RNA–Protein interactions for RNA: ENST00000263774.8

NDUFS3-201, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFS3, Length 958 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-201ENST00000263774 FAM135AQ9P2D6 1515 aa33.23■■■□□ 2.91
NDUFS3-201ENST00000263774 PTPRKQ15262 1439 aa33.23■■■□□ 2.91
NDUFS3-201ENST00000263774 KIF15Q9NS87 1388 aa33.22■■■□□ 2.91
NDUFS3-201ENST00000263774 RNF17Q9BXT8 1623 aaKnown RBP33.22■■■□□ 2.91
NDUFS3-201ENST00000263774 FAM50AQ14320 339 aaKnown RBP33.22■■■□□ 2.91
NDUFS3-201ENST00000263774 KDM5DQ9BY66 1539 aa33.22■■■□□ 2.91
NDUFS3-201ENST00000263774 RRP7BPQ9NSQ0 103 aa33.21■■■□□ 2.91
NDUFS3-201ENST00000263774 WASHC2CQ9Y4E1 1318 aa33.21■■■□□ 2.91
NDUFS3-201ENST00000263774 PPARGC1BQ86YN6 1023 aaKnown RBP33.2■■■□□ 2.91
NDUFS3-201ENST00000263774 CHIC2Q9UKJ5 165 aa33.19■■■□□ 2.9
NDUFS3-201ENST00000263774 ANKRD30AQ9BXX3 1397 aa33.15■■■□□ 2.9
NDUFS3-201ENST00000263774 MROH1Q8NDA8 1641 aa33.13■■■□□ 2.89
NDUFS3-201ENST00000263774 ERBINQ96RT1 1412 aa33.13■■■□□ 2.89
NDUFS3-201ENST00000263774 NCOA1Q15788 1441 aa33.11■■■□□ 2.89
NDUFS3-201ENST00000263774 PZPP20742 1482 aa33.11■■■□□ 2.89
NDUFS3-201ENST00000263774 MYO3AQ8NEV4 1616 aa33.1■■■□□ 2.89
NDUFS3-201ENST00000263774 STRCQ7RTU9 1775 aa33.1■■■□□ 2.89
NDUFS3-201ENST00000263774 ABCC3O15438 1527 aa33.09■■■□□ 2.89
NDUFS3-201ENST00000263774 ADGRL2O95490 1459 aa33.09■■■□□ 2.89
NDUFS3-201ENST00000263774 ZC3H13Q5T200 1668 aaKnown RBP33.08■■■□□ 2.89
NDUFS3-201ENST00000263774 FBXO31Q5XUX0 539 aaPredicted RBP33.08■■■□□ 2.89
NDUFS3-201ENST00000263774 ZNF142P52746 1687 aaPredicted RBP33.05■■■□□ 2.88
NDUFS3-201ENST00000263774 CEP152O94986 1710 aa33.03■■■□□ 2.88
NDUFS3-201ENST00000263774 CEP170BQ9Y4F5 1589 aaPredicted RBP33.03■■■□□ 2.88
NDUFS3-201ENST00000263774 PRDM15P57071 1507 aaPredicted RBP33.02■■■□□ 2.88
NDUFS3-201ENST00000263774 TNRQ92752 1358 aa33.02■■■□□ 2.88
NDUFS3-201ENST00000263774 DEPDC5O75140 1603 aa33■■■□□ 2.87
NDUFS3-201ENST00000263774 CAMSAP1Q5T5Y3 1602 aa33■■■□□ 2.87
NDUFS3-201ENST00000263774 DMRT2Q9Y5R5 561 aa32.98■■■□□ 2.87
NDUFS3-201ENST00000263774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.97■■■□□ 2.87
NDUFS3-201ENST00000263774 A2ML1A8K2U0 1454 aa32.97■■■□□ 2.87
NDUFS3-201ENST00000263774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.96■■■□□ 2.87
NDUFS3-201ENST00000263774 ANKRD50Q9ULJ7 1429 aa32.92■■■□□ 2.86
NDUFS3-201ENST00000263774 CFAP65Q6ZU64 1925 aaKnown RBP32.91■■■□□ 2.86
NDUFS3-201ENST00000263774 KANK1Q14678 1352 aa32.91■■■□□ 2.86
NDUFS3-201ENST00000263774 PTPRTO14522 1441 aa32.91■■■□□ 2.86
NDUFS3-201ENST00000263774 SPATA31D1Q6ZQQ2 1576 aa32.91■■■□□ 2.86
NDUFS3-201ENST00000263774 PLA2R1Q13018 1463 aa32.9■■■□□ 2.86
NDUFS3-201ENST00000263774 ERVK-7P63135 1459 aa32.89■■■□□ 2.86
NDUFS3-201ENST00000263774 ROCK1Q13464 1354 aa32.89■■■□□ 2.86
NDUFS3-201ENST00000263774 VWDEQ8N2E2 1590 aa32.88■■■□□ 2.85
NDUFS3-201ENST00000263774 NLRP1Q9C000 1473 aa32.88■■■□□ 2.85
NDUFS3-201ENST00000263774 ARHGAP31Q2M1Z3 1444 aa32.88■■■□□ 2.85
NDUFS3-201ENST00000263774 ITGAEP38570 1179 aa32.88■■■□□ 2.85
NDUFS3-201ENST00000263774 NCKAP5LQ9HCH0 1330 aa32.86■■■□□ 2.85
NDUFS3-201ENST00000263774 ILDR1Q86SU0 546 aaPredicted RBP32.86■■■□□ 2.85
NDUFS3-201ENST00000263774 RRBP1Q9P2E9 1410 aaKnown RBP32.85■■■□□ 2.85
NDUFS3-201ENST00000263774 LMTK2Q8IWU2 1503 aa32.84■■■□□ 2.85
NDUFS3-201ENST00000263774 PKD2Q13563 968 aa32.82■■■□□ 2.84
NDUFS3-201ENST00000263774 UGGT1Q9NYU2 1555 aa32.79■■■□□ 2.84
NDUFS3-201ENST00000263774 THEMISQ8N1K5 641 aaPredicted RBP32.76■■■□□ 2.83
NDUFS3-201ENST00000263774 EFCAB6Q5THR3 1501 aa32.73■■■□□ 2.83
NDUFS3-201ENST00000263774 CERKQ8TCT0 537 aa32.73■■■□□ 2.83
NDUFS3-201ENST00000263774 UNC13BO14795 1591 aa32.73■■■□□ 2.83
NDUFS3-201ENST00000263774 POLR1AO95602 1720 aaPredicted RBP32.71■■■□□ 2.83
NDUFS3-201ENST00000263774 FBXO41Q8TF61 875 aa32.7■■■□□ 2.83
NDUFS3-201ENST00000263774 ANKLE2Q86XL3 938 aa32.67■■■□□ 2.82
NDUFS3-201ENST00000263774 UBR1Q8IWV7 1749 aa32.67■■■□□ 2.82
NDUFS3-201ENST00000263774 NEURL4Q96JN8 1562 aa32.66■■■□□ 2.82
NDUFS3-201ENST00000263774 TET3O43151 1660 aa32.66■■■□□ 2.82
NDUFS3-201ENST00000263774 NOS1P29475 1434 aa32.64■■■□□ 2.82
NDUFS3-201ENST00000263774 LTBP4Q8N2S1 1624 aa32.64■■■□□ 2.82
NDUFS3-201ENST00000263774 SYNMO15061 1565 aa32.62■■■□□ 2.81
NDUFS3-201ENST00000263774 RPRD2Q5VT52 1461 aaKnown RBP32.62■■■□□ 2.81
NDUFS3-201ENST00000263774 GCC2Q8IWJ2 1684 aa32.62■■■□□ 2.81
NDUFS3-201ENST00000263774 PIK3C2BO00750 1634 aa32.62■■■□□ 2.81
NDUFS3-201ENST00000263774 IQGAP3Q86VI3 1631 aa32.6■■■□□ 2.81
NDUFS3-201ENST00000263774 IDI1Q13907 227 aa32.59■■■□□ 2.81
NDUFS3-201ENST00000263774 NUP155O75694 1391 aa32.58■■■□□ 2.81
NDUFS3-201ENST00000263774 ZNF335Q9H4Z2 1342 aaPredicted RBP32.58■■■□□ 2.81
NDUFS3-201ENST00000263774 MED14O60244 1454 aa32.57■■■□□ 2.8
NDUFS3-201ENST00000263774 NPHP4O75161 1426 aaPredicted RBP32.55■■■□□ 2.8
NDUFS3-201ENST00000263774 NAIPQ13075 1403 aa32.55■■■□□ 2.8
NDUFS3-201ENST00000263774 E9PCH4 1651 aa32.54■■■□□ 2.8
NDUFS3-201ENST00000263774 ARHGAP23Q9P227 1491 aa32.54■■■□□ 2.8
NDUFS3-201ENST00000263774 KDM5AP29375 1690 aaKnown RBP32.53■■■□□ 2.8
NDUFS3-201ENST00000263774 SLIT1O75093 1534 aa32.53■■■□□ 2.8
NDUFS3-201ENST00000263774 SLC52A1Q9NWF4 448 aa32.53■■■□□ 2.8
NDUFS3-201ENST00000263774 STAG3Q9UJ98 1225 aa32.53■■■□□ 2.8
NDUFS3-201ENST00000263774 IQGAP1P46940 1657 aa32.5■■■□□ 2.79
NDUFS3-201ENST00000263774 SCAF11Q99590 1463 aaKnown RBP32.48■■■□□ 2.79
NDUFS3-201ENST00000263774 LTKP29376 864 aa32.48■■■□□ 2.79
NDUFS3-201ENST00000263774 TMEM2Q9UHN6 1383 aa32.47■■■□□ 2.79
NDUFS3-201ENST00000263774 TXNDC2Q86VQ3 553 aa32.47■■■□□ 2.79
NDUFS3-201ENST00000263774 HFM1A2PYH4 1435 aa32.46■■■□□ 2.79
NDUFS3-201ENST00000263774 ADGRB3O60242 1522 aa32.46■■■□□ 2.79
NDUFS3-201ENST00000263774 IQSEC2Q5JU85 1478 aa32.43■■■□□ 2.78
NDUFS3-201ENST00000263774 EID1Q9Y6B2 187 aa32.43■■■□□ 2.78
NDUFS3-201ENST00000263774 MYO5BQ9ULV0 1848 aa32.37■■■□□ 2.77
NDUFS3-201ENST00000263774 TMEM131LA2VDJ0 1609 aa32.36■■■□□ 2.77
NDUFS3-201ENST00000263774 CPS1P31327 1500 aa32.34■■■□□ 2.77
NDUFS3-201ENST00000263774 TRIM52Q96A61 297 aa32.31■■■□□ 2.76
NDUFS3-201ENST00000263774 SPHKAPQ2M3C7 1700 aa32.31■■■□□ 2.76
NDUFS3-201ENST00000263774 CHGAP10645 457 aaKnown RBP32.3■■■□□ 2.76
NDUFS3-201ENST00000263774 STRCP1A6NGW2 1772 aa32.29■■■□□ 2.76
NDUFS3-201ENST00000263774 ZFYVE9O95405 1425 aa32.27■■■□□ 2.76
NDUFS3-201ENST00000263774 RIMS2Q9UQ26 1411 aa32.26■■■□□ 2.75
NDUFS3-201ENST00000263774 HDGFP51858 240 aaKnown RBP32.22■■■□□ 2.75
NDUFS3-201ENST00000263774 SLC4A1APQ9BWU0 796 aaKnown RBP32.2■■■□□ 2.75
NDUFS3-201ENST00000263774 UBAP1LF5GYI3 381 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms