RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 ZNF644Q9H582 1327 aaPredicted RBP10.31□□□□□ -0.76
CD53-201ENST00000271324 A2MP01023 1474 aa10.31□□□□□ -0.76
CD53-201ENST00000271324 SOCS7O14512 581 aa10.3□□□□□ -0.76
CD53-201ENST00000271324 GGT6Q6P531 493 aa10.3□□□□□ -0.76
CD53-201ENST00000271324 CEP170BQ9Y4F5 1589 aaPredicted RBP10.29□□□□□ -0.76
CD53-201ENST00000271324 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
CD53-201ENST00000271324 CFDP1Q9UEE9 299 aaPredicted RBP10.29□□□□□ -0.76
CD53-201ENST00000271324 TIAM1Q13009 1591 aa10.29□□□□□ -0.76
CD53-201ENST00000271324 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
CD53-201ENST00000271324 IQSEC2Q5JU85 1478 aa10.28□□□□□ -0.76
CD53-201ENST00000271324 DNMT1P26358 1616 aaKnown RBP10.27□□□□□ -0.76
CD53-201ENST00000271324 KIAA1107Q9UPP5 1409 aa10.27□□□□□ -0.77
CD53-201ENST00000271324 POLR1AO95602 1720 aaPredicted RBP10.26□□□□□ -0.77
CD53-201ENST00000271324 TCOF1Q13428 1488 aaKnown RBP10.26□□□□□ -0.77
CD53-201ENST00000271324 UBAP1LF5GYI3 381 aa10.26□□□□□ -0.77
CD53-201ENST00000271324 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
CD53-201ENST00000271324 PLEKHH2Q8IVE3 1493 aa10.26□□□□□ -0.77
CD53-201ENST00000271324 PLA2R1Q13018 1463 aa10.25□□□□□ -0.77
CD53-201ENST00000271324 MBD5Q9P267 1494 aa10.25□□□□□ -0.77
CD53-201ENST00000271324 FBXO31Q5XUX0 539 aaPredicted RBP10.24□□□□□ -0.77
CD53-201ENST00000271324 CFAP65Q6ZU64 1925 aaKnown RBP10.24□□□□□ -0.77
CD53-201ENST00000271324 PKD2Q13563 968 aa10.23□□□□□ -0.77
CD53-201ENST00000271324 NEURL4Q96JN8 1562 aa10.23□□□□□ -0.77
CD53-201ENST00000271324 PCGF6Q9BYE7 350 aa10.23□□□□□ -0.77
CD53-201ENST00000271324 A2ML1A8K2U0 1454 aa10.23□□□□□ -0.77
CD53-201ENST00000271324 EHBP1L1Q8N3D4 1523 aa10.22□□□□□ -0.77
CD53-201ENST00000271324 DHX29Q7Z478 1369 aaKnown RBP10.2□□□□□ -0.78
CD53-201ENST00000271324 KIF3BO15066 747 aa10.2□□□□□ -0.78
CD53-201ENST00000271324 NPM3O75607 178 aaKnown RBP10.2□□□□□ -0.78
CD53-201ENST00000271324 STRCP1A6NGW2 1772 aa10.2□□□□□ -0.78
CD53-201ENST00000271324 CAMSAP2Q08AD1 1489 aa10.2□□□□□ -0.78
CD53-201ENST00000271324 RTEL1-TNFRSF6BF6WH68 1400 aa10.2□□□□□ -0.78
CD53-201ENST00000271324 PIP4K2BP78356 416 aa10.19□□□□□ -0.78
CD53-201ENST00000271324 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
CD53-201ENST00000271324 HSPA1LP34931 641 aa10.18□□□□□ -0.78
CD53-201ENST00000271324 TNRQ92752 1358 aa10.18□□□□□ -0.78
CD53-201ENST00000271324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.18□□□□□ -0.78
CD53-201ENST00000271324 KDM5DQ9BY66 1539 aa10.18□□□□□ -0.78
CD53-201ENST00000271324 PZPP20742 1482 aa10.18□□□□□ -0.78
CD53-201ENST00000271324 NCOA2Q15596 1464 aa10.18□□□□□ -0.78
CD53-201ENST00000271324 CCDC141Q6ZP82 1450 aa10.18□□□□□ -0.78
CD53-201ENST00000271324 VWDEQ8N2E2 1590 aa10.17□□□□□ -0.78
CD53-201ENST00000271324 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
CD53-201ENST00000271324 ALKQ9UM73 1620 aa10.17□□□□□ -0.78
CD53-201ENST00000271324 MED1Q15648 1581 aaPredicted RBP10.17□□□□□ -0.78
CD53-201ENST00000271324 WASHC2CQ9Y4E1 1318 aa10.16□□□□□ -0.78
CD53-201ENST00000271324 ZEB1P37275 1124 aaPredicted RBP10.16□□□□□ -0.78
CD53-201ENST00000271324 CEP152O94986 1710 aa10.15□□□□□ -0.78
CD53-201ENST00000271324 IQGAP1P46940 1657 aa10.15□□□□□ -0.78
CD53-201ENST00000271324 UGGT1Q9NYU2 1555 aa10.15□□□□□ -0.79
CD53-201ENST00000271324 MIA2Q96PC5 1412 aa10.14□□□□□ -0.79
CD53-201ENST00000271324 CPS1P31327 1500 aa10.14□□□□□ -0.79
CD53-201ENST00000271324 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
CD53-201ENST00000271324 ARHGEF5Q12774 1597 aa10.14□□□□□ -0.79
CD53-201ENST00000271324 DEPDC5O75140 1603 aa10.14□□□□□ -0.79
CD53-201ENST00000271324 RNF17Q9BXT8 1623 aaKnown RBP10.14□□□□□ -0.79
CD53-201ENST00000271324 ANKLE2Q86XL3 938 aa10.13□□□□□ -0.79
CD53-201ENST00000271324 XIRP1Q702N8 1843 aaKnown RBP10.12□□□□□ -0.79
CD53-201ENST00000271324 NPHP4O75161 1426 aaPredicted RBP10.12□□□□□ -0.79
CD53-201ENST00000271324 ZC3H13Q5T200 1668 aaKnown RBP10.12□□□□□ -0.79
CD53-201ENST00000271324 MED14O60244 1454 aa10.12□□□□□ -0.79
CD53-201ENST00000271324 TOM1O60784 492 aa10.12□□□□□ -0.79
CD53-201ENST00000271324 THEMISQ8N1K5 641 aaPredicted RBP10.12□□□□□ -0.79
CD53-201ENST00000271324 UBR1Q8IWV7 1749 aa10.12□□□□□ -0.79
CD53-201ENST00000271324 MROH1Q8NDA8 1641 aa10.12□□□□□ -0.79
CD53-201ENST00000271324 ABCC3O15438 1527 aa10.11□□□□□ -0.79
CD53-201ENST00000271324 FAM135AQ9P2D6 1515 aa10.11□□□□□ -0.79
CD53-201ENST00000271324 NLRP1Q9C000 1473 aa10.11□□□□□ -0.79
CD53-201ENST00000271324 TSPY4P0CV99 314 aa10.1□□□□□ -0.79
CD53-201ENST00000271324 TSPY10P0CW01 314 aa10.1□□□□□ -0.79
CD53-201ENST00000271324 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
CD53-201ENST00000271324 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
CD53-201ENST00000271324 LRRC7Q96NW7 1537 aa10.09□□□□□ -0.79
CD53-201ENST00000271324 RSPH4AQ5TD94 716 aa10.09□□□□□ -0.79
CD53-201ENST00000271324 EIF2AK4Q9P2K8 1649 aaKnown RBP10.09□□□□□ -0.79
CD53-201ENST00000271324 LRRC9Q6ZRR7 1453 aa10.09□□□□□ -0.79
CD53-201ENST00000271324 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
CD53-201ENST00000271324 ERVK-7P63135 1459 aa10.08□□□□□ -0.8
CD53-201ENST00000271324 LOC105371045A0A1W2PR82 267 aa10.07□□□□□ -0.8
CD53-201ENST00000271324 LTKP29376 864 aa10.06□□□□□ -0.8
CD53-201ENST00000271324 SYNMO15061 1565 aa10.06□□□□□ -0.8
CD53-201ENST00000271324 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
CD53-201ENST00000271324 PIK3C2BO00750 1634 aa10.05□□□□□ -0.8
CD53-201ENST00000271324 TRIM26Q12899 539 aaPredicted RBP10.05□□□□□ -0.8
CD53-201ENST00000271324 VPS8Q8N3P4 1428 aa10.04□□□□□ -0.8
CD53-201ENST00000271324 DSG3P32926 999 aa10.03□□□□□ -0.8
CD53-201ENST00000271324 SCAF11Q99590 1463 aaKnown RBP10.03□□□□□ -0.8
CD53-201ENST00000271324 DUOX2Q9NRD8 1548 aa10.03□□□□□ -0.8
CD53-201ENST00000271324 MYOM3Q5VTT5 1437 aa10.02□□□□□ -0.8
CD53-201ENST00000271324 SLIT1O75093 1534 aa10.02□□□□□ -0.81
CD53-201ENST00000271324 PRDM15P57071 1507 aaPredicted RBP10.02□□□□□ -0.81
CD53-201ENST00000271324 ARHGAP23Q9P227 1491 aa10.02□□□□□ -0.81
CD53-201ENST00000271324 TXNDC2Q86VQ3 553 aa10.02□□□□□ -0.81
CD53-201ENST00000271324 RRP7BPQ9NSQ0 103 aa10.02□□□□□ -0.81
CD53-201ENST00000271324 RGS17Q9UGC6 210 aaPredicted RBP10.02□□□□□ -0.81
CD53-201ENST00000271324 MYO5BQ9ULV0 1848 aa10.01□□□□□ -0.81
CD53-201ENST00000271324 PTPN23Q9H3S7 1636 aa10.01□□□□□ -0.81
CD53-201ENST00000271324 ABCC5O15440 1437 aa10□□□□□ -0.81
CD53-201ENST00000271324 KIF15Q9NS87 1388 aa10□□□□□ -0.81
CD53-201ENST00000271324 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms