ 1.54
TRABD-201ENST00000303434 GPRASP1Q5JY77 1395 aa24.68■■□□□ 1.54
TRABD-201ENST00000303434 RALBP1Q15311 655 aa24.68■■□□□ 1.54
TRABD-201ENST00000303434 MAGI2Q86UL8 1455 aa24.67■■□□□ 1.54
TRABD-201ENST00000303434 RNF123Q5XPI4 1314 aa24.66■■□□□ 1.54
TRABD-201ENST00000303434 ATP10AO60312 1499 aa24.66■■□□□ 1.54
TRABD-201ENST00000303434 MYBBP1AQ9BQG0 1328 aaKnown RBP24.65■■□□□ 1.54
TRABD-201ENST00000303434 ZMYND15Q9H091 742 aa24.64■■□□□ 1.54
TRABD-201ENST00000303434 NUDCQ9Y266 331 aa24.64■■□□□ 1.54
TRABD-201ENST00000303434 BRD4O60885 1362 aaPredicted RBP24.64■■□□□ 1.53
TRABD-201ENST00000303434 ABCC1P33527 1531 aa24.63■■□□□ 1.53
TRABD-201ENST00000303434 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
TRABD-201ENST00000303434 TRAPPC8Q9Y2L5 1435 aa24.63■■□□□ 1.53
TRABD-201ENST00000303434 LAMC1P11047 1609 aa24.62■■□□□ 1.53
TRABD-201ENST00000303434 LRPPRCP42704 1394 aaKnown RBP24.61■■□□□ 1.53
TRABD-201ENST00000303434 PRDM15P57071 1507 aaPredicted RBP24.6■■□□□ 1.53
TRABD-201ENST00000303434 TCERG1O14776 1098 aaKnown RBP24.6■■□□□ 1.53
TRABD-201ENST00000303434 FRAT1Q92837 279 aaPredicted RBP24.59■■□□□ 1.53
TRABD-201ENST00000303434 EIF2AK4Q9P2K8 1649 aaKnown RBP24.59■■□□□ 1.53
TRABD-201ENST00000303434 TESK2Q96S53 571 aa24.58■■□□□ 1.53
TRABD-201ENST00000303434 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
TRABD-201ENST00000303434 PER1O15534 1290 aaPredicted RBP24.57■■□□□ 1.52
TRABD-201ENST00000303434 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
TRABD-201ENST00000303434 SPAG9O60271 1321 aaKnown RBP24.56■■□□□ 1.52
TRABD-201ENST00000303434 COL17A1Q9UMD9 1497 aaPredicted RBP24.55■■□□□ 1.52
TRABD-201ENST00000303434 PARD3Q8TEW0 1356 aa24.55■■□□□ 1.52
TRABD-201ENST00000303434 PODXL2Q9NZ53 605 aa24.55■■□□□ 1.52
TRABD-201ENST00000303434 AFAP1Q8N556 730 aa24.54■■□□□ 1.52
TRABD-201ENST00000303434 DISP3Q9P2K9 1392 aa24.54■■□□□ 1.52
TRABD-201ENST00000303434 PDE4AP27815 886 aa24.53■■□□□ 1.52
TRABD-201ENST00000303434 NFKBIBQ15653 356 aa24.53■■□□□ 1.52
TRABD-201ENST00000303434 NLRP13Q86W25 1043 aa24.53■■□□□ 1.52
TRABD-201ENST00000303434 DDRGK1Q96HY6 314 aa24.53■■□□□ 1.52
TRABD-201ENST00000303434 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
TRABD-201ENST00000303434 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.52
TRABD-201ENST00000303434 BACH2Q9BYV9 841 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms