RNA–Protein interactions for RNA: ENST00000301765.9

VPS37C-201, Transcript of VPS37C, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37C, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-201ENST00000301765 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
VPS37C-201ENST00000301765 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
VPS37C-201ENST00000301765 UBE2Q2Q8WVN8 375 aa22.47■■□□□ 1.19
VPS37C-201ENST00000301765 CDC42BPAQ5VT25 1732 aa22.46■■□□□ 1.19
VPS37C-201ENST00000301765 TMC1Q8TDI8 760 aa22.45■■□□□ 1.18
VPS37C-201ENST00000301765 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
VPS37C-201ENST00000301765 PNISRQ8TF01 805 aaKnown RBP22.44■■□□□ 1.18
VPS37C-201ENST00000301765 SKAP1Q86WV1 359 aa22.43■■□□□ 1.18
VPS37C-201ENST00000301765 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
VPS37C-201ENST00000301765 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
VPS37C-201ENST00000301765 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
VPS37C-201ENST00000301765 SLC4A3P48751 1232 aa22.4■■□□□ 1.18
VPS37C-201ENST00000301765 MBD5Q9P267 1494 aa22.4■■□□□ 1.18
VPS37C-201ENST00000301765 ADGRL2O95490 1459 aa22.39■■□□□ 1.18
VPS37C-201ENST00000301765 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
VPS37C-201ENST00000301765 ADCY10Q96PN6 1610 aa22.38■■□□□ 1.17
VPS37C-201ENST00000301765 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
VPS37C-201ENST00000301765 EXOC6Q8TAG9 804 aa22.37■■□□□ 1.17
VPS37C-201ENST00000301765 CHD1O14646 1710 aa22.37■■□□□ 1.17
VPS37C-201ENST00000301765 PDE4AP27815 886 aa22.35■■□□□ 1.17
VPS37C-201ENST00000301765 CROCC2H7BZ55 1655 aa22.32■■□□□ 1.16
VPS37C-201ENST00000301765 ADGBQ8N7X0 1667 aa22.32■■□□□ 1.16
VPS37C-201ENST00000301765 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
VPS37C-201ENST00000301765 AFAP1Q8N556 730 aa22.3■■□□□ 1.16
VPS37C-201ENST00000301765 SYCP2Q9BX26 1530 aa22.3■■□□□ 1.16
VPS37C-201ENST00000301765 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
VPS37C-201ENST00000301765 WASHC2CQ9Y4E1 1318 aa22.28■■□□□ 1.16
VPS37C-201ENST00000301765 TTC37Q6PGP7 1564 aa22.28■■□□□ 1.16
VPS37C-201ENST00000301765 CDC42BPBQ9Y5S2 1711 aa22.28■■□□□ 1.16
VPS37C-201ENST00000301765 GSE1Q14687 1217 aa22.28■■□□□ 1.16
VPS37C-201ENST00000301765 POLR1AO95602 1720 aaPredicted RBP22.28■■□□□ 1.16
VPS37C-201ENST00000301765 CDCA7LQ96GN5 454 aa22.28■■□□□ 1.16
VPS37C-201ENST00000301765 FRAT1Q92837 279 aaPredicted RBP22.27■■□□□ 1.16
VPS37C-201ENST00000301765 PLIN1O60240 522 aa22.27■■□□□ 1.16
VPS37C-201ENST00000301765 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
VPS37C-201ENST00000301765 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
VPS37C-201ENST00000301765 USP35Q9P2H5 1018 aa22.26■■□□□ 1.15
VPS37C-201ENST00000301765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.25■■□□□ 1.152e-7■■■□□ 19.1
VPS37C-201ENST00000301765 CCDC141Q6ZP82 1450 aa22.25■■□□□ 1.15
VPS37C-201ENST00000301765 KDM5CP41229 1560 aa22.25■■□□□ 1.15
VPS37C-201ENST00000301765 ARHGEF12Q9NZN5 1544 aa22.25■■□□□ 1.15
VPS37C-201ENST00000301765 PPM1GO15355 546 aaPredicted RBP22.24■■□□□ 1.15
VPS37C-201ENST00000301765 NFKBIBQ15653 356 aa22.22■■□□□ 1.15
VPS37C-201ENST00000301765 BACH2Q9BYV9 841 aa22.22■■□□□ 1.15
VPS37C-201ENST00000301765 RCAN3Q9UKA8 241 aa22.22■■□□□ 1.15
VPS37C-201ENST00000301765 ROCK2O75116 1388 aaKnown RBP22.21■■□□□ 1.15
VPS37C-201ENST00000301765 SHANK2Q9UPX8 1470 aa22.2■■□□□ 1.14
VPS37C-201ENST00000301765 MYBBP1AQ9BQG0 1328 aaKnown RBP22.2■■□□□ 1.14
VPS37C-201ENST00000301765 FAM135AQ9P2D6 1515 aa22.19■■□□□ 1.14
VPS37C-201ENST00000301765 PLA2R1Q13018 1463 aa22.19■■□□□ 1.14
VPS37C-201ENST00000301765 LRPPRCP42704 1394 aaKnown RBP22.19■■□□□ 1.14
VPS37C-201ENST00000301765 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
VPS37C-201ENST00000301765 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
VPS37C-201ENST00000301765 TRAPPC8Q9Y2L5 1435 aa22.17■■□□□ 1.14
VPS37C-201ENST00000301765 CCDC144AA2RUR9 1427 aa22.16■■□□□ 1.14
VPS37C-201ENST00000301765 EFCAB2Q5VUJ9 269 aa22.15■■□□□ 1.14
VPS37C-201ENST00000301765 PREX2Q70Z35 1606 aa22.14■■□□□ 1.13
VPS37C-201ENST00000301765 RSPH4AQ5TD94 716 aa22.14■■□□□ 1.13
VPS37C-201ENST00000301765 DAXXQ9UER7 740 aaPredicted RBP22.14■■□□□ 1.13
VPS37C-201ENST00000301765 ARID4BQ4LE39 1312 aaPredicted RBP22.13■■□□□ 1.13
VPS37C-201ENST00000301765 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
VPS37C-201ENST00000301765 RALGAPBQ86X10 1494 aa22.13■■□□□ 1.13
VPS37C-201ENST00000301765 ABCC2Q92887 1545 aa22.12■■□□□ 1.13
VPS37C-201ENST00000301765 ARHGEF5Q12774 1597 aa22.12■■□□□ 1.13
VPS37C-201ENST00000301765 RALBP1Q15311 655 aa22.12■■□□□ 1.13
VPS37C-201ENST00000301765 UHRF1BP1Q6BDS2 1440 aa22.11■■□□□ 1.13
VPS37C-201ENST00000301765 FRAT2O75474 233 aaPredicted RBP22.09■■□□□ 1.13
VPS37C-201ENST00000301765 ARXQ96QS3 562 aa22.09■■□□□ 1.13
VPS37C-201ENST00000301765 CRBNQ96SW2 442 aa22.08■■□□□ 1.13
VPS37C-201ENST00000301765 C20orf194Q5TEA3 1177 aa22.08■■□□□ 1.12
VPS37C-201ENST00000301765 NLRP13Q86W25 1043 aa22.08■■□□□ 1.12
VPS37C-201ENST00000301765 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
VPS37C-201ENST00000301765 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
VPS37C-201ENST00000301765 PLCH2O75038 1416 aa22.06■■□□□ 1.12
VPS37C-201ENST00000301765 SENP3Q9H4L4 574 aaPredicted RBP22.05■■□□□ 1.12
VPS37C-201ENST00000301765 PRAG1Q86YV5 1406 aa22.05■■□□□ 1.12
VPS37C-201ENST00000301765 KDM5DQ9BY66 1539 aa22.05■■□□□ 1.12
VPS37C-201ENST00000301765 A2MP01023 1474 aa22.05■■□□□ 1.12
VPS37C-201ENST00000301765 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
VPS37C-201ENST00000301765 PER1O15534 1290 aaPredicted RBP22.04■■□□□ 1.12
VPS37C-201ENST00000301765 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
VPS37C-201ENST00000301765 KIF3BO15066 747 aa22.02■■□□□ 1.12
VPS37C-201ENST00000301765 TESK2Q96S53 571 aa22.02■■□□□ 1.12
VPS37C-201ENST00000301765 PKNOX2Q96KN3 472 aa22.02■■□□□ 1.12
VPS37C-201ENST00000301765 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.11
VPS37C-201ENST00000301765 PANK3Q9H999 370 aa22.01■■□□□ 1.11
VPS37C-201ENST00000301765 DDRGK1Q96HY6 314 aa22.01■■□□□ 1.11
VPS37C-201ENST00000301765 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
VPS37C-201ENST00000301765 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
VPS37C-201ENST00000301765 MS4A1P11836 297 aa21.97■■□□□ 1.11
VPS37C-201ENST00000301765 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
VPS37C-201ENST00000301765 SCAPERQ9BY12 1400 aa21.95■■□□□ 1.11
VPS37C-201ENST00000301765 ADAMTS8Q9UP79 889 aa21.94■■□□□ 1.1
VPS37C-201ENST00000301765 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
VPS37C-201ENST00000301765 PDE3BQ13370 1112 aa21.93■■□□□ 1.1
VPS37C-201ENST00000301765 RGS3P49796 1198 aa21.91■■□□□ 1.1
VPS37C-201ENST00000301765 E9PCH4 1651 aa21.91■■□□□ 1.1
VPS37C-201ENST00000301765 VSIG10Q8N0Z9 540 aa21.9■■□□□ 1.1
VPS37C-201ENST00000301765 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
VPS37C-201ENST00000301765 CHGAP10645 457 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms