RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 GOLGA6L3A6NEY3 463 aa18.71■□□□□ 0.59
CDT1-201ENST00000301019 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
CDT1-201ENST00000301019 MPHOSPH9Q99550 1183 aa18.7■□□□□ 0.58
CDT1-201ENST00000301019 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
CDT1-201ENST00000301019 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
CDT1-201ENST00000301019 RAPGEF6Q8TEU7 1601 aa18.69■□□□□ 0.58
CDT1-201ENST00000301019 CC2D1BQ5T0F9 858 aaKnown RBP18.69■□□□□ 0.58
CDT1-201ENST00000301019 NCOA1Q15788 1441 aa18.69■□□□□ 0.58
CDT1-201ENST00000301019 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
CDT1-201ENST00000301019 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
CDT1-201ENST00000301019 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
CDT1-201ENST00000301019 PTPRGP23470 1445 aa18.67■□□□□ 0.58
CDT1-201ENST00000301019 L1TD1Q5T7N2 865 aaKnown RBP18.66■□□□□ 0.58
CDT1-201ENST00000301019 PRDM10Q9NQV6 1147 aa18.65■□□□□ 0.58
CDT1-201ENST00000301019 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
CDT1-201ENST00000301019 ERBB4Q15303 1308 aa18.64■□□□□ 0.57
CDT1-201ENST00000301019 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.57
CDT1-201ENST00000301019 NCOA2Q15596 1464 aa18.64■□□□□ 0.57
CDT1-201ENST00000301019 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
CDT1-201ENST00000301019 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
CDT1-201ENST00000301019 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
CDT1-201ENST00000301019 SLC4A1APQ9BWU0 796 aaKnown RBP18.62■□□□□ 0.57
CDT1-201ENST00000301019 EHBP1L1Q8N3D4 1523 aa18.62■□□□□ 0.57
CDT1-201ENST00000301019 ZHX1Q9UKY1 873 aaPredicted RBP18.61■□□□□ 0.57
CDT1-201ENST00000301019 ABCA8O94911 1581 aa18.61■□□□□ 0.57
CDT1-201ENST00000301019 TRIM44Q96DX7 344 aaPredicted RBP18.61■□□□□ 0.57
CDT1-201ENST00000301019 CLCN1P35523 988 aa18.6■□□□□ 0.57
CDT1-201ENST00000301019 DHX29Q7Z478 1369 aaKnown RBP18.59■□□□□ 0.57
CDT1-201ENST00000301019 KDM5BQ9UGL1 1544 aa18.59■□□□□ 0.57
CDT1-201ENST00000301019 MYH16Q9H6N6 1097 aa18.58■□□□□ 0.57
CDT1-201ENST00000301019 NAIPQ13075 1403 aa18.57■□□□□ 0.56
CDT1-201ENST00000301019 ESPNB1AK53 854 aa18.57■□□□□ 0.56
CDT1-201ENST00000301019 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
CDT1-201ENST00000301019 SUPT6HQ7KZ85 1726 aaKnown RBP18.55■□□□□ 0.56
CDT1-201ENST00000301019 FGD6Q6ZV73 1430 aa18.54■□□□□ 0.56
CDT1-201ENST00000301019 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
CDT1-201ENST00000301019 FOXD4L1Q9NU39 408 aa18.53■□□□□ 0.56
CDT1-201ENST00000301019 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
CDT1-201ENST00000301019 CENPQQ7L2Z9 268 aaPredicted RBP18.53■□□□□ 0.56
CDT1-201ENST00000301019 BECN1Q14457 450 aa18.53■□□□□ 0.56
CDT1-201ENST00000301019 CARD11Q9BXL7 1154 aa18.53■□□□□ 0.56
CDT1-201ENST00000301019 ATP10BO94823 1461 aa18.53■□□□□ 0.56
CDT1-201ENST00000301019 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CDT1-201ENST00000301019 USP47Q96K76 1375 aa18.51■□□□□ 0.55
CDT1-201ENST00000301019 TRAK2O60296 914 aa18.51■□□□□ 0.55
CDT1-201ENST00000301019 MYOM3Q5VTT5 1437 aa18.5■□□□□ 0.55
CDT1-201ENST00000301019 HFM1A2PYH4 1435 aa18.5■□□□□ 0.55
CDT1-201ENST00000301019 IGHDP01880 384 aa18.49■□□□□ 0.55
CDT1-201ENST00000301019 AAMPQ13685 434 aa18.49■□□□□ 0.55
CDT1-201ENST00000301019 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
CDT1-201ENST00000301019 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
CDT1-201ENST00000301019 BCAR3O75815 825 aa18.48■□□□□ 0.55
CDT1-201ENST00000301019 KDM2BQ8NHM5 1336 aa18.48■□□□□ 0.55
CDT1-201ENST00000301019 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
CDT1-201ENST00000301019 PLEKHD1A6NEE1 506 aa18.47■□□□□ 0.55
CDT1-201ENST00000301019 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
CDT1-201ENST00000301019 TBC1D2Q9BYX2 928 aa18.47■□□□□ 0.55
CDT1-201ENST00000301019 ABCC2Q92887 1545 aa18.46■□□□□ 0.55
CDT1-201ENST00000301019 GRPEL1Q9HAV7 217 aa18.46■□□□□ 0.55
CDT1-201ENST00000301019 USP19O94966 1318 aa18.46■□□□□ 0.55
CDT1-201ENST00000301019 MCM4P33991 863 aa18.46■□□□□ 0.55
CDT1-201ENST00000301019 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
CDT1-201ENST00000301019 R3HCC1Q9Y3T6 440 aaKnown RBP18.45■□□□□ 0.54
CDT1-201ENST00000301019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.44■□□□□ 0.541e-7■■■□□ 16.2
CDT1-201ENST00000301019 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
CDT1-201ENST00000301019 PDCL3Q9H2J4 239 aa18.42■□□□□ 0.54
CDT1-201ENST00000301019 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
CDT1-201ENST00000301019 GAS2L3Q86XJ1 694 aa18.42■□□□□ 0.54
CDT1-201ENST00000301019 PRDM4Q9UKN5 801 aa18.42■□□□□ 0.54
CDT1-201ENST00000301019 COG6Q9Y2V7 657 aa18.42■□□□□ 0.54
CDT1-201ENST00000301019 ADAMTS8Q9UP79 889 aa18.42■□□□□ 0.54
CDT1-201ENST00000301019 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
CDT1-201ENST00000301019 UHRF1BP1LA0JNW5 1464 aa18.41■□□□□ 0.54
CDT1-201ENST00000301019 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
CDT1-201ENST00000301019 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
CDT1-201ENST00000301019 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
CDT1-201ENST00000301019 KIF14Q15058 1648 aa18.39■□□□□ 0.53
CDT1-201ENST00000301019 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.53
CDT1-201ENST00000301019 MIA2Q96PC5 1412 aa18.39■□□□□ 0.53
CDT1-201ENST00000301019 MRE11P49959 708 aa18.38■□□□□ 0.53
CDT1-201ENST00000301019 FGD1P98174 961 aa18.38■□□□□ 0.53
CDT1-201ENST00000301019 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
CDT1-201ENST00000301019 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
CDT1-201ENST00000301019 ADCY10Q96PN6 1610 aa18.37■□□□□ 0.53
CDT1-201ENST00000301019 FSD2A1L4K1 749 aa18.37■□□□□ 0.53
CDT1-201ENST00000301019 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
CDT1-201ENST00000301019 MPNDQ8N594 471 aa18.37■□□□□ 0.53
CDT1-201ENST00000301019 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
CDT1-201ENST00000301019 JARID2Q92833 1246 aaPredicted RBP18.37■□□□□ 0.53
CDT1-201ENST00000301019 KIF15Q9NS87 1388 aa18.37■□□□□ 0.53
CDT1-201ENST00000301019 PDE3BQ13370 1112 aa18.36■□□□□ 0.53
CDT1-201ENST00000301019 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
CDT1-201ENST00000301019 ZNF644Q9H582 1327 aaPredicted RBP18.36■□□□□ 0.53
CDT1-201ENST00000301019 PDE4CQ08493 712 aa18.36■□□□□ 0.53
CDT1-201ENST00000301019 SPATA31E1Q6ZUB1 1445 aa18.35■□□□□ 0.53
CDT1-201ENST00000301019 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
CDT1-201ENST00000301019 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
CDT1-201ENST00000301019 LRPPRCP42704 1394 aaKnown RBP18.34■□□□□ 0.53
CDT1-201ENST00000301019 NCLP19338 710 aaKnown RBP18.34■□□□□ 0.53
CDT1-201ENST00000301019 XPCQ01831 940 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms