RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.86□□□□□ -1.312e-10■■■■■ 208.9
CD53-201ENST00000271324 U2AF1Q01081 240 aaKnown RBP eCLIP8.44□□□□□ -1.061e-14■■■■■ 49.2
CD53-201ENST00000271324 EFTUD2Q15029 972 aaKnown RBP eCLIP6.56□□□□□ -1.362e-7■■■■■ 41.6
CD53-201ENST00000271324 PABPC4Q13310 644 aaKnown RBP eCLIP7.78□□□□□ -1.163e-7■■■■■ 40.5
CD53-201ENST00000271324 TARDBPQ13148 414 aaKnown RBP eCLIP6.58□□□□□ -1.361e-7■■■■■ 35.7
CD53-201ENST00000271324 RBM22Q9NW64 420 aaKnown RBP eCLIP6.2□□□□□ -1.422e-7■■■■■ 31.5
CD53-201ENST00000271324 SND1Q7KZF4 910 aaKnown RBP eCLIP7.1□□□□□ -1.274e-9■■■■□ 22
CD53-201ENST00000271324 U2AF2P26368 475 aaKnown RBP eCLIP7.62□□□□□ -1.198e-21■■■■□ 21.4
CD53-201ENST00000271324 SF3B4Q15427 424 aaKnown RBP eCLIP6.39□□□□□ -1.396e-8■■■■□ 19.5
CD53-201ENST00000271324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.7□□□□□ -1.342e-6■■■□□ 19.2
CD53-201ENST00000271324 DDX3XO00571 662 aaKnown RBP eCLIP6.74□□□□□ -1.332e-7■■■□□ 18.3
CD53-201ENST00000271324 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.41□□□□□ -1.222e-6■■■□□ 18.3
CD53-201ENST00000271324 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.39□□□□□ -1.391e-8■■■□□ 17.6
CD53-201ENST00000271324 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.513e-7■■■□□ 16.8
CD53-201ENST00000271324 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.71□□□□□ -1.182e-8■■■□□ 16.2
CD53-201ENST00000271324 RPS3P23396 243 aaKnown RBP eCLIP6.15□□□□□ -1.424e-7■■□□□ 13.9
CD53-201ENST00000271324 ZC3H11AO75152 810 aaKnown RBP eCLIP7.13□□□□□ -1.277e-6■■□□□ 13.7
CD53-201ENST00000271324 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.08□□□□□ -1.442e-12■■□□□ 11.9
CD53-201ENST00000271324 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.66□□□□□ -1.51e-6■■□□□ 11.4
CD53-201ENST00000271324 GPKOWQ92917 476 aaPredicted RBP eCLIP7.39□□□□□ -1.233e-7■□□□□ 9.9
CD53-201ENST00000271324 YBX3P16989 372 aaKnown RBP eCLIP8.95□□□□□ -0.984e-9■□□□□ 9.7
CD53-201ENST00000271324 RBFOX2O43251 390 aaKnown RBP eCLIP5.34□□□□□ -1.552e-6■□□□□ 9.5
CD53-201ENST00000271324 RBM15Q96T37 977 aaKnown RBP eCLIP6.67□□□□□ -1.348e-8■□□□□ 9
CD53-201ENST00000271324 HNRNPKP61978 463 aaKnown RBP eCLIP6.44□□□□□ -1.386e-6■□□□□ 9
CD53-201ENST00000271324 NOLC1Q14978 699 aaKnown RBP eCLIP7.69□□□□□ -1.181e-7■□□□□ 8.3
CD53-201ENST00000271324 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.61□□□□□ -1.192e-9■□□□□ 8
Retrieved 26 of 26 RNA–protein pairs in 6.7 ms