RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
SNAPC4-201ENST00000298532 NAP1L2Q9ULW6 460 aaPredicted RBP20.66■□□□□ 0.9
SNAPC4-201ENST00000298532 PRG4Q92954 1404 aaPredicted RBP20.65■□□□□ 0.9
SNAPC4-201ENST00000298532 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
SNAPC4-201ENST00000298532 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
SNAPC4-201ENST00000298532 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.9
SNAPC4-201ENST00000298532 AMER1Q5JTC6 1135 aaPredicted RBP20.64■□□□□ 0.89
SNAPC4-201ENST00000298532 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 HDGFL2Q7Z4V5 671 aaPredicted RBP20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 KIAA1211Q6ZU35 1233 aa20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 CENPJQ9HC77 1338 aaPredicted RBP20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNAPC4-201ENST00000298532 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
SNAPC4-201ENST00000298532 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
SNAPC4-201ENST00000298532 KIF15Q9NS87 1388 aa20.61■□□□□ 0.89
SNAPC4-201ENST00000298532 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
SNAPC4-201ENST00000298532 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
SNAPC4-201ENST00000298532 EXOC6Q8TAG9 804 aa20.6■□□□□ 0.89
SNAPC4-201ENST00000298532 APBB1O00213 710 aa20.6■□□□□ 0.89
SNAPC4-201ENST00000298532 UACAQ9BZF9 1416 aa20.6■□□□□ 0.89
SNAPC4-201ENST00000298532 TAOK2Q9UL54 1235 aa20.59■□□□□ 0.89
SNAPC4-201ENST00000298532 HTATSF1O43719 755 aaKnown RBP20.58■□□□□ 0.88
SNAPC4-201ENST00000298532 SMC4Q9NTJ3 1288 aa20.58■□□□□ 0.88
SNAPC4-201ENST00000298532 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
SNAPC4-201ENST00000298532 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
SNAPC4-201ENST00000298532 SKOR2Q2VWA4 1001 aaPredicted RBP20.56■□□□□ 0.88
SNAPC4-201ENST00000298532 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
SNAPC4-201ENST00000298532 MYOM3Q5VTT5 1437 aa20.55■□□□□ 0.88
SNAPC4-201ENST00000298532 TNNT3P45378 269 aaPredicted RBP20.54■□□□□ 0.88
SNAPC4-201ENST00000298532 STK26Q9P289 416 aa20.54■□□□□ 0.88
SNAPC4-201ENST00000298532 ERICH3Q5RHP9 1530 aa20.54■□□□□ 0.88
SNAPC4-201ENST00000298532 PHF14O94880 888 aa20.53■□□□□ 0.88
SNAPC4-201ENST00000298532 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
SNAPC4-201ENST00000298532 TOP2BQ02880 1626 aa20.52■□□□□ 0.88
SNAPC4-201ENST00000298532 CSPP1Q1MSJ5 1256 aa20.52■□□□□ 0.88
SNAPC4-201ENST00000298532 CUX1P39880 1505 aa20.51■□□□□ 0.87
SNAPC4-201ENST00000298532 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
SNAPC4-201ENST00000298532 CRBNQ96SW2 442 aa20.51■□□□□ 0.87
SNAPC4-201ENST00000298532 ST18O60284 1047 aa20.5■□□□□ 0.87
SNAPC4-201ENST00000298532 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
SNAPC4-201ENST00000298532 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
SNAPC4-201ENST00000298532 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
SNAPC4-201ENST00000298532 PLIN1O60240 522 aa20.49■□□□□ 0.87
SNAPC4-201ENST00000298532 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNAPC4-201ENST00000298532 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
SNAPC4-201ENST00000298532 EFCAB5A4FU69 1503 aa20.48■□□□□ 0.87
SNAPC4-201ENST00000298532 HMMRO75330 724 aa20.47■□□□□ 0.87
SNAPC4-201ENST00000298532 PEG3Q9GZU2 1588 aa20.47■□□□□ 0.87
SNAPC4-201ENST00000298532 CASKIN1Q8WXD9 1431 aa20.47■□□□□ 0.87
SNAPC4-201ENST00000298532 TPM4P67936 248 aa20.45■□□□□ 0.86
SNAPC4-201ENST00000298532 SAFB2Q14151 953 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNAPC4-201ENST00000298532 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
SNAPC4-201ENST00000298532 MAGI1Q96QZ7 1491 aaPredicted RBP20.45■□□□□ 0.86
SNAPC4-201ENST00000298532 KIAA0586Q9BVV6 1533 aa20.45■□□□□ 0.86
SNAPC4-201ENST00000298532 TERF2IPQ9NYB0 399 aa20.44■□□□□ 0.86
SNAPC4-201ENST00000298532 PLEKHH2Q8IVE3 1493 aa20.44■□□□□ 0.86
SNAPC4-201ENST00000298532 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
SNAPC4-201ENST00000298532 GNL2Q13823 731 aaKnown RBP20.44■□□□□ 0.86
SNAPC4-201ENST00000298532 STAC3Q96MF2 364 aa20.44■□□□□ 0.86
SNAPC4-201ENST00000298532 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
SNAPC4-201ENST00000298532 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
SNAPC4-201ENST00000298532 E9PSI1 815 aa20.42■□□□□ 0.86
SNAPC4-201ENST00000298532 CHMP5Q9NZZ3 219 aa20.42■□□□□ 0.86
SNAPC4-201ENST00000298532 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
SNAPC4-201ENST00000298532 NFKBIBQ15653 356 aa20.41■□□□□ 0.86
SNAPC4-201ENST00000298532 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
SNAPC4-201ENST00000298532 TRIM6-TRIM34B2RNG4 842 aa20.4■□□□□ 0.86
SNAPC4-201ENST00000298532 KIF21BO75037 1637 aa20.4■□□□□ 0.86
SNAPC4-201ENST00000298532 CHMP4AQ9BY43 222 aa20.39■□□□□ 0.85
SNAPC4-201ENST00000298532 FYCO1Q9BQS8 1478 aa20.38■□□□□ 0.85
SNAPC4-201ENST00000298532 PANK3Q9H999 370 aa20.37■□□□□ 0.85
SNAPC4-201ENST00000298532 NGDNQ8NEJ9 315 aaKnown RBP20.37■□□□□ 0.85
SNAPC4-201ENST00000298532 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
SNAPC4-201ENST00000298532 STK31Q9BXU1 1019 aa20.37■□□□□ 0.85
SNAPC4-201ENST00000298532 NPHP1O15259 732 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 POGZQ7Z3K3 1410 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 ARHGAP5Q13017 1502 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 SOX12O15370 315 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 ZKSCAN2Q63HK3 967 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 GOLGA6L1Q8N7Z2 621 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 USP47Q96K76 1375 aa20.36■□□□□ 0.85
SNAPC4-201ENST00000298532 TULP1O00294 542 aaPredicted RBP20.35■□□□□ 0.85
SNAPC4-201ENST00000298532 COG6Q9Y2V7 657 aa20.35■□□□□ 0.85
SNAPC4-201ENST00000298532 FAM43AQ8N2R8 423 aa20.35■□□□□ 0.85
SNAPC4-201ENST00000298532 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.35■□□□□ 0.85
SNAPC4-201ENST00000298532 FOXD4L5Q5VV16 416 aaPredicted RBP20.34■□□□□ 0.85
SNAPC4-201ENST00000298532 FOXD4L4Q8WXT5 416 aaPredicted RBP20.34■□□□□ 0.85
SNAPC4-201ENST00000298532 GPATCH3Q96I76 525 aa20.33■□□□□ 0.85
SNAPC4-201ENST00000298532 KIF16BQ96L93 1317 aa20.33■□□□□ 0.84
SNAPC4-201ENST00000298532 ATP6V1DQ9Y5K8 247 aa20.32■□□□□ 0.84
SNAPC4-201ENST00000298532 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
SNAPC4-201ENST00000298532 NGEFQ8N5V2 710 aa20.32■□□□□ 0.84
SNAPC4-201ENST00000298532 FAM13BQ9NYF5 915 aa20.32■□□□□ 0.84
SNAPC4-201ENST00000298532 PRXQ9BXM0 1461 aa20.31■□□□□ 0.84
SNAPC4-201ENST00000298532 CCDC34Q96HJ3 373 aa20.31■□□□□ 0.84
SNAPC4-201ENST00000298532 ANKRD45Q5TZF3 282 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms